Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.017G106200 Populus trichocarpa HOM05D006288 ORTHO05D007416 5.2e-53 211.1 131 100.0
Sabra17G0089200 Salix brachista HOM05D006288 ORTHO05D007416 5.1e-40 167.9 92 93.5
Gohir.D12G056100 Gossypium hirsutum HOM05D006288 ORTHO05D007416 2.5e-31 139.0 115 65.2
Gorai.008G059200 Gossypium raimondii HOM05D006288 ORTHO05D007416 2.5e-31 139.0 115 65.2
Duzib133G0644 Durio zibethinus HOM05D006288 ORTHO05D007416 4.3e-31 138.3 115 65.2
Duzib133G1254 Durio zibethinus HOM05D006288 ORTHO05D007416 4.3e-31 138.3 115 65.2
arahy.Tifrunner.gnm1.ann1.J0I6JM Arachis hypogaea HOM05D006288 ORTHO05D007416 7.4e-31 137.5 127 57.5
Gohir.A12G056700 Gossypium hirsutum HOM05D006288 ORTHO05D007416 1.3e-30 136.7 115 64.3
Cfa007713 Carpinus fangiana HOM05D006288 ORTHO05D007416 8.1e-30 134.0 120 61.7
Lj3g0015520 Lotus japonicus HOM05D006288 ORTHO05D007416 1.1e-29 133.7 120 60.0
Lalb_Chr21g0318141 Lupinus albus HOM05D006288 ORTHO05D007416 1.1e-29 133.7 117 59.8
Manes.01G106000 Manihot esculenta HOM05D006288 ORTHO05D007416 1.1e-29 133.7 127 59.1
Thecc.10G108100 Theobroma cacao HOM05D005170 ORTHO05D007416 1.1e-29 133.7 125 60.0
Ca_13697_v3 Cicer arietinum L. HOM05D006288 ORTHO05D007416 1.8e-29 132.9 120 60.0
Prupe.3G247000 Prunus persica HOM05D006288 ORTHO05D007416 1.8e-29 132.9 121 60.3
vmacro18118 Vaccinium macrocarpon HOM05D006288 ORTHO05D007416 5.3e-29 131.3 115 60.0
CiPaw.03G081300 Carya illinoinensis HOM05D006288 ORTHO05D007416 6.9e-29 131.0 121 61.2
Dinv34894 Davidia involucrata HOM05D006288 ORTHO05D007416 9.0e-29 130.6 118 60.2
GSVIVG01036516001 Vitis vinifera HOM05D006288 ORTHO05D007416 1.2e-28 130.2 110 62.7
Phvul.004G044700 Phaseolus vulgaris HOM05D006288 ORTHO05D007416 1.5e-28 129.8 115 60.9
Rhsim10G0068900 Rhododendron simsii HOM05D006288 ORTHO05D007416 1.5e-28 129.8 115 60.0
TWI60G1717 Tripterygium wilfordii HOM05D006288 ORTHO05D007416 1.5e-28 129.8 122 59.0
VMungo0464G1523 Vigna mungo HOM05D006288 ORTHO05D007416 2.0e-28 129.4 116 58.6
TPR.G14566 Trifolium pratense HOM05D006288 ORTHO05D007416 2.6e-28 129.0 114 61.4
Glyma.19G037000 Glycine max HOM05D006288 ORTHO05D007416 3.4e-28 128.6 116 59.5
Glyma.13G051400 Glycine max HOM05D006288 ORTHO05D007416 4.5e-28 128.3 116 59.5
FAN14G1171 Fragaria x ananassa HOM05D006288 ORTHO05D007416 5.8e-28 127.9 123 70.7
Rhsim08G0078400 Rhododendron simsii HOM05D006288 ORTHO05D007416 5.8e-28 127.9 115 58.3
Cpa.g.sc14.255 Carica papaya HOM05D006288 ORTHO05D007416 7.6e-28 127.5 122 57.4
Atru.chr8.595 Acer truncatum HOM05D006288 ORTHO05D007416 9.9e-28 127.1 119 55.5
Oeu007090.1 Olea europaea HOM05D006288 ORTHO05D007416 9.9e-28 127.1 109 62.4
RcHm_v2.0_Chr2g0164421 Rosa chinensis HOM05D006288 ORTHO05D007416 1.7e-27 126.3 111 60.4
