Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.017G091300 Populus trichocarpa HOM05D005427 ORTHO05D006461 1.8e-125 452.6 226 100.0
Atru.chr3.1127 Acer truncatum HOM05D005427 ORTHO05D006461 7.1e-82 307.8 228 67.1
Atru.chr3.1136 Acer truncatum HOM05D005427 ORTHO05D006461 7.1e-82 307.8 228 67.1
Ciclev10026408m.g Citrus clementina HOM05D005427 ORTHO05D006461 5.1e-80 301.6 227 67.8
QL06p037683 Quercus lobata HOM05D005427 ORTHO05D006461 1.5e-76 290.0 227 62.1
Sabra17G0080400 Salix brachista HOM05D005427 ORTHO05D006461 1.1e-74 283.9 203 76.4
TWI74G0676 Tripterygium wilfordii HOM05D005427 ORTHO05D006461 1.2e-73 280.4 223 65.0
Thecc.01G082100 Theobroma cacao HOM05D005427 ORTHO05D006461 4.6e-73 278.5 233 62.2
Dinv36993 Davidia involucrata HOM05D005427 ORTHO05D006461 6.0e-73 278.1 228 62.7
TAR628G1492 Trochodendron aralioides HOM05D001631 ORTHO05D001591 6.6e-72 274.6 233 61.4
Prupe.6G211100 Prunus persica HOM05D005427 ORTHO05D006461 2.5e-71 272.7 226 59.3
Manes.13G105100 Manihot esculenta HOM05D005427 ORTHO05D006461 1.3e-70 270.4 226 61.9
COL.COLO4_11665 Corchorus olitorius HOM05D005427 ORTHO05D006461 8.1e-70 267.7 220 60.0
GSVIVG01017423001 Vitis vinifera HOM05D005427 ORTHO05D006461 1.4e-69 266.9 236 56.4
CSS0026502 Camellia sinensis var. sinensis HOM05D005427 ORTHO05D006461 2.4e-69 266.2 233 57.5
MD15G1405500 Malus domestica HOM05D005427 ORTHO05D006461 4.0e-69 265.4 223 60.1
Gohir.A11G206966 Gossypium hirsutum HOM05D005427 ORTHO05D006461 1.2e-68 263.8 233 59.7
Gorai.007G232600 Gossypium raimondii HOM05D005427 ORTHO05D006461 8.4e-67 257.7 233 58.4
Dinv21205 Davidia involucrata HOM05D005427 ORTHO05D006461 6.0e-65 251.5 228 59.2
THA.LOC104819282 Tarenaya hassleriana HOM05D005427 ORTHO05D006461 6.0e-65 251.5 226 58.4
CSS0032221 Camellia sinensis var. sinensis HOM05D005427 ORTHO05D006461 3.0e-64 249.2 231 55.4
CiPaw.08G147100 Carya illinoinensis HOM05D005427 ORTHO05D006461 5.1e-64 248.4 228 55.7
FvH4_1g18830 Fragaria vesca HOM05D005427 ORTHO05D006461 1.1e-63 247.3 221 56.6
RcHm_v2.0_Chr2g0109701 Rosa chinensis HOM05D005427 ORTHO05D006461 1.5e-63 246.9 222 56.3
TAR376G0349 Trochodendron aralioides HOM05D005427 ORTHO05D006461 1.5e-63 246.9 233 56.2
CSS0024088 Camellia sinensis var. sinensis HOM05D005427 ORTHO05D006461 2.5e-63 246.1 231 55.0
Nn1g05775 Nelumbo nucifera HOM05D005427 ORTHO05D006461 4.3e-63 245.4 226 54.0
Rhsim07G0122400 Rhododendron simsii HOM05D005427 ORTHO05D006461 1.3e-62 243.8 237 51.1
Gohir.D11G216500 Gossypium hirsutum HOM05D005427 ORTHO05D006461 2.1e-62 243.0 229 56.3
