Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.017G093000 Populus trichocarpa HOM05D007413 ORTHO05D009357 2.1e-55 218.8 111 100.0
Sabra17G0082000 Salix brachista HOM05D007413 ORTHO05D009357 6.9e-38 160.6 109 81.7
Potri.004G119600 Populus trichocarpa HOM05D007413 ORTHO05D009357 5.3e-30 134.4 106 68.9
Manes.01G097200 Manihot esculenta HOM05D007413 ORTHO05D009357 1.2e-29 133.3 121 66.1
Cfa007655 Carpinus fangiana HOM05D007413 ORTHO05D009357 4.3e-24 114.8 117 61.5
Sabra04G0069100 Salix brachista HOM05D007413 ORTHO05D009357 1.4e-22 109.8 84 65.5
Manes.02G054200 Manihot esculenta HOM05D007413 ORTHO05D009357 1.2e-21 106.7 118 55.9
CiPaw.03G089400 Carya illinoinensis HOM05D007413 ORTHO05D009357 2.0e-21 105.9 108 55.6
CANSAT64G0406 Cannabis sativa HOM05D007413 ORTHO05D009357 3.8e-20 101.7 106 56.6
QL02p067998 Quercus lobata HOM05D007413 ORTHO05D009357 3.2e-19 98.6 123 52.0
Cc07_g04120 Coffea canephora HOM05D007413 ORTHO05D009357 2.3e-17 92.4 96 55.2
Oeu062157.1 Olea europaea HOM05D007413 ORTHO05D009357 2.3e-17 92.4 110 52.7
Hma1.2p1_0481F.1_g162070 Hydrangea macrophylla HOM05D007413 ORTHO05D009357 5.1e-17 91.3 74 67.6
Lj2g0007962 Lotus japonicus HOM05D007413 ORTHO05D009357 1.1e-16 90.1 70 64.3
FvH4_6g47010 Fragaria vesca HOM05D007413 ORTHO05D009357 1.5e-16 89.7 118 49.2
FAN14G4532 Fragaria x ananassa HOM05D007413 ORTHO05D009357 1.5e-16 89.7 118 49.2
FAN02G2783 Fragaria x ananassa HOM05D007413 ORTHO05D009357 1.9e-16 89.4 118 50.0
TPR.G10008 Trifolium pratense HOM05D007413 ORTHO05D009357 1.9e-16 89.4 98 49.0
FAN09G1793 Fragaria x ananassa HOM05D007413 ORTHO05D009357 4.3e-16 88.2 118 48.3
Phvul.004G035200 Phaseolus vulgaris HOM05D007413 ORTHO05D009357 9.7e-16 87.0 110 50.0
Nitab4.5_0000565g0230 Nicotiana tabacum HOM05D007413 ORTHO05D009357 2.8e-15 85.5 104 49.0
Solyc02g088740.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 2.8e-15 85.5 102 53.9
Aqoxy3G03598 Aquilegia oxysepala HOM05D007413 ORTHO05D009357 4.8e-15 84.7 97 48.5
Sopen02g033450 Solanum pennellii HOM05D007413 ORTHO05D009357 4.8e-15 84.7 102 53.9
CAN.G206.219 Capsicum annuum HOM05D007413 ORTHO05D009357 6.3e-15 84.3 95 52.6
FAN05G2048 Fragaria x ananassa HOM05D007413 ORTHO05D009357 6.3e-15 84.3 118 47.5
VMungo0464G1276 Vigna mungo HOM05D007413 ORTHO05D009357 1.1e-14 83.6 112 47.3
TWI34G0597 Tripterygium wilfordii HOM05D007413 ORTHO05D009357 1.4e-14 83.2 116 48.3
Psat1g067640 Pisum sativum HOM05D007413 ORTHO05D009357 2.4e-14 82.4 92 50.0
RcHm_v2.0_Chr2g0166071 Rosa chinensis HOM05D007413 ORTHO05D009357 2.4e-14 82.4 117 48.7
Glyma.13G057000 Glycine max HOM05D007413 ORTHO05D009357 3.1e-14 82.0 102 49.0
Cpa.g.sc3362.1 Carica papaya HOM05D007413 ORTHO05D009357 4.1e-14 81.6 92 51.1
MD09G1064600 Malus domestica HOM05D007413 ORTHO05D009357 4.1e-14 81.6 96 54.2
