Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.017G124400 Populus trichocarpa HOM05D001937 ORTHO05D007024 7.6e-183 643.7 314 100.0
Potri.004G091000 Populus trichocarpa HOM05D001937 ORTHO05D007024 1.1e-136 490.3 315 80.6
Sabra04G0061200 Salix brachista HOM05D001937 ORTHO05D007024 2.2e-134 482.6 315 79.0
Manes.11G123000 Manihot esculenta HOM05D001937 ORTHO05D007024 5.3e-128 461.5 313 77.3
Atru.chr12.1853 Acer truncatum HOM05D001937 ORTHO05D007024 7.0e-128 461.1 313 77.0
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 7.0e-128 461.1 313 76.7
Gorai.005G213100 Gossypium raimondii HOM05D001937 ORTHO05D007024 2.6e-127 459.1 313 76.4
Gohir.A03G167300 Gossypium hirsutum HOM05D001937 ORTHO05D007024 3.5e-127 458.8 313 76.4
QL11p024047 Quercus lobata HOM05D001937 ORTHO05D007024 4.5e-127 458.4 313 76.4
Haze_10549 Corylus avellana HOM05D001937 ORTHO05D007024 1.7e-126 456.4 313 76.0
MD07G1077100 Malus domestica HOM05D001937 ORTHO05D007024 2.2e-126 456.1 313 76.4
Ciclev10018533m.g Citrus clementina HOM05D001937 ORTHO05D007024 2.9e-126 455.7 313 75.7
FvH4_7g07120 Fragaria vesca HOM05D001937 ORTHO05D007024 3.8e-126 455.3 313 75.7
CiPaw.10G131100 Carya illinoinensis HOM05D001937 ORTHO05D007024 5.0e-126 454.9 313 76.0
Gohir.D02G190400 Gossypium hirsutum HOM05D001937 ORTHO05D007024 5.0e-126 454.9 313 75.7
Dinv10935 Davidia involucrata HOM05D001937 ORTHO05D007024 6.5e-126 454.5 313 74.8
Thecc.02G153900 Theobroma cacao HOM05D001937 ORTHO05D007024 2.5e-125 452.6 313 75.7
FAN03G1993 Fragaria x ananassa HOM05D001937 ORTHO05D007024 3.2e-125 452.2 313 75.1
COL.COLO4_33143 Corchorus olitorius HOM05D001937 ORTHO05D007024 4.2e-125 451.8 313 75.4
FAN06G4695 Fragaria x ananassa HOM05D001937 ORTHO05D007024 4.2e-125 451.8 313 75.4
FAN01G0178 Fragaria x ananassa HOM05D001937 ORTHO05D007024 7.2e-125 451.1 313 74.8
RcHm_v2.0_Chr1g0337071 Rosa chinensis HOM05D001937 ORTHO05D007024 7.2e-125 451.1 313 75.4
Prupe.2G098100 Prunus persica HOM05D001937 ORTHO05D007024 1.2e-124 450.3 313 75.4
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 2.7e-124 449.1 306 76.5
CsaV3_6G000030 Cucumis sativus L. HOM05D001937 ORTHO05D007024 1.0e-123 447.2 311 74.6
TWI12G0886 Tripterygium wilfordii HOM05D001937 ORTHO05D007024 4.0e-123 445.3 314 74.2
Duzib132G1189 Durio zibethinus HOM05D001937 ORTHO05D007024 8.8e-123 444.1 313 74.4
MELO3C021250.2 Cucumis melo HOM05D001937 ORTHO05D007024 2.0e-122 443.0 311 74.3
Oeu029564.1 Olea europaea HOM05D001937 ORTHO05D007024 3.3e-122 442.2 313 73.2
Hma1.2p1_0587F.1_g184190 Hydrangea macrophylla HOM05D001937 ORTHO05D007024 7.5e-122 441.0 313 73.8
CSS0034620 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 9.7e-122 440.7 312 73.1