PGR102G2470 Punica granatum HOM05D005427 ORTHO05D006461 5.3e-61 238.4 226 52.7
FAN23G0196 Fragaria x ananassa HOM05D005427 ORTHO05D006461 1.7e-59 233.4 234 52.1
Cpa.g.sc3.369 Carica papaya HOM05D005427 ORTHO05D006461 2.2e-59 233.0 228 52.2
Cfa001616 Carpinus fangiana HOM05D005427 ORTHO05D006461 6.5e-59 231.5 229 52.4
Eucgr.H02348 Eucalyptus grandis HOM05D005427 ORTHO05D006461 6.5e-59 231.5 220 52.7
ClCG09G016510 Citrullus lanatus HOM05D005427 ORTHO05D006461 9.3e-58 227.6 229 51.1
Aqoxy3G03178 Aquilegia oxysepala HOM05D005427 ORTHO05D006461 2.1e-57 226.5 228 49.6
AT3G49645 Arabidopsis thaliana HOM05D005427 ORTHO05D006461 4.6e-57 225.3 225 53.8
Migut.F01758 Erythranthe guttata HOM05D005427 ORTHO05D006461 6.0e-57 224.9 220 51.8
FAN19G1732 Fragaria x ananassa HOM05D005427 ORTHO05D006461 7.9e-57 224.6 250 49.6
RcHm_v2.0_Chr5g0054161 Rosa chinensis HOM05D005427 ORTHO05D006461 7.9e-57 224.6 222 52.7
Lalb_Chr04g0263231 Lupinus albus HOM05D005427 ORTHO05D006461 1.8e-56 223.4 223 51.1
Lj3g0020172 Lotus japonicus HOM05D005427 ORTHO05D006461 2.3e-56 223.0 229 50.2
PGSC0003DMG400012980 Solanum tuberosum HOM05D005427 ORTHO05D006461 3.0e-56 222.6 219 51.1
AL7G47510 Arabidopsis lyrata HOM05D005427 ORTHO05D006461 8.7e-56 221.1 225 52.9
Glyma.08G273000 Glycine max HOM05D005427 ORTHO05D006461 1.5e-55 220.3 233 50.2
CANSAT01G2304 Cannabis sativa HOM05D005427 ORTHO05D006461 1.9e-55 219.9 226 49.6
Sopen09g003480 Solanum pennellii HOM05D005427 ORTHO05D006461 2.5e-55 219.5 225 49.8
CAN.G1830.8 Capsicum annuum HOM05D005427 ORTHO05D006461 7.4e-55 218.0 220 50.5
Carub.0005s1599 Capsella rubella HOM05D005427 ORTHO05D006461 1.3e-54 217.2 221 50.7
Thhalv10019696m.g Eutrema salsugineum HOM05D005427 ORTHO05D006461 2.1e-54 216.5 224 50.9
Solyc09g008680.4 Solanum lycopersicum HOM05D005427 ORTHO05D006461 2.1e-54 216.5 225 49.8
CsaV3_7G007450 Cucumis sativus L. HOM05D005427 ORTHO05D006461 2.8e-54 216.1 223 47.1
Thhalv10010700m.g Eutrema salsugineum HOM05D005427 ORTHO05D006461 2.8e-54 216.1 224 51.3
Phvul.003G285200 Phaseolus vulgaris HOM05D005427 ORTHO05D006461 2.8e-54 216.1 228 50.0
Sed0018601 Sechium edule HOM05D005427 ORTHO05D006461 3.7e-54 215.7 226 46.5
Duzib264G0001 Durio zibethinus HOM05D005427 ORTHO05D006461 6.3e-54 214.9 184 59.2
vmacro07282 Vaccinium macrocarpon HOM05D005427 ORTHO05D006461 6.3e-54 214.9 231 49.4
BraA07t29893Z Brassica rapa HOM05D005427 ORTHO05D006461 4.1e-53 212.2 226 48.2
MELO3C018556.2 Cucumis melo HOM05D005427 ORTHO05D006461 5.3e-53 211.8 218 46.3