Lalb_Chr02g0158971 Lupinus albus HOM05D007413 ORTHO05D009357 5.3e-14 81.3 114 48.2
Migut.K01283 Erythranthe guttata HOM05D007413 ORTHO05D009357 9.0e-14 80.5 107 47.7
MD17G1057900 Malus domestica HOM05D007413 ORTHO05D009357 9.0e-14 80.5 110 50.0
CSS0009905 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 1.2e-13 80.1 59 72.9
CSS0018085 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 1.2e-13 80.1 59 72.9
Eucgr.I02025 Eucalyptus grandis HOM05D007413 ORTHO05D009357 1.5e-13 79.7 96 50.0
Nitab4.5_0010051g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 2.0e-13 79.3 98 50.0
Lalb_Chr06g0174991 Lupinus albus HOM05D007413 ORTHO05D009357 2.6e-13 79.0 56 69.6
Thecc.04G093400 Theobroma cacao HOM05D007413 ORTHO05D009357 2.6e-13 79.0 105 47.6
Migut.H00635 Erythranthe guttata HOM05D007413 ORTHO05D009357 3.4e-13 78.6 114 44.7
Ciclev10013609m.g Citrus clementina HOM05D007413 ORTHO05D009357 7.6e-13 77.4 119 44.5
Lsat_1_v5_gn_2_87601 Lactuca sativa HOM05D007413 ORTHO05D009357 1.0e-12 77.0 96 51.0
Nn3g17420 Nelumbo nucifera HOM05D007413 ORTHO05D009357 1.7e-12 76.3 110 46.4
Medtr6g015150 Medicago truncatula HOM05D007413 ORTHO05D009357 5.0e-12 74.7 62 59.7
Duzib147G0133 Durio zibethinus HOM05D007413 ORTHO05D009357 6.5e-12 74.3 105 46.7
Actinidia26249 Actinidia chinensis HOM05D007413 ORTHO05D009357 1.4e-11 73.2 87 50.6
MELO3C022028.2 Cucumis melo HOM05D007413 ORTHO05D009357 1.4e-11 73.2 96 46.9
Prupe.3G256400 Prunus persica HOM05D007413 ORTHO05D009357 1.4e-11 73.2 61 65.6
SalBow1G0329 Salvia bowleyana HOM05D007413 ORTHO05D009357 1.4e-11 73.2 63 58.7
ClCG07G007410 Citrullus lanatus HOM05D007413 ORTHO05D009357 2.5e-11 72.4 110 41.8
Nitab4.5_0005916g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 3.2e-11 72.0 93 45.2
SalBow1G6503 Salvia bowleyana HOM05D007413 ORTHO05D009357 5.5e-11 71.2 56 62.5
Oeu007062.1 Olea europaea HOM05D007413 ORTHO05D009357 7.2e-11 70.9 108 38.9
ClCG11G004700 Citrullus lanatus HOM05D007413 ORTHO05D009357 9.4e-11 70.5 93 46.2
COL.COLO4_00052 Corchorus olitorius HOM05D007413 ORTHO05D009357 9.4e-11 70.5 65 56.9
MELO3C024851.2 Cucumis melo HOM05D007413 ORTHO05D009357 9.4e-11 70.5 106 43.4
Lsat_1_v5_gn_4_171221 Lactuca sativa HOM05D007413 ORTHO05D009357 2.7e-10 68.9 74 54.1
SGA_v2.0_scaffold148G36473 Striga asiatica HOM05D007413 ORTHO05D009357 4.6e-10 68.2 95 44.2
Sed0019528 Sechium edule HOM05D007413 ORTHO05D009357 7.9e-10 67.4 64 57.8
Sopen02g016170 Solanum pennellii HOM05D007413 ORTHO05D009357 7.9e-10 67.4 110 41.8
CAN.G398.10 Capsicum annuum HOM05D007413 ORTHO05D009357 1.0e-09 67.0 66 48.5
PGR004G0469 Punica granatum HOM05D007413 ORTHO05D009357 1.4e-09 66.6 74 50.0
Gohir.D04G043900 Gossypium hirsutum HOM05D007413 ORTHO05D009357 1.8e-09 66.2 77 50.6
Nn4g23392 Nelumbo nucifera HOM05D007413 ORTHO05D009357 1.8e-09 66.2 106 42.5