Lj1P823T23 Lonicera japonica HOM05D001937 ORTHO05D007024 2.2e-121 439.5 312 73.7
SalBow1G8218 Salvia bowleyana HOM05D001937 ORTHO05D007024 2.2e-121 439.5 312 74.0
CSS0040995 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 2.8e-121 439.1 312 72.8
Peaxi162Scf00165g01826 Petunia axillaris HOM05D001937 ORTHO05D007024 2.8e-121 439.1 312 71.8
Cpa.g.sc41.77 Carica papaya HOM05D001937 ORTHO05D007024 4.8e-121 438.3 313 72.5
Eucgr.I01066 Eucalyptus grandis HOM05D001937 ORTHO05D007024 2.4e-120 436.0 312 73.4
Cc09_g08410 Coffea canephora HOM05D001937 ORTHO05D007024 3.1e-120 435.6 313 72.8
Nitab4.5_0000761g0030 Nicotiana tabacum HOM05D001937 ORTHO05D007024 3.1e-120 435.6 312 72.1
Rhsim09G0056700 Rhododendron simsii HOM05D001937 ORTHO05D007024 5.3e-120 434.9 306 73.9
CANSAT01G0692 Cannabis sativa HOM05D001937 ORTHO05D007024 7.0e-120 434.5 313 73.8
CAN.G97.40 Capsicum annuum HOM05D001937 ORTHO05D007024 9.1e-120 434.1 312 72.4
PSO017G7212 Papaver somniferum HOM05D001937 ORTHO05D007024 1.2e-119 433.7 313 72.5
Sed0024188 Sechium edule HOM05D001937 ORTHO05D007024 1.6e-119 433.3 313 70.9
PGSC0003DMG400008847 Solanum tuberosum HOM05D001937 ORTHO05D007024 2.0e-119 433.0 312 72.1
Aa31LG9G17330 Aethionema arabicum HOM05D001937 ORTHO05D007024 3.5e-119 432.2 313 72.2
Sopen09g005280 Solanum pennellii HOM05D001937 ORTHO05D007024 3.5e-119 432.2 312 71.8
PSO478G1455 Papaver somniferum HOM05D001937 ORTHO05D007024 4.5e-119 431.8 313 72.2
MSTRG.3701 Avicennia marina HOM05D001937 ORTHO05D007024 5.9e-119 431.4 313 72.5
Duzib248G1173 Durio zibethinus HOM05D001937 ORTHO05D007024 7.7e-119 431.0 313 71.9
Migut.N00430 Erythranthe guttata HOM05D001937 ORTHO05D007024 7.7e-119 431.0 312 73.1
Solyc09g010560.3 Solanum lycopersicum HOM05D001937 ORTHO05D007024 7.7e-119 431.0 312 71.5
THA.LOC104823845 Tarenaya hassleriana HOM05D001937 ORTHO05D007024 1.0e-118 430.6 305 74.4
Nitab4.5_0004091g0060 Nicotiana tabacum HOM05D001937 ORTHO05D007024 2.2e-118 429.5 312 71.5
Carub.0007s3301 Capsella rubella HOM05D001937 ORTHO05D007024 5.0e-118 428.3 313 71.6
Sp7g04200 Schrenkiella parvula HOM05D001937 ORTHO05D007024 5.0e-118 428.3 313 71.6
DCAR_003140 Daucus carota HOM05D001937 ORTHO05D007024 6.5e-118 427.9 313 71.9
AT5G37830 Arabidopsis thaliana HOM05D001937 ORTHO05D007024 1.1e-117 427.2 313 71.9
BcaB02g08024 Brassica carinata HOM05D001937 ORTHO05D007024 1.1e-117 427.2 313 71.2
CARHR214920 Cardamine hirsuta HOM05D001937 ORTHO05D007024 1.1e-117 427.2 313 71.9
AL7G46730 Arabidopsis lyrata HOM05D001937 ORTHO05D007024 1.5e-117 426.8 313 71.9
MBI05_g10862_MAGBIO Magnolia biondii HOM05D001937 ORTHO05D007024 1.5e-117 426.8 317 71.0
