Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.017G108500 Populus trichocarpa HOM05D002873 ORTHO05D002978 3.1e-28 128.3 92 100.0
Potri.017G108400 Populus trichocarpa HOM05D002873 ORTHO05D002978 1.8e-12 75.9 92 55.4
Potri.017G108300 Populus trichocarpa HOM05D002873 ORTHO05D002978 5.4e-12 74.3 92 58.7
Potri.017G108350 Populus trichocarpa HOM05D002873 ORTHO05D002978 5.4e-12 74.3 92 58.7
Haze_14075 Corylus avellana HOM05D002873 ORTHO05D002978 1.2e-11 73.2 92 50.0
arahy.Tifrunner.gnm1.ann1.4T36CH Arachis hypogaea HOM05D002873 ORTHO05D002978 2.7e-11 72.0 89 49.4
arahy.Tifrunner.gnm1.ann1.JTM1YJ Arachis hypogaea HOM05D002873 ORTHO05D002978 2.7e-11 72.0 89 49.4
Sabra17G0091100 Salix brachista HOM05D002873 ORTHO05D002978 2.7e-11 72.0 113 60.2
RcHm_v2.0_Chr2g0163991 Rosa chinensis HOM05D002873 ORTHO05D002978 3.5e-11 71.6 90 46.7
TWI34G1371 Tripterygium wilfordii HOM05D002873 ORTHO05D002978 7.8e-11 70.5 92 46.7
Prupe.3G244200 Prunus persica HOM05D002873 ORTHO05D002978 1.3e-10 69.7 92 45.7
Prupe.3G244300 Prunus persica HOM05D002873 ORTHO05D002978 1.3e-10 69.7 92 45.7
Prupe.3G244100 Prunus persica HOM05D002873 ORTHO05D002978 2.3e-10 68.9 92 45.7
Prupe.3G244600 Prunus persica HOM05D002873 ORTHO05D002978 2.3e-10 68.9 92 45.7
Lalb_Chr04g0258251 Lupinus albus HOM05D002873 ORTHO05D002978 2.9e-10 68.6 88 45.5
THA.LOC109117084 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 2.9e-10 68.6 92 43.5
Prupe.3G244500 Prunus persica HOM05D002873 ORTHO05D002978 3.8e-10 68.2 92 44.6
MD09G1079600 Malus domestica HOM05D002873 ORTHO05D002978 8.6e-10 67.0 92 45.7
Prupe.3G244400 Prunus persica HOM05D002873 ORTHO05D002978 1.1e-09 66.6 92 43.5
Peaxi162Scf00479g00055 Petunia axillaris HOM05D002873 ORTHO05D002978 2.5e-09 65.5 90 44.4
Prupe.3G244700 Prunus persica HOM05D002873 ORTHO05D002978 2.5e-09 65.5 91 44.0
CsaV3_5G038880 Cucumis sativus L. HOM05D002873 ORTHO05D002978 5.6e-09 64.3 92 53.3
A02p10830 Brassica napus HOM05D002873 ORTHO05D002978 1.6e-08 62.8 92 42.4
BraA02t06145Z Brassica rapa HOM05D002873 ORTHO05D002978 1.6e-08 62.8 92 42.4
Glyma.08G255700 Glycine max HOM05D002873 ORTHO05D002978 1.6e-08 62.8 85 44.7
Ca_06717_v3 Cicer arietinum L. HOM05D002873 ORTHO05D002978 3.6e-08 61.6 85 42.4
Sabra04G0074600 Salix brachista HOM05D002873 ORTHO05D002978 3.6e-08 61.6 92 48.9
BcaC03g14385 Brassica carinata HOM05D002873 ORTHO05D002978 4.7e-08 61.2 92 41.3
C02p17950 Brassica napus HOM05D002873 ORTHO05D002978 4.7e-08 61.2 92 41.3
BolC2t07926H Brassica oleracea HOM05D002873 ORTHO05D002978 4.7e-08 61.2 92 41.3
