Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.017G123900 Populus trichocarpa HOM05D002536 ORTHO05D006290 1.0e-210 736.5 370 100.0
Sabra17G0102100 Salix brachista HOM05D002536 ORTHO05D006290 1.7e-178 629.4 356 90.2
Sabra17G0104800 Salix brachista HOM05D002536 ORTHO05D006290 2.5e-177 625.5 430 77.9
Manes.01G115300 Manihot esculenta HOM05D002536 ORTHO05D006290 2.4e-167 592.4 356 82.0
TWI74G1499 Tripterygium wilfordii HOM05D002536 ORTHO05D006290 4.6e-155 551.6 368 73.6
Dinv19005 Davidia involucrata HOM05D002536 ORTHO05D006290 6.0e-155 551.2 356 76.1
Ciclev10011939m.g Citrus clementina HOM05D002536 ORTHO05D006290 1.8e-154 549.7 356 77.2
Actinidia15923 Actinidia chinensis HOM05D002536 ORTHO05D006290 1.9e-153 546.2 356 74.7
MD09G1261000 Malus domestica HOM05D002536 ORTHO05D006290 8.1e-152 540.8 356 75.3
Prupe.3G158200 Prunus persica HOM05D002536 ORTHO05D006290 3.1e-151 538.9 356 75.0
GSVIVG01030877001 Vitis vinifera HOM05D002536 ORTHO05D006290 9.0e-151 537.3 356 75.0
Atru.chr4.1673 Acer truncatum HOM05D002536 ORTHO05D006290 2.0e-150 536.2 356 75.3
Cfa007855 Carpinus fangiana HOM05D002536 ORTHO05D006290 3.4e-150 535.4 369 71.3
COL.COLO4_15704 Corchorus olitorius HOM05D002536 ORTHO05D006290 3.5e-147 525.4 356 71.6
LjContig00141g0005291 Lotus japonicus HOM05D002536 ORTHO05D006290 1.3e-146 523.5 367 70.3
CiPaw.04G045800 Carya illinoinensis HOM05D002536 ORTHO05D006290 2.3e-146 522.7 356 71.6
PGR004G1192 Punica granatum HOM05D002536 ORTHO05D006290 2.3e-146 522.7 361 69.3
Eucgr.F02817 Eucalyptus grandis HOM05D002536 ORTHO05D006290 8.7e-146 520.8 356 70.5
THA.LOC104805600 Tarenaya hassleriana HOM05D002536 ORTHO05D006290 1.5e-145 520.0 356 70.8
FvH4_1g30040 Fragaria vesca HOM05D002536 ORTHO05D006290 1.3e-144 516.9 367 70.0
RcHm_v2.0_Chr3g0492101 Rosa chinensis HOM05D002536 ORTHO05D006290 3.7e-144 515.4 367 70.3
TAR371G0457 Trochodendron aralioides HOM05D002536 ORTHO05D006290 1.8e-143 513.1 356 69.9
CANSAT78G2192 Cannabis sativa HOM05D002536 ORTHO05D006290 2.4e-143 512.7 356 70.5
Gohir.A08G052800 Gossypium hirsutum HOM05D002536 ORTHO05D006290 2.4e-143 512.7 356 71.3
Gorai.004G064600 Gossypium raimondii HOM05D002536 ORTHO05D006290 3.1e-143 512.3 356 71.1
Medtr5g079770 Medicago truncatula HOM05D002536 ORTHO05D006290 9.0e-143 510.8 367 67.8
Glyma.02G247400 Glycine max HOM05D002536 ORTHO05D006290 1.5e-142 510.0 356 70.2
FAN19G0538 Fragaria x ananassa HOM05D002536 ORTHO05D006290 4.5e-142 508.4 355 71.5
Ca_05868_v3 Cicer arietinum L. HOM05D002536 ORTHO05D006290 1.0e-141 507.3 356 70.2
MBI16_g05920_MAGBIO Magnolia biondii HOM05D002536 ORTHO05D006290 1.3e-141 506.9 356 68.8
Gohir.D08G062400 Gossypium hirsutum HOM05D002536 ORTHO05D006290 2.2e-141 506.1 356 70.5
QL11p004402 Quercus lobata HOM05D002536 ORTHO05D006290 7.1e-140 501.1 426 60.8
Rhsim10G0079100 Rhododendron simsii HOM05D002536 ORTHO05D006290 7.1e-140 501.1 356 70.2
FAN28G1150 Fragaria x ananassa HOM05D002536 ORTHO05D006290 9.3e-140 500.7 355 70.1
