Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.017G079100 Populus trichocarpa HOM05D007272 ORTHO05D009305 1.9e-289 998.4 495 100.0
Sabra17G0070200 Salix brachista HOM05D007272 ORTHO05D009305 2.5e-265 918.3 492 92.7
Manes.17G022200 Manihot esculenta HOM05D007272 ORTHO05D009305 6.5e-213 744.2 492 75.4
Haze_14576 Corylus avellana HOM05D007272 ORTHO05D009305 2.2e-205 719.2 494 73.7
GSVIVG01011351001 Vitis vinifera HOM05D007272 ORTHO05D009305 5.2e-202 708.0 486 74.3
Cfa007518 Carpinus fangiana HOM05D007272 ORTHO05D009305 2.6e-201 705.7 495 72.5
Actinidia23567 Actinidia chinensis HOM05D007272 ORTHO05D009305 3.7e-200 701.8 493 73.6
CiPaw.04G019400 Carya illinoinensis HOM05D007272 ORTHO05D009305 3.8e-197 691.8 492 70.1
TWI34G0655 Tripterygium wilfordii HOM05D007272 ORTHO05D009305 1.1e-196 690.3 491 71.1
Duzib187G0958 Durio zibethinus HOM05D007272 ORTHO05D009305 5.2e-194 681.4 490 71.0
QL02p080768 Quercus lobata HOM05D007272 ORTHO05D009305 1.5e-193 679.9 484 71.7
Thecc.04G075900 Theobroma cacao HOM05D007272 ORTHO05D009305 3.7e-192 675.2 495 71.1
Ciclev10011541m.g Citrus clementina HOM05D007272 ORTHO05D009305 1.2e-190 670.2 492 70.7
TAR629G0691 Trochodendron aralioides HOM05D007272 ORTHO05D009305 1.2e-190 670.2 493 69.0
Gorai.006G025400 Gossypium raimondii HOM05D007272 ORTHO05D009305 2.7e-190 669.1 493 69.6
vmacro05725 Vaccinium macrocarpon HOM05D007272 ORTHO05D009305 7.2e-188 661.0 484 69.4
Prupe.3G271100 Prunus persica HOM05D007272 ORTHO05D009305 9.4e-188 660.6 495 68.3
Nn3g17142 Nelumbo nucifera HOM05D007272 ORTHO05D009305 3.0e-186 655.6 494 65.6
Gohir.A09G022200 Gossypium hirsutum HOM05D007272 ORTHO05D009305 2.6e-185 652.5 500 68.2
Cpa.g.sc14.36 Carica papaya HOM05D007272 ORTHO05D009305 4.4e-185 651.7 448 72.8
Hma1.2p1_0449F.1_g155160 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 8.3e-184 647.5 496 67.9
PGR142G3376 Punica granatum HOM05D007272 ORTHO05D009305 2.7e-182 642.5 490 67.3
Phvul.004G026700 Phaseolus vulgaris HOM05D007272 ORTHO05D009305 2.6e-177 625.9 494 64.8
Glyma.13G064500 Glycine max HOM05D007272 ORTHO05D009305 2.8e-176 622.5 499 65.3
Lj7C400T1 Lonicera japonica HOM05D007272 ORTHO05D009305 5.4e-175 618.2 488 64.8
Sc10g0003770 Simmondsia chinensis HOM05D007272 ORTHO05D009305 2.0e-174 616.3 490 63.7
Gohir.D09G021400 Gossypium hirsutum HOM05D007272 ORTHO05D009305 4.5e-174 615.1 459 68.4
RhsimUnG0199700 Rhododendron simsii HOM05D007272 ORTHO05D009305 4.5e-174 615.1 561 59.7
AUR62031636 Chenopodium quinoa HOM05D007272 ORTHO05D009305 2.9e-173 612.5 490 61.6
Ah.10g031300 Amaranthus hybridus HOM05D007272 ORTHO05D009305 5.0e-173 611.7 490 62.7
Ca_04270_v3 Cicer arietinum L. HOM05D007272 ORTHO05D009305 3.3e-172 609.0 484 63.6
MD17G1048000 Malus domestica HOM05D007272 ORTHO05D009305 9.5e-172 607.4 498 63.7
DCAR_021668 Daucus carota HOM05D007272 ORTHO05D009305 5.2e-170 601.7 485 61.9
QL02p080779 Quercus lobata HOM05D007272 ORTHO05D009305 1.5e-169 600.1 532 61.1
