Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.017G115002 Populus trichocarpa HOM05D008372 ORTHO05D010559 6.5e-28 126.7 66 100.0
Thecc.04G133800 Theobroma cacao HOM05D008372 ORTHO05D010559 1.1e-11 72.8 62 69.4
COL.COLO4_09329 Corchorus olitorius HOM05D008372 ORTHO05D010559 1.9e-11 72.0 62 66.1
Atru.chr1.1698 Acer truncatum HOM05D008372 ORTHO05D010559 4.3e-11 70.9 62 67.7
PGSC0003DMG400024192 Solanum tuberosum HOM05D008372 ORTHO05D010559 2.1e-10 68.6 62 66.1
Sopen02g014250 Solanum pennellii HOM05D008372 ORTHO05D010559 2.8e-10 68.2 62 64.5
CSS0004693 Camellia sinensis var. sinensis HOM05D008372 ORTHO05D010559 8.0e-10 66.6 62 62.9
CSS0035068 Camellia sinensis var. sinensis HOM05D008372 ORTHO05D010559 8.0e-10 66.6 62 62.9
Solyc02g063180.4 Solanum lycopersicum HOM05D008372 ORTHO05D010559 8.0e-10 66.6 62 64.5
Ciclev10013657m.g Citrus clementina HOM05D008372 ORTHO05D010559 1.0e-09 66.2 62 64.5
CAN.G225.5 Capsicum annuum HOM05D008372 ORTHO05D010559 1.8e-09 65.5 62 62.9
Prupe.8G147100 Prunus persica HOM05D008372 ORTHO05D010559 3.1e-09 64.7 62 61.3
Peaxi162Scf00501g00319 Petunia axillaris HOM05D008372 ORTHO05D010559 2.0e-08 62.0 62 61.3
Cpa.g.sc282.9 Carica papaya HOM05D008372 ORTHO05D010559 2.6e-08 61.6 62 58.1
Nitab4.5_0004398g0020 Nicotiana tabacum HOM05D008372 ORTHO05D010559 2.6e-08 61.6 62 59.7
GSVIVG01031022001 Vitis vinifera HOM05D008372 ORTHO05D010559 2.6e-08 61.6 62 58.1
Actinidia36321 Actinidia chinensis HOM05D008372 ORTHO05D010559 3.4e-08 61.2 62 56.5
QL02p051398 Quercus lobata HOM05D008372 ORTHO05D010559 3.4e-08 61.2 62 58.1
Rhsim10G0067200 Rhododendron simsii HOM05D008372 ORTHO05D010559 3.4e-08 61.2 61 59.0
Dinv34822 Davidia involucrata HOM05D008372 ORTHO05D010559 7.5e-08 60.1 62 58.1
Gohir.A07G173100 Gossypium hirsutum HOM05D008372 ORTHO05D010559 7.5e-08 60.1 62 58.1
CANSAT78G1437 Cannabis sativa HOM05D008372 ORTHO05D010559 1.3e-07 59.3 62 53.2
CANSAT78G1639 Cannabis sativa HOM05D008372 ORTHO05D010559 1.3e-07 59.3 62 53.2
Cfa007923 Carpinus fangiana HOM05D006225 ORTHO05D010559 1.3e-07 59.3 62 58.1
TAR629G0699 Trochodendron aralioides HOM05D008372 ORTHO05D010559 1.3e-07 59.3 62 59.7
Nitab4.5_0001217g0010 Nicotiana tabacum HOM05D008372 ORTHO05D010559 1.7e-07 58.9 62 58.1
Gohir.D07G181100 Gossypium hirsutum HOM05D008372 ORTHO05D010559 2.2e-07 58.5 62 56.5
Gorai.001G202000 Gossypium raimondii HOM05D008372 ORTHO05D010559 2.2e-07 58.5 62 56.5
PGR004G0240 Punica granatum HOM05D008372 ORTHO05D010559 8.3e-07 56.6 62 53.2
HPP92_024422 Vanilla planifolia HOM05D008372 ORTHO05D010559 1.4e-06 55.8 61 55.7
SGA_v2.0_scaffold329G48876 Striga asiatica HOM05D008372 ORTHO05D010559 1.9e-06 55.5 62 50.0


User provided reference genes

Program Settings