Thecc.04G122200 Theobroma cacao HOM05D002536 ORTHO05D006290 1.2e-139 500.4 367 67.6
BcaB03g15263 Brassica carinata HOM05D002536 ORTHO05D006290 2.7e-139 499.2 368 67.1
Cc07_g08220 Coffea canephora HOM05D002536 ORTHO05D006290 2.7e-139 499.2 368 68.2
CsaV3_1G043810 Cucumis sativus L. HOM05D002536 ORTHO05D006290 2.7e-139 499.2 367 68.1
Oeu047421.1 Olea europaea HOM05D002536 ORTHO05D006290 2.7e-139 499.2 356 68.8
HanXRQChr11g0325221 Helianthus annuus HOM05D002536 ORTHO05D006290 3.5e-139 498.8 368 66.6
EL10Ac2g04489 Beta vulgaris HOM05D002536 ORTHO05D006290 1.0e-138 497.3 356 67.4
Psat2g045240 Pisum sativum HOM05D002536 ORTHO05D006290 1.3e-138 496.9 367 66.8
arahy.Tifrunner.gnm1.ann1.DT5JRU Arachis hypogaea HOM05D002536 ORTHO05D006290 1.8e-138 496.5 381 65.9
BraA07t30972Z Brassica rapa HOM05D002536 ORTHO05D006290 1.8e-138 496.5 368 67.4
arahy.Tifrunner.gnm1.ann1.3WSI1D Arachis hypogaea HOM05D002536 ORTHO05D006290 2.3e-138 496.1 382 65.7
A07p33460 Brassica napus HOM05D002536 ORTHO05D006290 3.0e-138 495.7 368 67.1
AL2G23020 Arabidopsis lyrata HOM05D002536 ORTHO05D006290 5.1e-138 495.0 367 66.2
Sp5g21560 Schrenkiella parvula HOM05D002536 ORTHO05D006290 1.5e-137 493.4 367 66.8
Phvul.008G233500 Phaseolus vulgaris HOM05D002536 ORTHO05D006290 1.9e-137 493.0 367 67.0
Sed0021694 Sechium edule HOM05D002536 ORTHO05D006290 1.9e-137 493.0 367 67.0
Duzib211G0581 Durio zibethinus HOM05D002536 ORTHO05D006290 2.5e-137 492.7 356 69.4
Thhalv10018669m.g Eutrema salsugineum HOM05D002536 ORTHO05D006290 5.7e-137 491.5 367 66.5
Aqoxy3G04016 Aquilegia oxysepala HOM05D002536 ORTHO05D006290 7.4e-137 491.1 357 66.4
Lalb_Chr04g0251281 Lupinus albus HOM05D002536 ORTHO05D006290 1.3e-136 490.3 367 65.7
Ah.10g037990 Amaranthus hybridus HOM05D002536 ORTHO05D006290 2.8e-136 489.2 356 66.3
BcaC08g46049 Brassica carinata HOM05D002536 ORTHO05D006290 8.2e-136 487.6 368 66.0
AT1G66510 Arabidopsis thaliana HOM05D002536 ORTHO05D006290 4.1e-135 485.3 367 65.1
VMungo0647G1217 Vigna mungo HOM05D002536 ORTHO05D006290 4.1e-135 485.3 369 66.4
Hund13689 Selenicereus undatus HOM05D002536 ORTHO05D006290 5.3e-135 485.0 356 67.1
CARHR058490 Cardamine hirsuta HOM05D002536 ORTHO05D006290 1.5e-134 483.4 367 65.1
BolC6t39073H Brassica oleracea HOM05D002536 ORTHO05D006290 3.4e-134 482.3 368 65.8
Carub.0002s1253 Capsella rubella HOM05D002536 ORTHO05D006290 3.4e-134 482.3 367 65.4
Lsat_1_v5_gn_4_154740 Lactuca sativa HOM05D002536 ORTHO05D006290 4.5e-134 481.9 367 64.9
Migut.L00470 Erythranthe guttata HOM05D002536 ORTHO05D006290 1.0e-133 480.7 357 66.4
MELO3C020300.2 Cucumis melo HOM05D002536 ORTHO05D006290 6.5e-133 478.0 368 64.9
Lj4A178G42 Lonicera japonica HOM05D002536 ORTHO05D006290 1.9e-132 476.5 437 57.9
C06p39850 Brassica napus HOM05D002536 ORTHO05D006290 9.4e-132 474.2 368 64.7
Sc11g0008590 Simmondsia chinensis HOM05D002536 ORTHO05D006290 1.2e-131 473.8 332 69.0
Nn3g18196 Nelumbo nucifera HOM05D002536 ORTHO05D006290 3.6e-131 472.2 356 65.4