Hund13235 Selenicereus undatus HOM05D007272 ORTHO05D009305 4.9e-168 595.1 469 62.7
RhsimUnG0056400 Rhododendron simsii HOM05D007272 ORTHO05D009305 6.4e-168 594.7 610 56.2
Lalb_Chr21g0318941 Lupinus albus HOM05D007272 ORTHO05D009305 5.4e-167 591.7 481 63.6
TPR.G4317 Trifolium pratense HOM05D007272 ORTHO05D009305 6.6e-165 584.7 485 61.2
HanXRQChr14g0449311 Helianthus annuus HOM05D007272 ORTHO05D009305 1.1e-164 583.9 488 60.5
Lsat_1_v5_gn_2_88701 Lactuca sativa HOM05D007272 ORTHO05D009305 4.7e-163 578.6 498 60.0
RcHm_v2.0_Chr2g0169041 Rosa chinensis HOM05D007272 ORTHO05D009305 6.8e-162 574.7 499 60.7
FvH4_6g49170 Fragaria vesca HOM05D007272 ORTHO05D009305 4.4e-161 572.0 498 60.8
FAN05G2713 Fragaria x ananassa HOM05D007272 ORTHO05D009305 1.3e-160 570.5 496 60.7
FAN14G5197 Fragaria x ananassa HOM05D007272 ORTHO05D009305 3.7e-160 568.9 498 60.4
Psat1g075440 Pisum sativum HOM05D007272 ORTHO05D009305 1.2e-158 563.9 484 60.3
FAN02G2692 Fragaria x ananassa HOM05D001960 ORTHO05D004348 2.7e-158 562.8 498 59.6
arahy.Tifrunner.gnm1.ann1.UFNR33 Arachis hypogaea HOM05D007272 ORTHO05D009305 3.5e-158 562.4 488 60.2
Nitab4.5_0009739g0030 Nicotiana tabacum HOM05D007272 ORTHO05D009305 8.6e-157 557.8 501 58.7
Lj2g0023599 Lotus japonicus HOM05D007272 ORTHO05D009305 1.5e-156 557.0 496 59.5
EL10Ac2g02942 Beta vulgaris HOM05D007272 ORTHO05D009305 2.5e-156 556.2 489 58.9
MSTRG.3220 Avicennia marina HOM05D007272 ORTHO05D009305 1.2e-155 553.9 491 59.7
ClCG10G014870 Citrullus lanatus HOM05D007272 ORTHO05D009305 8.1e-155 551.2 486 59.1
THA.LOC104822369 Tarenaya hassleriana HOM05D007272 ORTHO05D009305 1.4e-154 550.4 489 58.7
Dinv33728 Davidia involucrata HOM05D007272 ORTHO05D009305 3.1e-154 549.3 362 76.2
Cc07_g03090 Coffea canephora HOM05D007272 ORTHO05D009305 8.9e-154 547.7 491 58.0
ECA238G2465 Erigeron canadensis HOM05D007272 ORTHO05D009305 3.5e-150 535.8 481 58.0
Migut.H00895 Erythranthe guttata HOM05D007272 ORTHO05D009305 7.8e-150 534.6 503 56.3
Lj2g0009951 Lotus japonicus HOM05D007272 ORTHO05D009305 2.3e-149 533.1 483 58.2
Atru.chr8.1898 Acer truncatum HOM05D007272 ORTHO05D009305 4.7e-147 525.4 371 73.0
SalBow1G7111 Salvia bowleyana HOM05D007272 ORTHO05D009305 1.2e-145 520.8 509 56.6
arahy.Tifrunner.gnm1.ann1.091QIK Arachis hypogaea HOM05D007272 ORTHO05D009305 4.4e-145 518.8 575 51.1
CANSAT64G0717 Cannabis sativa HOM05D007272 ORTHO05D009305 1.3e-144 517.3 465 55.9
Solyc02g087730.3 Solanum lycopersicum HOM05D007272 ORTHO05D009305 1.6e-142 510.4 490 54.9
Sopen02g032460 Solanum pennellii HOM05D007272 ORTHO05D009305 2.1e-142 510.0 490 54.7
PSO591G0492 Papaver somniferum HOM05D007272 ORTHO05D009305 1.0e-141 507.7 481 56.1
FAN09G2990 Fragaria x ananassa HOM05D007272 ORTHO05D009305 2.3e-141 506.5 403 64.8
COL.COLO4_25162 Corchorus olitorius HOM05D007118 ORTHO05D008957 6.6e-141 505.0 481 57.4
Gorai.012G056400 Gossypium raimondii HOM05D007272 ORTHO05D009305 8.6e-141 504.6 457 59.1