Aqoxy4G02972 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 1.9e-117 426.4 313 70.9
A07p19500 Brassica napus HOM05D001937 ORTHO05D007024 1.9e-117 426.4 313 71.2
BraA07t29656Z Brassica rapa HOM05D001937 ORTHO05D007024 1.9e-117 426.4 313 71.2
BolC6t36984H Brassica oleracea HOM05D001937 ORTHO05D007024 2.5e-117 426.0 313 71.2
Glyma.08G069400 Glycine max HOM05D001937 ORTHO05D007024 2.5e-117 426.0 313 71.6
Medtr4g093870 Medicago truncatula HOM05D001937 ORTHO05D007024 2.5e-117 426.0 314 71.7
BcaC08g44352 Brassica carinata HOM05D001937 ORTHO05D007024 4.2e-117 425.2 313 71.2
C06p17940 Brassica napus HOM05D001937 ORTHO05D007024 4.2e-117 425.2 313 71.2
Thhalv10027622m.g Eutrema salsugineum HOM05D001937 ORTHO05D007024 9.4e-117 424.1 313 71.2
Lj4g0006057 Lotus japonicus HOM05D001937 ORTHO05D007024 9.4e-117 424.1 312 70.8
AUR62008924 Chenopodium quinoa HOM05D001937 ORTHO05D007024 2.7e-116 422.5 313 70.3
HanXRQChr10g0312981 Helianthus annuus HOM05D001937 ORTHO05D007024 3.6e-116 422.2 312 70.5
Lalb_Chr16g0382831 Lupinus albus HOM05D001937 ORTHO05D007024 3.6e-116 422.2 313 70.6
Ca_18373_v3 Cicer arietinum L. HOM05D001937 ORTHO05D007024 4.7e-116 421.8 313 70.9
Ah.08g214380 Amaranthus hybridus HOM05D001937 ORTHO05D007024 6.1e-116 421.4 312 68.9
AUR62001097 Chenopodium quinoa HOM05D001937 ORTHO05D007024 6.1e-116 421.4 313 70.3
Aqoxy2G01413 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 8.0e-116 421.0 313 70.3
VMungo0251G0821 Vigna mungo HOM05D001937 ORTHO05D007024 8.0e-116 421.0 313 70.9
Sc14g0006180 Simmondsia chinensis HOM05D001937 ORTHO05D007024 5.2e-115 418.3 313 70.3
Os01g0966000 Oryza sativa ssp. japonica HOM05D001937 ORTHO05D007024 1.2e-114 417.2 313 71.9
Phvul.002G211700 Phaseolus vulgaris HOM05D001937 ORTHO05D007024 2.0e-114 416.4 313 70.6
Dinv02213 Davidia involucrata HOM05D001937 ORTHO05D007024 2.6e-114 416.0 288 74.7
ClCG05G003000 Citrullus lanatus HOM05D001937 ORTHO05D007024 4.4e-114 415.2 295 73.9
ATR0559G108 Amborella trichopoda HOM05D001937 ORTHO05D007024 9.8e-114 414.1 311 69.1
arahy.Tifrunner.gnm1.ann1.EYG9NG Arachis hypogaea HOM05D001937 ORTHO05D007024 1.7e-113 413.3 312 69.2
EL10Ac7g17851 Beta vulgaris HOM05D001937 ORTHO05D007024 1.7e-113 413.3 313 69.3
Lsat_1_v5_gn_6_11080 Lactuca sativa HOM05D001937 ORTHO05D007024 3.7e-113 412.1 318 67.9
unitig_0.g658 Utricularia gibba HOM05D001937 ORTHO05D007024 4.8e-113 411.8 311 68.8
ECA233G4596 Erigeron canadensis HOM05D001937 ORTHO05D007024 5.4e-112 408.3 306 70.3
ATR0559G369 Amborella trichopoda HOM05D001937 ORTHO05D007024 9.1e-112 407.5 311 68.2
SEGI_01532 Sequoiadendron giganteum HOM05D001937 ORTHO05D007024 4.5e-111 405.2 311 68.5
