Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.017G115350 Populus trichocarpa HOM05D006950 ORTHO05D008798 2.4e-60 235.3 123 100.0
Potri.004G099300 Populus trichocarpa HOM05D006950 ORTHO05D008798 8.8e-18 94.0 70 70.0
Sabra04G0080700 Salix brachista HOM05D006950 ORTHO05D008798 1.7e-16 89.7 71 69.0
Manes.02G068900 Manihot esculenta HOM05D006950 ORTHO05D008798 1.3e-13 80.1 61 63.9
QL02p051313 Quercus lobata HOM05D006950 ORTHO05D008798 5.5e-12 74.7 60 65.0
CiPaw.04G042300 Carya illinoinensis HOM05D006950 ORTHO05D008798 1.6e-11 73.2 60 61.7
Haze_14155 Corylus avellana HOM05D006950 ORTHO05D008798 1.6e-11 73.2 60 65.0
Atru.chr1.1690 Acer truncatum HOM05D006950 ORTHO05D008798 4.7e-11 71.6 64 62.5
Dinv33949 Davidia involucrata HOM05D006950 ORTHO05D008798 4.7e-11 71.6 64 62.5
Nitab4.5_0000659g0020 Nicotiana tabacum HOM05D006950 ORTHO05D008798 6.1e-11 71.2 82 48.8
Ciclev10012146m.g Citrus clementina HOM05D006950 ORTHO05D008798 1.4e-10 70.1 51 68.6
Nitab4.5_0000912g0220 Nicotiana tabacum HOM05D006950 ORTHO05D008798 1.4e-10 70.1 82 50.0
Cfa007922 Carpinus fangiana HOM05D006950 ORTHO05D008798 2.3e-10 69.3 57 64.9
Thecc.04G133400 Theobroma cacao HOM05D006950 ORTHO05D008798 2.3e-10 69.3 50 66.0
Cpa.g.sc282.6 Carica papaya HOM05D006950 ORTHO05D008798 3.0e-10 68.9 62 62.9
TAR629G2916 Trochodendron aralioides HOM05D006950 ORTHO05D008798 3.9e-10 68.6 56 60.7
Prupe.3G142000 Prunus persica HOM05D006950 ORTHO05D008798 6.7e-10 67.8 68 54.4
Duzib138G1034 Durio zibethinus HOM05D006950 ORTHO05D008798 1.1e-09 67.0 51 64.7
Gohir.A11G163600 Gossypium hirsutum HOM05D006950 ORTHO05D008798 1.7e-08 63.2 48 64.6
Gorai.007G181600 Gossypium raimondii HOM05D006950 ORTHO05D008798 1.7e-08 63.2 48 64.6
CSS0013921 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 2.8e-08 62.4 74 41.9
Hma1.2p1_0136F.1_g062250 Hydrangea macrophylla HOM05D006950 ORTHO05D008798 4.8e-08 61.6 64 57.8
Gohir.D11G169900 Gossypium hirsutum HOM05D006950 ORTHO05D008798 6.3e-08 61.2 48 62.5
MD17G1244700 Malus domestica HOM05D006950 ORTHO05D008798 6.3e-08 61.2 77 48.1
ECA246G0391 Erigeron canadensis HOM05D006950 ORTHO05D008798 8.2e-08 60.8 63 55.6
Lj4A191T50 Lonicera japonica HOM05D006950 ORTHO05D008798 1.1e-07 60.5 69 47.8
CsaV3_1G032300 Cucumis sativus L. HOM05D006950 ORTHO05D008798 1.4e-07 60.1 55 56.4
CSS0023207 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 1.8e-07 59.7 69 42.0
Aqoxy3G00267 Aquilegia oxysepala HOM05D006950 ORTHO05D008798 2.4e-07 59.3 71 46.5
ClCG03G006740 Citrullus lanatus HOM05D006950 ORTHO05D008798 2.4e-07 59.3 52 57.7
Lsat_1_v5_gn_3_79740 Lactuca sativa HOM05D006950 ORTHO05D008798 2.4e-07 59.3 52 55.8
DCAR_017190 Daucus carota HOM05D006950 ORTHO05D008798 3.1e-07 58.9 52 57.7
Peaxi162Scf00394g00061 Petunia axillaris HOM05D006950 ORTHO05D008798 3.1e-07 58.9 55 50.9
Thhalv10027821m.g Eutrema salsugineum HOM05D006950 ORTHO05D008798 4.1e-07 58.5 58 55.2
AL686U10010 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 5.3e-07 58.2 53 54.7
AL7G52300 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 5.3e-07 58.2 53 54.7
EL10Ac2g04564 Beta vulgaris HOM05D006950 ORTHO05D008798 5.3e-07 58.2 91 46.2
Cc07_g08790 Coffea canephora HOM05D006950 ORTHO05D008798 5.3e-07 58.2 40 70.0
Aa31LG9G17120 Aethionema arabicum HOM05D006950 ORTHO05D008798 7.0e-07 57.8 54 51.9
MELO3C002748.2 Cucumis melo HOM05D006950 ORTHO05D008798 7.0e-07 57.8 55 54.5
PGR142G3639 Punica granatum HOM05D006950 ORTHO05D008798 7.0e-07 57.8 44 65.9
Hund13713 Selenicereus undatus HOM05D006950 ORTHO05D008798 7.0e-07 57.8 90 43.3
CANSAT78G2296 Cannabis sativa HOM05D006950 ORTHO05D008798 2.0e-06 56.2 70 47.1
CAN.G625.25 Capsicum annuum HOM05D006950 ORTHO05D008798 2.0e-06 56.2 43 62.8
HanXRQChr15g0471491 Helianthus annuus HOM05D006950 ORTHO05D008798 2.0e-06 56.2 61 52.5
MBI16_g34414_MAGBIO Magnolia biondii HOM05D006950 ORTHO05D008798 2.0e-06 56.2 53 58.5
Actinidia36323 Actinidia chinensis HOM05D006950 ORTHO05D008798 2.6e-06 55.8 71 47.9
Nn3g17880 Nelumbo nucifera HOM05D006950 ORTHO05D008798 4.5e-06 55.1 44 61.4
TWI53G1811 Tripterygium wilfordii HOM05D006950 ORTHO05D008798 5.9e-06 54.7 56 55.4


User provided reference genes

Program Settings