MELO3C018910.2 Cucumis melo HOM05D006288 ORTHO05D007416 2.2e-27 125.9 116 74.1
CsaV3_4G009920 Cucumis sativus L. HOM05D006288 ORTHO05D007416 2.2e-27 125.9 116 56.9
PSO210G6985 Papaver somniferum HOM05D006288 ORTHO05D007416 2.2e-27 125.9 116 56.9
PSO832G2920 Papaver somniferum HOM05D006288 ORTHO05D007416 2.2e-27 125.9 116 57.8
Sc11g0008960 Simmondsia chinensis HOM05D006288 ORTHO05D007416 2.2e-27 125.9 121 55.4
CSS0015874 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 2.9e-27 125.6 121 57.9
CSS0028097 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 2.9e-27 125.6 121 57.9
Cc07_g04640 Coffea canephora HOM05D006288 ORTHO05D007416 3.8e-27 125.2 116 59.5
TAR629G2245 Trochodendron aralioides HOM05D006288 ORTHO05D007416 3.8e-27 125.2 122 57.4
Migut.K00879 Erythranthe guttata HOM05D006288 ORTHO05D007416 4.9e-27 124.8 109 59.6
Medtr3g034300 Medicago truncatula HOM05D006288 ORTHO05D007416 4.9e-27 124.8 114 58.8
Nn4g23570 Nelumbo nucifera HOM05D006288 ORTHO05D007416 4.9e-27 124.8 109 77.1
Psat5g210920 Pisum sativum HOM05D006288 ORTHO05D007416 6.4e-27 124.4 114 58.8
Hma1.2p1_0304F.1_g119265 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 8.4e-27 124.0 117 58.1
Hma1.2p1_0304F.1_g119270 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 8.4e-27 124.0 117 58.1
Psat5g212400 Pisum sativum HOM05D006288 ORTHO05D007416 8.4e-27 124.0 124 54.8
Hund16253 Selenicereus undatus HOM05D006288 ORTHO05D007416 8.4e-27 124.0 118 57.6
MD09G1077100 Malus domestica HOM05D006288 ORTHO05D007416 1.1e-26 123.6 118 57.6
QL09p029462 Quercus lobata HOM05D006288 ORTHO05D007416 1.1e-26 123.6 112 58.9
PSO675G0562 Papaver somniferum HOM05D006288 ORTHO05D007416 1.4e-26 123.2 116 56.0
CSS0016762 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 1.9e-26 122.9 117 56.4
CSS0047986 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 1.9e-26 122.9 117 56.4
ClCG07G016140 Citrullus lanatus HOM05D006288 ORTHO05D007416 1.9e-26 122.9 116 72.4
CAN.G93.47 Capsicum annuum HOM05D006288 ORTHO05D007416 3.2e-26 122.1 118 71.2
Actinidia26277 Actinidia chinensis HOM05D006288 ORTHO05D007416 4.2e-26 121.7 110 74.5
Psat5g210840 Pisum sativum HOM05D006288 ORTHO05D007416 4.2e-26 121.7 110 58.2
MD17G1067500 Malus domestica HOM05D006288 ORTHO05D007416 7.1e-26 120.9 110 58.2
PSO541G1058 Papaver somniferum HOM05D006288 ORTHO05D007416 1.2e-25 120.2 111 58.6
SGA_v2.0_scaffold30G12393 Striga asiatica HOM05D006288 ORTHO05D007416 1.2e-25 120.2 110 58.2
Peaxi162Scf00019g00316 Petunia axillaris HOM05D006288 ORTHO05D007416 1.6e-25 119.8 109 58.7
CSS0029131 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 2.1e-25 119.4 129 54.3
PGR004G0851 Punica granatum HOM05D006288 ORTHO05D007416 2.1e-25 119.4 115 56.5