Aa31LG4G18120 Aethionema arabicum HOM05D005427 ORTHO05D006461 9.0e-53 211.1 227 49.8
Phvul.003G285800 Phaseolus vulgaris HOM05D005427 ORTHO05D006461 9.0e-53 211.1 222 49.5
A06p28350 Brassica napus HOM05D005427 ORTHO05D006461 1.5e-52 210.3 224 49.1
BraA06t25777Z Brassica rapa HOM05D005427 ORTHO05D006461 1.5e-52 210.3 224 49.1
C03p65440 Brassica napus HOM05D005427 ORTHO05D006461 2.6e-52 209.5 224 48.7
BolC3t18796H Brassica oleracea HOM05D005427 ORTHO05D006461 2.6e-52 209.5 224 48.7
BcaC01g02424 Brassica carinata HOM05D005427 ORTHO05D006461 4.5e-52 208.8 222 48.6
BcaB01g00686 Brassica carinata HOM05D005427 ORTHO05D006461 7.6e-52 208.0 225 49.8
Sp5g12450 Schrenkiella parvula HOM05D005427 ORTHO05D006461 2.2e-51 206.5 224 48.7
THA.LOC104799739 Tarenaya hassleriana HOM05D005427 ORTHO05D006461 2.9e-51 206.1 234 48.3
CARHR158680 Cardamine hirsuta HOM05D005427 ORTHO05D006461 8.4e-51 204.5 225 48.4
Haze_16903 Corylus avellana HOM05D005427 ORTHO05D006461 1.4e-50 203.8 246 45.9
AL5G29490 Arabidopsis lyrata HOM05D007023 ORTHO05D008684 5.5e-50 201.8 210 51.9
SGA_v2.0_scaffold70G23436 Striga asiatica HOM05D005427 ORTHO05D006461 1.6e-49 200.3 220 46.4
A07p22100 Brassica napus HOM05D005427 ORTHO05D006461 2.1e-49 199.9 246 44.3
Nitab4.5_0004281g0090 Nicotiana tabacum HOM05D005427 ORTHO05D006461 2.7e-49 199.5 219 46.1
SGA_v2.0_scaffold147G36350 Striga asiatica HOM05D005427 ORTHO05D006461 6.1e-49 198.4 225 44.4
ECA233G5189 Erigeron canadensis HOM05D005427 ORTHO05D006461 7.9e-49 198.0 225 44.9
SGA_v2.0_scaffold4G02171 Striga asiatica HOM05D005427 ORTHO05D006461 7.9e-49 198.0 225 44.9
TPR.G15264 Trifolium pratense HOM05D005427 ORTHO05D006461 6.7e-48 194.9 232 46.6
BcaC07g39428 Brassica carinata HOM05D005427 ORTHO05D006461 3.3e-47 192.6 224 47.8
Hund15020 Selenicereus undatus HOM05D005427 ORTHO05D006461 4.3e-47 192.2 231 44.6
vmacro05473 Vaccinium macrocarpon HOM05D005427 ORTHO05D006461 9.7e-47 191.0 260 42.3
BraA06t24896Z Brassica rapa HOM05D007023 ORTHO05D008684 1.6e-46 190.3 213 50.2
Hund13132 Selenicereus undatus HOM05D005427 ORTHO05D006461 3.7e-46 189.1 224 43.8
Sc06g0009050 Simmondsia chinensis HOM05D005427 ORTHO05D006461 4.8e-46 188.7 206 48.5
DCAR_006436 Daucus carota HOM05D005427 ORTHO05D006461 8.2e-46 188.0 205 51.2
Ah.01g015840 Amaranthus hybridus HOM05D005427 ORTHO05D006461 1.1e-45 187.6 225 45.8
MD01G1046300 Malus domestica HOM05D005427 ORTHO05D006461 1.1e-45 187.6 181 52.5
EL10Ac9g20957 Beta vulgaris HOM05D005427 ORTHO05D006461 1.4e-45 187.2 214 48.1
