Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.017G096500 Populus trichocarpa HOM05D010262 ORTHO05D010379 1.5e-56 222.6 111 100.0
Potri.017G095700 Populus trichocarpa HOM05D010262 ORTHO05D010379 8.1e-47 190.3 111 85.6
Potri.017G096300 Populus trichocarpa HOM05D010262 ORTHO05D010379 8.1e-47 190.3 111 85.6
Potri.017G098100 Populus trichocarpa HOM05D010262 ORTHO05D010379 3.1e-46 188.3 111 84.7
Sabra17G0084700 Salix brachista HOM05D010262 ORTHO05D010379 1.5e-40 169.5 111 76.6
SabraUnG0001200 Salix brachista HOM05D010262 ORTHO05D010379 3.1e-38 161.8 107 76.6
SabraUnG0001300 Salix brachista HOM05D010262 ORTHO05D010379 3.1e-38 161.8 107 74.8
SabraUnG0001500 Salix brachista HOM05D010262 ORTHO05D010379 3.1e-38 161.8 107 76.6
SabraUnG0001100 Salix brachista HOM05D010262 ORTHO05D010379 2.0e-37 159.1 107 73.8
SabraUnG0001000 Salix brachista HOM05D010262 ORTHO05D010379 2.6e-29 132.1 82 82.9
SabraUnG0001400 Salix brachista HOM05D010262 ORTHO05D010379 2.6e-29 132.1 82 82.9
Potri.017G098300 Populus trichocarpa HOM05D010262 ORTHO05D010379 9.6e-24 113.6 58 87.9
Ciclev10013129m.g Citrus clementina HOM05D010262 ORTHO05D010379 9.0e-14 80.5 90 53.3
Gohir.A07G079500 Gossypium hirsutum HOM05D010262 ORTHO05D010379 7.6e-13 77.4 103 47.6
Gorai.001G090600 Gossypium raimondii HOM05D013261 ORTHO05D010379 1.0e-12 77.0 103 47.6
Gohir.D07G084800 Gossypium hirsutum HOM05D013261 ORTHO05D010379 2.2e-12 75.9 103 46.6
COL.COLO4_04719 Corchorus olitorius HOM05D013261 ORTHO05D010379 5.0e-12 74.7 99 46.5
QL02p066431 Quercus lobata HOM05D010262 ORTHO05D010379 9.4e-11 70.5 94 46.8
QL02p066467 Quercus lobata HOM05D010262 ORTHO05D010379 9.4e-11 70.5 94 46.8
Duzib211G0483 Durio zibethinus HOM05D013261 ORTHO05D010379 1.6e-10 69.7 94 44.7
Thecc.04G102500 Theobroma cacao HOM05D013261 ORTHO05D010379 1.6e-10 69.7 101 47.5
THA.LOC104825761 Tarenaya hassleriana HOM05D009762 ORTHO05D010379 1.4e-09 66.6 66 51.5
CiPaw.03G087100 Carya illinoinensis HOM05D010262 ORTHO05D010379 1.8e-09 66.2 93 47.3
Manes.01G102300 Manihot esculenta HOM05D010262 ORTHO05D010379 3.9e-09 65.1 99 41.4
Manes.01G102000 Manihot esculenta HOM05D010262 ORTHO05D010379 1.1e-08 63.5 101 41.6
Aa31LG2G3830 Aethionema arabicum HOM05D009762 ORTHO05D010379 2.5e-08 62.4 62 45.2
Cfa021135 Carpinus fangiana HOM05D010262 ORTHO05D010379 4.3e-08 61.6 98 44.9
Nitab4.5_0005596g0090 Nicotiana tabacum HOM05D014301 ORTHO05D016872 1.3e-07 60.1 107 41.1
BcaC03g17591 Brassica carinata HOM05D009762 ORTHO05D010379 1.7e-07 59.7 63 44.4
A02p36720 Brassica napus HOM05D009762 ORTHO05D010379 1.7e-07 59.7 63 44.4
Thecc.04G102300 Theobroma cacao HOM05D016410 ORTHO05D010379 1.7e-07 59.7 45 57.8
BolC2t11635H Brassica oleracea HOM05D000224 ORTHO05D001489 2.2e-07 59.3 62 45.2
C02p55770 Brassica napus HOM05D009762 ORTHO05D010379 2.8e-07 58.9 73 43.8
BolC2t11630H Brassica oleracea HOM05D009762 ORTHO05D010379 2.8e-07 58.9 73 43.8
BraA02t08666Z Brassica rapa HOM05D000224 ORTHO05D001489 2.8e-07 58.9 59 45.8
Gohir.A07G079700 Gossypium hirsutum HOM05D016410 ORTHO05D010379 2.8e-07 58.9 45 55.6
Gohir.D07G085000 Gossypium hirsutum HOM05D016410 ORTHO05D010379 2.8e-07 58.9 45 55.6
Gorai.001G090900 Gossypium raimondii HOM05D016410 ORTHO05D010379 2.8e-07 58.9 45 55.6
BcaB07g30073 Brassica carinata HOM05D009762 ORTHO05D010379 8.2e-07 57.4 74 40.5
PGSC0003DMG400026567 Solanum tuberosum HOM05D020746 ORTHO05D023001 1.8e-06 56.2 48 45.8
COL.COLO4_04717 Corchorus olitorius HOM05D016410 ORTHO05D010379 2.4e-06 55.8 85 37.6
Manes.02G057600 Manihot esculenta HOM05D010262 ORTHO05D010379 2.4e-06 55.8 93 35.5
AT3G29780 Arabidopsis thaliana HOM05D009762 ORTHO05D010379 4.1e-06 55.1 70 40.0
Sp2g18060 Schrenkiella parvula HOM05D009762 ORTHO05D010379 5.3e-06 54.7 69 43.5
AL5G20160 Arabidopsis lyrata HOM05D009762 ORTHO05D010379 6.9e-06 54.3 115 33.0
MSTRG.3368 Avicennia marina HOM05D016393 ORTHO05D018533 9.1e-06 53.9 112 31.2


User provided reference genes

Program Settings