Manes.02G062500 Manihot esculenta HOM05D006288 ORTHO05D007416 2.7e-25 119.0 108 57.4
SalBow7G0779 Salvia bowleyana HOM05D006288 ORTHO05D007416 3.5e-25 118.6 109 59.6
PGSC0003DMG400026550 Solanum tuberosum HOM05D006288 ORTHO05D007416 3.5e-25 118.6 116 56.0
Solyc02g065690.3 Solanum lycopersicum HOM05D006288 ORTHO05D007416 4.6e-25 118.2 116 56.0
Sopen02g015910 Solanum pennellii HOM05D006288 ORTHO05D007416 4.6e-25 118.2 125 52.8
Sed0021882 Sechium edule HOM05D006288 ORTHO05D007416 6.0e-25 117.9 88 69.3
THA.LOC104805112 Tarenaya hassleriana HOM05D006288 ORTHO05D007416 6.0e-25 117.9 117 54.7
Ah.16g100880 Amaranthus hybridus HOM05D006288 ORTHO05D007416 1.3e-24 116.7 120 54.2
FAN10G3625 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.8e-24 116.3 84 67.9
Nitab4.5_0003203g0060 Nicotiana tabacum HOM05D006288 ORTHO05D007416 1.8e-24 116.3 109 56.9
CANSAT64G2264 Cannabis sativa HOM05D005170 ORTHO05D007416 2.3e-24 115.9 89 68.5
Eucgr.F02878 Eucalyptus grandis HOM05D006288 ORTHO05D007416 3.0e-24 115.5 113 57.5
unitig_32.g10759 Utricularia gibba HOM05D006288 ORTHO05D007416 5.1e-24 114.8 120 53.3
FAN09G1057 Fragaria x ananassa HOM05D010582 ORTHO05D007416 6.7e-24 114.4 128 68.0
Actinidia17612 Actinidia chinensis HOM05D006288 ORTHO05D007416 1.1e-23 113.6 91 62.6
Carub.0008s0943 Capsella rubella HOM05D006288 ORTHO05D007416 1.5e-23 113.2 117 62.4
FAN02G0987 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.5e-23 113.2 123 69.9
Lsat_1_v5_gn_4_173980 Lactuca sativa HOM05D006288 ORTHO05D007416 1.9e-23 112.8 110 70.9
ATR0691G027 Amborella trichopoda HOM05D006288 ORTHO05D007416 2.5e-23 112.5 108 52.8
ECA232G4388 Erigeron canadensis HOM05D006288 ORTHO05D007416 7.4e-23 110.9 109 71.6
FAN05G5526 Fragaria x ananassa HOM05D006288 ORTHO05D007416 7.4e-23 110.9 76 72.4
EL10Ac2g04409 Beta vulgaris HOM05D006288 ORTHO05D007416 1.3e-22 110.2 80 68.8
AUR62023135 Chenopodium quinoa HOM05D006288 ORTHO05D007416 1.3e-22 110.2 90 62.2
Aa31LG7G12050 Aethionema arabicum HOM05D006288 ORTHO05D007416 1.6e-22 109.8 118 61.0
SEGI_23755 Sequoiadendron giganteum HOM05D006288 ORTHO05D007416 1.6e-22 109.8 121 46.3
Lsat_1_v5_gn_4_174040 Lactuca sativa HOM05D006288 ORTHO05D007416 4.8e-22 108.2 110 51.8
FAN10G2886 Fragaria x ananassa HOM05D006288 ORTHO05D007416 6.2e-22 107.8 82 63.4
FvH4_6g46100 Fragaria vesca HOM05D006288 ORTHO05D007416 1.1e-21 107.1 70 75.7
TAR371G0310 Trochodendron aralioides HOM05D006288 ORTHO05D007416 1.8e-21 106.3 81 64.2
BraA06t26742Z Brassica rapa HOM05D006288 ORTHO05D007416 3.1e-21 105.5 80 66.2
C07p39960 Brassica napus HOM05D006288 ORTHO05D007416 5.3e-21 104.8 78 66.7
BolC7t44529H Brassica oleracea HOM05D006288 ORTHO05D007416 9.0e-21 104.0 78 65.4