HanXRQChr12g0368771 Helianthus annuus HOM05D005427 ORTHO05D006461 1.4e-45 187.2 204 47.5
Psat4g120800 Pisum sativum HOM05D005427 ORTHO05D006461 2.4e-45 186.4 241 42.3
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 9.0e-45 184.5 274 40.1
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 1.5e-44 183.7 248 42.3
AUR62041740 Chenopodium quinoa HOM05D005427 ORTHO05D006461 4.5e-44 182.2 225 44.9
Hund00873 Selenicereus undatus HOM05D005427 ORTHO05D006461 4.5e-44 182.2 206 47.1
AUR62024067 Chenopodium quinoa HOM05D005427 ORTHO05D006461 5.9e-44 181.8 220 45.0
Glyma.20G162400 Glycine max HOM05D005427 ORTHO05D006461 1.7e-43 180.3 233 44.2
CDE02G2678 Ceratophyllum demersum HOM05D005427 ORTHO05D006160 2.2e-43 179.9 227 44.5
Ah.01g003640 Amaranthus hybridus HOM05D000109 ORTHO05D000520 1.1e-42 177.6 223 43.0
BolC8t50081H Brassica oleracea HOM05D007023 ORTHO05D008684 1.1e-42 177.6 212 48.1
AUR62012052 Chenopodium quinoa HOM05D005427 ORTHO05D006461 1.1e-42 177.6 220 44.1
C08p24660 Brassica napus HOM05D007023 ORTHO05D008684 2.5e-42 176.4 210 48.1
PSO761G0697 Papaver somniferum HOM05D005427 ORTHO05D006461 9.4e-42 174.5 226 42.5
Peaxi162Scf00500g00116 Petunia axillaris HOM05D005427 ORTHO05D006461 2.1e-41 173.3 203 44.3
Peaxi162Scf01051g00142 Petunia axillaris HOM05D005427 ORTHO05D006461 7.9e-41 171.4 222 42.8
BcaB02g09598 Brassica carinata HOM05D005427 ORTHO05D006461 1.1e-39 167.5 225 43.1
Medtr8g067265 Medicago truncatula HOM05D005427 ORTHO05D006461 1.3e-38 164.1 218 42.2
AUR62019836 Chenopodium quinoa HOM05D005427 ORTHO05D006461 2.8e-38 162.9 221 39.4
A06p18060 Brassica napus HOM05D007023 ORTHO05D008684 6.3e-38 161.8 213 45.1
HPP92_024834 Vanilla planifolia HOM05D005427 ORTHO05D006461 6.3e-38 161.8 222 41.0
HPP92_026626 Vanilla planifolia HOM05D005427 ORTHO05D006461 6.3e-38 161.8 222 41.0
Phvul.002G065300 Phaseolus vulgaris HOM05D005427 ORTHO05D006461 5.3e-37 158.7 174 48.3
Zm00001eb210960 Zea mays HOM05D005427 ORTHO05D006461 5.3e-37 158.7 231 36.8
Os10g0360900 Oryza sativa ssp. japonica HOM05D005427 ORTHO05D006461 3.4e-36 156.0 221 38.9
PSO210G5957 Papaver somniferum HOM05D005427 ORTHO05D006461 3.4e-36 156.0 221 40.3
Zm00001eb064010 Zea mays HOM05D005427 ORTHO05D006461 7.7e-36 154.8 253 35.2
Lsat_1_v5_gn_8_18901 Lactuca sativa HOM05D005427 ORTHO05D006461 2.9e-35 152.9 229 38.9
TWI77G0140 Tripterygium wilfordii HOM05D005427 ORTHO05D006461 2.9e-35 152.9 117 62.4
Hma1.2p1_0561F.1_g178960 Hydrangea macrophylla HOM05D005427 ORTHO05D006461 3.8e-35 152.5 126 58.7