CDE07G0097 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 1.3e-110 403.7 314 67.8
Actinidia06125 Actinidia chinensis HOM05D001937 ORTHO05D007024 1.7e-110 403.3 285 74.0
Pp3c19_22940 Physcomitrium patens HOM05D001937 ORTHO05D007024 3.8e-110 402.1 312 68.3
TAR636G0878 Trochodendron aralioides HOM05D001937 ORTHO05D007024 8.5e-110 401.0 282 74.1
TPR.G2837 Trifolium pratense HOM05D001937 ORTHO05D007024 1.9e-109 399.8 312 67.3
PGR142G3997 Punica granatum HOM05D001937 ORTHO05D007024 2.5e-109 399.4 312 69.6
Zm00001eb021240 Zea mays HOM05D001937 ORTHO05D007024 9.4e-109 397.5 306 68.6
Nn2g12806 Nelumbo nucifera HOM05D001937 ORTHO05D007024 1.6e-108 396.7 292 70.5
CDE04G1916 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 2.7e-108 396.0 314 66.2
arahy.Tifrunner.gnm1.ann1.TT5FZ7 Arachis hypogaea HOM05D001937 ORTHO05D007024 4.7e-108 395.2 314 66.6
Mapoly0035s0055 Marchantia polymorpha HOM05D001937 ORTHO05D007024 4.7e-108 395.2 311 66.9
MD02G1239500 Malus domestica HOM05D001937 ORTHO05D007024 2.3e-107 392.9 285 71.6
SHI12658 Sapria himalayana HOM05D001937 ORTHO05D007024 5.2e-107 391.7 312 65.7
SMO147G0274 Selaginella moellendorffii HOM05D001937 ORTHO05D007024 2.5e-101 372.9 311 65.0
AagrBONN_evm.TU.Sc2ySwM_368.2008 Anthoceros agrestis HOM05D001937 ORTHO05D007024 5.6e-101 371.7 289 67.8
Lalb_Chr05g0217681 Lupinus albus HOM05D001937 ORTHO05D007024 9.2e-96 354.4 312 61.5
Actinidia11252 Actinidia chinensis HOM05D001937 ORTHO05D007024 1.2e-90 337.4 313 59.7
MCO14G182 Micromonas commoda HOM05D001937 ORTHO05D007024 9.5e-85 317.8 314 55.1
Aqoxy2G01407 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 1.6e-79 300.4 205 75.1
GSVIVG01034203001 Vitis vinifera HOM05D001937 ORTHO05D007024 8.4e-73 278.1 227 66.1
CBR_g26059 Chara braunii HOM05D001937 ORTHO05D007024 2.3e-70 270.0 235 61.3
Cfa025426 Carpinus fangiana HOM05D001937 ORTHO05D007024 2.5e-69 266.5 341 48.4
Cre07.g325748 Chlamydomonas reinhardtii HOM05D001937 ORTHO05D007024 2.1e-68 263.5 311 49.8
PRCOL_00004137 Prasinoderma coloniale HOM05D001937 ORTHO05D007024 9.3e-48 194.9 268 42.2
SGA_v2.0_scaffold14G07136 Striga asiatica HOM05D001937 ORTHO05D007024 1.6e-44 184.1 165 63.6
Psat7g100640 Pisum sativum HOM05D001937 ORTHO05D007024 1.6e-39 167.5 132 67.4
TAR636G3286 Trochodendron aralioides HOM05D001937 ORTHO05D043971 1.3e-30 137.9 117 63.2
TAR636G2433 Trochodendron aralioides HOM05D001937 ORTHO05D007024 3.8e-25 119.8 95 66.3
VMungo0251G0025 Vigna mungo HOM05D001937 ORTHO05D007024 6.5e-25 119.0 193 41.5
CBR_g39219 Chara braunii HOM05D001937 ORTHO05D043971 3.6e-15 86.7 99 49.5


User provided reference genes

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