Os02g0190900 Oryza sativa ssp. japonica HOM05D006288 ORTHO05D007416 1.2e-20 103.6 112 51.8
Thhalv10005135m.g Eutrema salsugineum HOM05D006288 ORTHO05D007416 2.6e-20 102.4 74 67.6
Sp2g19860 Schrenkiella parvula HOM05D006288 ORTHO05D007416 2.6e-20 102.4 111 65.8
A09p04890 Brassica napus HOM05D006288 ORTHO05D007416 3.4e-20 102.1 111 67.6
BraA09t36127Z Brassica rapa HOM05D006288 ORTHO05D007416 3.4e-20 102.1 111 67.6
CDE10G0042 Ceratophyllum demersum HOM05D006288 ORTHO05D007416 5.8e-20 101.3 80 61.2
Zm00001eb234970 Zea mays HOM05D006288 ORTHO05D007416 5.8e-20 101.3 108 50.0
CARHR287980 Cardamine hirsuta HOM05D006288 ORTHO05D007416 7.6e-20 100.9 112 65.2
BcaC04g23731 Brassica carinata HOM05D006288 ORTHO05D007416 1.3e-19 100.1 71 69.0
C09p05280 Brassica napus HOM05D006288 ORTHO05D007416 1.3e-19 100.1 71 69.0
AT5G49550 Arabidopsis thaliana HOM05D006288 ORTHO05D007416 1.7e-19 99.8 112 65.2
BcaB04g19620 Brassica carinata HOM05D006288 ORTHO05D007416 2.9e-19 99.0 73 65.8
AL8G23340 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 4.9e-19 98.2 114 64.0
AL954U10010 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 6.5e-19 97.8 72 66.7
FvH4_6g24710 Fragaria vesca HOM05D006288 ORTHO05D007416 1.4e-18 96.7 59 78.0
FAN14G4004 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.4e-18 96.7 59 78.0
HPP92_018391 Vanilla planifolia HOM05D006288 ORTHO05D007416 1.4e-18 96.7 109 50.5
Atru.BG.156.p Acer truncatum HOM05D006288 ORTHO05D007416 3.2e-18 95.5 66 68.2
HanXRQChr15g0464891 Helianthus annuus HOM05D006288 ORTHO05D007416 9.3e-18 94.0 97 71.1
Eucgr.K01979 Eucalyptus grandis HOM05D006288 ORTHO05D007416 1.9e-15 86.3 80 65.0
SHI46878 Sapria himalayana HOM05D006288 ORTHO05D007416 3.7e-14 82.0 72 51.4
COL.COLO4_00228 Corchorus olitorius HOM05D006288 ORTHO05D007416 1.4e-13 80.1 80 55.0
Nitab4.5_0002249g0090 Nicotiana tabacum HOM05D006288 ORTHO05D007416 5.3e-13 78.2 73 54.8
DCAR_011002 Daucus carota HOM05D006288 ORTHO05D007416 2.6e-12 75.9 80 52.5
Pp3c21_3840 Physcomitrium patens HOM05D006288 ORTHO05D007416 2.6e-12 75.9 78 48.7
AagrBONN_evm.TU.Sc2ySwM_344.2644 Anthoceros agrestis HOM05D006288 ORTHO05D007416 2.9e-11 72.4 117 34.2
Hma1.2p1_2186F.1_g316383 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 3.8e-11 72.0 73 50.7
Hma1.2p1_3488F.1_g336360 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 3.8e-11 72.0 73 50.7
Mapoly0015s0174 Marchantia polymorpha HOM05D006288 ORTHO05D007416 1.9e-10 69.7 78 43.6
Haze_03283 Corylus avellana HOM05D002280 ORTHO05D002322 4.2e-10 68.6 44 75.0
Psat6g174640 Pisum sativum HOM05D006288 ORTHO05D007416 3.5e-09 65.5 44 70.5
SMO358G0122 Selaginella moellendorffii HOM05D006288 ORTHO05D007416 4.8e-06 55.1 97 30.9


User provided reference genes

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