ECA232G3521 Erigeron canadensis HOM05D002536 ORTHO05D006290 3.9e-130 468.8 356 64.0
PSO017G6098 Papaver somniferum HOM05D002536 ORTHO05D006290 6.7e-130 468.0 357 65.3
CAN.G625.81 Capsicum annuum HOM05D002536 ORTHO05D006290 8.8e-130 467.6 356 64.9
Lalb_Chr04g0249391 Lupinus albus HOM05D002536 ORTHO05D006290 1.1e-129 467.2 351 65.8
DCAR_022460 Daucus carota HOM05D002536 ORTHO05D006290 2.0e-129 466.5 350 64.6
PGSC0003DMG400030643 Solanum tuberosum HOM05D002536 ORTHO05D006290 2.5e-129 466.1 356 64.9
SGA_v2.0_scaffold329G48866 Striga asiatica HOM05D002536 ORTHO05D006290 3.3e-129 465.7 367 63.2
Sopen02g035950 Solanum pennellii HOM05D002536 ORTHO05D006290 9.7e-129 464.2 356 65.2
Glyma.14G068800 Glycine max HOM05D002536 ORTHO05D006290 8.2e-128 461.1 324 69.4
Nitab4.5_0004399g0050 Nicotiana tabacum HOM05D002536 ORTHO05D006290 1.8e-127 459.9 371 61.5
Os04g0132300 Oryza sativa ssp. japonica HOM05D002536 ORTHO05D006290 9.1e-127 457.6 363 61.7
Nitab4.5_0002248g0030 Nicotiana tabacum HOM05D002536 ORTHO05D006290 6.5e-125 451.4 332 66.0
Aa31LG2G3150 Aethionema arabicum HOM05D002536 ORTHO05D006290 1.1e-124 450.7 351 63.2
vmacro05501 Vaccinium macrocarpon HOM05D002536 ORTHO05D006290 3.0e-122 442.6 479 52.0
Haze_14213 Corylus avellana HOM05D002536 ORTHO05D008091 5.1e-122 441.8 369 62.1
Zm00001eb088880 Zea mays HOM05D002536 ORTHO05D006290 1.2e-118 430.6 352 59.9
CSS0023678 Camellia sinensis var. sinensis HOM05D002536 ORTHO05D006290 1.6e-115 420.2 407 57.0
CDE04G0829 Ceratophyllum demersum HOM05D002536 ORTHO05D006290 1.7e-112 410.2 333 60.4
AUR62023197 Chenopodium quinoa HOM05D002536 ORTHO05D006290 2.5e-108 396.4 351 57.8
AUR62023246 Chenopodium quinoa HOM05D002536 ORTHO05D006290 8.8e-106 387.9 356 56.7
Peaxi162Scf00803g00527 Petunia axillaris HOM05D002536 ORTHO05D006290 9.8e-105 384.4 274 69.3
Solyc02g091330.4 Solanum lycopersicum HOM05D002536 ORTHO05D006290 1.3e-104 384.0 285 66.3
SalBow7G0143 Salvia bowleyana HOM05D002536 ORTHO05D006290 1.4e-98 364.0 279 64.5
FAN28G0504 Fragaria x ananassa HOM05D002536 ORTHO05D006290 8.6e-93 344.7 271 66.1
unitig_32.g11881 Utricularia gibba HOM05D002536 ORTHO05D006290 8.6e-93 344.7 363 50.7
Pp3c15_1450 Physcomitrium patens HOM05D002536 ORTHO05D006290 1.6e-91 340.5 358 50.6
AagrBONN_evm.TU.Sc2ySwM_344.4243 Anthoceros agrestis HOM05D002536 ORTHO05D006290 2.0e-89 333.6 363 47.7
Cpa.g.sc116.21 Carica papaya HOM05D002536 ORTHO05D006290 3.2e-87 326.2 222 71.6
SMO196G0007 Selaginella moellendorffii HOM05D002536 ORTHO05D006290 6.6e-85 318.5 372 46.5
ATR0686G028 Amborella trichopoda HOM05D002536 ORTHO05D006290 3.6e-75 286.2 257 55.3
Ca_05898_v3 Cicer arietinum L. HOM05D002536 ORTHO05D006290 6.2e-75 285.4 215 67.0
QL11p004257 Quercus lobata HOM05D002536 ORTHO05D006290 6.8e-74 282.0 201 70.1
AagrBONN_evm.TU.Sc2ySwM_368.3391 Anthoceros agrestis HOM05D002536 ORTHO05D006290 2.9e-72 276.6 371 41.5