Peaxi162Scf00479g00065 Petunia axillaris HOM05D002873 ORTHO05D002978 6.1e-08 60.8 90 42.2
Sed0008680 Sechium edule HOM05D002873 ORTHO05D002978 6.1e-08 60.8 92 42.4
Hund13793 Selenicereus undatus HOM05D002873 ORTHO05D002978 6.1e-08 60.8 91 45.1
MELO3C022078.2 Cucumis melo HOM05D002873 ORTHO05D002978 8.0e-08 60.5 92 53.3
Cpa.g.sc188.26 Carica papaya HOM05D002873 ORTHO05D002978 1.0e-07 60.1 93 49.5
Eucgr.I02095 Eucalyptus grandis HOM05D002873 ORTHO05D002978 2.3e-07 58.9 92 40.2
Sed0011149 Sechium edule HOM05D002873 ORTHO05D002978 3.0e-07 58.5 90 42.2
THA.LOC109116670 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 3.0e-07 58.5 41 68.3
Dinv36852 Davidia involucrata HOM05D002873 ORTHO05D002978 4.0e-07 58.2 91 44.0
FAN09G3043 Fragaria x ananassa HOM05D002873 ORTHO05D002978 4.0e-07 58.2 90 44.4
Medtr7g018280 Medicago truncatula HOM05D002873 ORTHO05D002978 4.0e-07 58.2 97 55.7
CsaV3_5G004620 Cucumis sativus L. HOM05D002873 ORTHO05D002978 5.2e-07 57.8 92 45.7
Dinv38615 Davidia involucrata HOM05D002873 ORTHO05D002978 5.2e-07 57.8 91 42.9
FvH4_6g45800 Fragaria vesca HOM05D002873 ORTHO05D002978 5.2e-07 57.8 39 71.8
FAN02G0494 Fragaria x ananassa HOM05D002873 ORTHO05D002978 5.2e-07 57.8 89 39.3
FAN09G4276 Fragaria x ananassa HOM05D002873 ORTHO05D002978 5.2e-07 57.8 39 71.8
FAN14G0065 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.2e-07 57.8 39 71.8
GSVIVG01036492001 Vitis vinifera HOM05D002873 ORTHO05D002978 5.2e-07 57.8 88 39.8
THA.LOC109116088 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 6.8e-07 57.4 92 40.2
CARHR288730 Cardamine hirsuta HOM05D002873 ORTHO05D002978 8.9e-07 57.0 85 43.5
Sabra04G0074500 Salix brachista HOM05D002873 ORTHO05D002978 8.9e-07 57.0 92 50.0
Sopen02g034300 Solanum pennellii HOM05D002873 ORTHO05D002978 8.9e-07 57.0 90 37.8
RcHm_v2.0_Chr2g0164011 Rosa chinensis HOM05D002873 ORTHO05D002978 1.5e-06 56.2 92 47.8
Haze_17643 Corylus avellana HOM05D002873 ORTHO05D002978 2.6e-06 55.5 90 38.9
Dinv33894 Davidia involucrata HOM05D002873 ORTHO05D002978 4.4e-06 54.7 90 36.7
Aqoxy6G00630 Aquilegia oxysepala HOM05D002873 ORTHO05D002978 7.5e-06 53.9 90 40.0
EL10Ac2g04705 Beta vulgaris HOM05D002873 ORTHO05D002978 7.5e-06 53.9 90 40.0
Sc11g0008050 Simmondsia chinensis HOM05D002873 ORTHO05D002978 7.5e-06 53.9 90 45.6
CsaV3_5G004610 Cucumis sativus L. HOM05D002873 ORTHO05D002978 9.8e-06 53.5 92 45.7
Migut.H00555 Erythranthe guttata HOM05D002873 ORTHO05D002978 9.8e-06 53.5 86 38.4


User provided reference genes

Program Settings