FAN27G1155 Fragaria x ananassa HOM05D005427 ORTHO05D006461 5.0e-35 152.1 220 40.0
FAN26G2664 Fragaria x ananassa HOM05D005427 ORTHO05D006461 3.9e-32 142.5 226 40.3
Os07g0264900 Oryza sativa ssp. japonica HOM05D005427 ORTHO05D006461 4.8e-30 135.6 179 41.3
Cc09_g03000 Coffea canephora HOM05D005427 ORTHO05D006461 2.9e-27 126.3 134 53.7
Pp3c24_9930 Physcomitrium patens HOM05D005427 ORTHO05D006461 3.8e-27 125.9 221 33.0
VMungo1309G2225 Vigna mungo HOM05D005427 ORTHO05D006461 1.1e-26 124.4 133 49.6
EL10Ac6g13479 Beta vulgaris HOM05D005427 ORTHO05D006461 3.6e-25 119.4 178 39.9
AagrBONN_evm.TU.Sc2ySwM_228.2937 Anthoceros agrestis HOM05D005427 ORTHO05D006461 4.0e-24 115.9 209 30.6
Cc09_g02990 Coffea canephora HOM05D005427 ORTHO05D006461 9.7e-23 111.3 82 62.2
Nitab4.5_0006709g0040 Nicotiana tabacum HOM05D005427 ORTHO05D006461 4.8e-22 109.0 83 55.4
CSS0003252 Camellia sinensis var. sinensis HOM05D005427 ORTHO05D006461 2.4e-21 106.7 73 69.9
MBI16_g14676_MAGBIO Magnolia biondii HOM05D005427 ORTHO05D006461 9.1e-21 104.8 168 40.5
Ah.16g109230 Amaranthus hybridus HOM05D005427 ORTHO05D006461 2.7e-20 103.2 110 46.4
SMO367G1008 Selaginella moellendorffii HOM05D005427 ORTHO05D006461 3.5e-20 102.8 177 32.8
MD00G1139600 Malus domestica HOM05D005427 ORTHO05D006461 1.0e-19 101.3 58 79.3
MD04G1240700 Malus domestica HOM05D005427 ORTHO05D006461 1.0e-19 101.3 58 79.3
Carub.0005s0959 Capsella rubella HOM05D005427 ORTHO05D006461 1.7e-19 100.5 126 45.2
Rhsim10G0082400 Rhododendron simsii HOM05D005427 ORTHO05D006461 1.7e-19 100.5 64 68.8
Actinidia11934 Actinidia chinensis HOM05D005427 ORTHO05D006461 1.9e-18 97.1 123 44.7
MSTRG.375 Avicennia marina HOM05D005427 ORTHO05D006461 1.4e-16 90.9 81 54.3
MBI16_g26727_MAGBIO Magnolia biondii HOM05D005427 ORTHO05D006461 1.4e-16 90.9 110 46.4
SalBow7G4264 Salvia bowleyana HOM05D005427 ORTHO05D006461 1.7e-14 84.0 101 44.6
Mapoly0002s0147 Marchantia polymorpha HOM05D005427 ORTHO05D006461 4.5e-12 75.9 230 26.5
Mapoly0085s0034 Marchantia polymorpha HOM05D005427 ORTHO05D006461 5.0e-11 72.4 212 25.9
SEGI_00262 Sequoiadendron giganteum HOM05D005427 ORTHO05D006461 1.2e-09 67.8 71 38.0
Mapoly0028s0128 Marchantia polymorpha HOM05D005427 ORTHO05D006461 2.1e-09 67.0 222 27.0
Lsat_1_v5_gn_7_80981 Lactuca sativa HOM05D005427 ORTHO05D006461 1.0e-08 64.7 61 50.8
AagrBONN_evm.TU.Sc2ySwM_344.3300 Anthoceros agrestis HOM05D005427 ORTHO05D006461 1.8e-08 63.9 126 33.3


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