Gorai.012G049200 Gossypium raimondii HOM05D007413 ORTHO05D009357 3.0e-09 65.5 107 40.2
Solyc02g066970.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 3.9e-09 65.1 106 37.7
Gohir.A05G371900 Gossypium hirsutum HOM05D007413 ORTHO05D009357 8.8e-09 63.9 107 39.3
Oeu010247.1 Olea europaea HOM05D007413 ORTHO05D009357 1.5e-08 63.2 87 47.1
AT5G39240 Arabidopsis thaliana HOM05D007413 ORTHO05D009357 2.5e-08 62.4 80 42.5
Lalb_Chr21g0318381 Lupinus albus HOM05D007413 ORTHO05D009357 2.5e-08 62.4 66 53.0
SGA_v2.0_scaffold52G19169 Striga asiatica HOM05D007413 ORTHO05D009357 2.5e-08 62.4 112 41.1
PGSC0003DMG400025144 Solanum tuberosum HOM05D007413 ORTHO05D009357 3.3e-08 62.0 110 39.1
BcaB06g27281 Brassica carinata HOM05D007413 ORTHO05D009357 4.3e-08 61.6 72 51.4
CSS0018963 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 5.7e-08 61.2 99 42.4
Aa31LG2G3920 Aethionema arabicum HOM05D007413 ORTHO05D009357 7.4e-08 60.8 101 36.6
Sc14g0006230 Simmondsia chinensis HOM05D007413 ORTHO05D009357 7.4e-08 60.8 63 50.8
DCAR_011043 Daucus carota HOM05D007413 ORTHO05D009357 9.7e-08 60.5 104 39.4
AL5G19460 Arabidopsis lyrata HOM05D007413 ORTHO05D009357 1.3e-07 60.1 89 40.4
Carub.0007s3668 Capsella rubella HOM05D007413 ORTHO05D009357 1.3e-07 60.1 72 44.4
Rhsim08G0074700 Rhododendron simsii HOM05D007413 ORTHO05D009357 1.7e-07 59.7 41 80.5
unitig_62.g23378 Utricularia gibba HOM05D007413 ORTHO05D009357 1.7e-07 59.7 58 53.4
BcaC02g09685 Brassica carinata HOM05D007413 ORTHO05D009357 2.8e-07 58.9 102 39.2
A04p11950 Brassica napus HOM05D007413 ORTHO05D009357 2.8e-07 58.9 71 47.9
C04p45600 Brassica napus HOM05D007413 ORTHO05D009357 2.8e-07 58.9 102 39.2
BolC4t26142H Brassica oleracea HOM05D007413 ORTHO05D009357 2.8e-07 58.9 102 39.2
BraA04t16860Z Brassica rapa HOM05D007413 ORTHO05D009357 2.8e-07 58.9 71 47.9
CARHR263170 Cardamine hirsuta HOM05D007413 ORTHO05D009357 2.8e-07 58.9 73 46.6
CDE10G0699 Ceratophyllum demersum HOM05D007413 ORTHO05D009357 6.3e-07 57.8 106 39.6
AT3G29370 Arabidopsis thaliana HOM05D007413 ORTHO05D009357 1.1e-06 57.0 93 35.5
AL7G51220 Arabidopsis lyrata HOM05D007413 ORTHO05D009357 1.8e-06 56.2 74 44.6
Thhalv10027993m.g Eutrema salsugineum HOM05D007413 ORTHO05D009357 1.8e-06 56.2 84 39.3
Sp7g02750 Schrenkiella parvula HOM05D007413 ORTHO05D009357 3.1e-06 55.5 107 36.4
Aa31LG9G16690 Aethionema arabicum HOM05D007413 ORTHO05D009357 4.1e-06 55.1 59 57.6
THA.LOC104825781 Tarenaya hassleriana HOM05D007413 ORTHO05D009357 4.1e-06 55.1 105 41.0
ATR0064G025 Amborella trichopoda HOM05D007413 ORTHO05D009357 5.3e-06 54.7 54 51.9
THA.LOC109116393 Tarenaya hassleriana HOM05D007413 ORTHO05D009357 6.9e-06 54.3 99 42.4


User provided reference genes

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