TPR.G3505 Trifolium pratense HOM05D002536 ORTHO05D006290 8.6e-69 265.0 200 67.0
CBR_g28641 Chara braunii HOM05D002536 ORTHO05D006290 3.3e-68 263.1 443 36.3
MSTRG.3529 Avicennia marina HOM05D002536 ORTHO05D006290 1.7e-61 240.7 195 62.6
Mapoly0209s0005 Marchantia polymorpha HOM05D002536 ORTHO05D006290 2.4e-58 230.3 295 42.4
QL11p004418 Quercus lobata HOM05D002536 ORTHO05D006290 2.0e-41 174.1 137 65.7
Cre05.g244750 Chlamydomonas reinhardtii HOM05D002536 ORTHO05D006290 1.9e-36 157.5 431 26.5
Cpa.g.sc116.20 Carica papaya HOM05D002536 ORTHO05D006290 1.2e-33 148.3 106 67.9
TPR.G3492 Trifolium pratense HOM05D002536 ORTHO05D006290 1.7e-32 144.4 104 65.4
TPR.G39323 Trifolium pratense HOM05D002536 ORTHO05D006290 2.7e-30 137.1 80 81.2
VMungo0464G1199 Vigna mungo HOM05D002536 ORTHO05D006290 3.3e-28 130.2 79 79.7
TPR.G18743 Trifolium pratense HOM05D002536 ORTHO05D006290 1.6e-27 127.9 173 42.8
TPR.G4379 Trifolium pratense HOM05D002536 ORTHO05D006290 9.0e-26 122.1 182 36.3
TPR.G3477 Trifolium pratense HOM05D002536 ORTHO05D006290 9.3e-23 112.1 255 33.7
TPR.G3463 Trifolium pratense HOM05D002536 ORTHO05D006290 7.4e-20 102.4 129 45.0
SEGI_34356 Sequoiadendron giganteum HOM05D002536 ORTHO05D006290 9.7e-20 102.1 69 68.1
FAN28G2473 Fragaria x ananassa HOM05D002536 ORTHO05D006290 1.3e-19 101.7 60 78.3
TPR.G15212 Trifolium pratense HOM05D002536 ORTHO05D006290 2.0e-17 94.4 71 60.6
QL11p004025 Quercus lobata HOM05D002536 ORTHO05D006290 3.4e-17 93.6 85 51.8
Gohir.A10G143300 Gossypium hirsutum HOM05D002536 ORTHO05D006290 4.6e-14 83.2 82 54.9
TPR.G22657 Trifolium pratense HOM05D002536 ORTHO05D006290 7.9e-14 82.4 54 75.9
Gohir.A09G155300 Gossypium hirsutum HOM05D002536 ORTHO05D006290 1.0e-13 82.0 82 54.9
Gohir.A07G193350 Gossypium hirsutum HOM05D002536 ORTHO05D006290 2.3e-13 80.9 82 53.7
Gohir.A08G229450 Gossypium hirsutum HOM05D002536 ORTHO05D006290 2.3e-13 80.9 82 53.7
Gohir.A12G000900 Gossypium hirsutum HOM05D002536 ORTHO05D006290 2.3e-13 80.9 82 53.7
TPR.G5666 Trifolium pratense HOM05D002536 ORTHO05D006290 2.3e-13 80.9 73 60.3
Gohir.D02G177580 Gossypium hirsutum HOM05D002536 ORTHO05D006290 3.0e-13 80.5 82 51.2
Gohir.D06G126066 Gossypium hirsutum HOM05D002536 ORTHO05D006290 9.7e-12 75.5 44 77.3
Gorai.010G146900 Gossypium raimondii HOM05D002536 ORTHO05D006290 2.2e-11 74.3 54 63.0
Gorai.004G103000 Gossypium raimondii HOM05D002536 ORTHO05D006290 3.7e-11 73.6 59 61.0
Gohir.D04G118901 Gossypium hirsutum HOM05D002536 ORTHO05D006290 4.8e-11 73.2 44 75.0
TPR.G25728 Trifolium pratense HOM05D002536 ORTHO05D006290 1.8e-10 71.2 131 34.4
Gohir.D02G126132 Gossypium hirsutum HOM05D002536 ORTHO05D006290 2.4e-10 70.9 59 59.3
QL11p004209 Quercus lobata HOM05D002536 ORTHO05D006290 1.2e-09 68.6 48 60.4
SEGI_27826 Sequoiadendron giganteum HOM05D002536 ORTHO05D006290 8.5e-08 62.4 65 43.1
AL2G24330 Arabidopsis lyrata HOM05D002536 ORTHO05D006290 7.9e-06 55.8 34 79.4


User provided reference genes

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