Gohir.D04G050866 Gossypium hirsutum HOM05D007272 ORTHO05D009305 2.5e-140 503.1 457 58.9
SGA_v2.0_scaffold135G34775 Striga asiatica HOM05D007118 ORTHO05D008957 6.9e-138 495.0 499 54.9
Peaxi162Scf00129g00431 Petunia axillaris HOM05D007272 ORTHO05D009305 2.0e-137 493.4 515 53.0
VMungo0464G0783 Vigna mungo HOM05D007272 ORTHO05D009305 1.7e-136 490.3 409 65.0
Glyma.19G020400 Glycine max HOM05D007272 ORTHO05D009305 1.9e-135 486.9 346 70.8
Gohir.A05G363800 Gossypium hirsutum HOM05D007272 ORTHO05D009305 4.2e-135 485.7 462 57.6
Oeu037173.1 Olea europaea HOM05D007272 ORTHO05D009305 4.2e-135 485.7 495 53.7
HPP92_000629 Vanilla planifolia HOM05D007272 ORTHO05D009305 4.9e-128 462.2 478 50.2
ATR0706G038 Amborella trichopoda HOM05D007272 ORTHO05D009305 3.9e-125 452.6 501 49.9
PSO832G2300 Papaver somniferum HOM05D007272 ORTHO05D009305 5.6e-124 448.7 432 55.6
Aqoxy3G03290 Aquilegia oxysepala HOM05D007272 ORTHO05D009305 4.0e-122 442.6 401 56.6
Nitab4.5_0000564g0300 Nicotiana tabacum HOM05D007272 ORTHO05D009305 9.0e-114 414.8 563 45.3
Os01g0185400 Oryza sativa ssp. japonica HOM05D007272 ORTHO05D009305 3.4e-113 412.9 486 48.4
MD09G1047900 Malus domestica HOM05D007272 ORTHO05D009305 1.6e-110 404.1 518 47.5
Zm00001eb121640 Zea mays HOM05D007272 ORTHO05D009305 2.3e-109 400.2 500 46.4
Medtr6g011500 Medicago truncatula HOM05D007272 ORTHO05D009305 3.1e-106 389.8 357 58.8
MD17G1048100 Malus domestica HOM05D007272 ORTHO05D009305 2.7e-102 376.7 317 60.6
Pp3c15_23310 Physcomitrium patens HOM05D007272 ORTHO05D009305 7.4e-100 368.6 521 43.6
PGSC0003DMG400001312 Solanum tuberosum HOM05D007272 ORTHO05D009305 1.4e-87 327.8 287 59.2
Mapoly0135s0023 Marchantia polymorpha HOM05D007272 ORTHO05D009305 1.4e-85 321.2 486 41.6
CSS0013465 Camellia sinensis var. sinensis HOM05D007272 ORTHO05D009305 1.4e-77 294.7 217 71.4
SMO356G0594 Selaginella moellendorffii HOM05D007272 ORTHO05D009305 1.3e-75 288.1 418 40.2
CSS0034889 Camellia sinensis var. sinensis HOM05D007272 ORTHO05D009305 1.9e-63 247.7 242 57.4
CDE04G0606 Ceratophyllum demersum HOM05D007272 ORTHO05D009305 5.2e-45 186.4 200 51.5
Duzib147G0842 Durio zibethinus HOM05D007272 ORTHO05D009305 8.9e-45 185.7 178 58.4
AagrBONN_evm.TU.Sc2ySwM_344.2727 Anthoceros agrestis HOM05D007272 ORTHO05D009305 2.3e-32 144.4 178 39.9
Zm00001eb204740 Zea mays HOM05D007272 ORTHO05D009305 4.6e-25 120.2 214 39.7
Hma1.2p1_0449F.1_g155150 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 3.9e-24 117.1 172 41.9
Hma1.2p1_2982F.1_g331245 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 3.9e-24 117.1 172 41.9
Hma1.2p1_2982F.1_g331250 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 5.1e-24 116.7 73 79.5
ATR0693G009 Amborella trichopoda HOM05D007272 ORTHO05D009305 1.1e-21 109.0 139 47.5
VMungo0464G0246 Vigna mungo HOM05D007272 ORTHO05D009305 3.1e-21 107.5 122 49.2
Medtr6g011510 Medicago truncatula HOM05D007272 ORTHO05D009305 9.9e-20 102.4 111 45.0
HanXRQChr07g0191831 Helianthus annuus HOM05D007272 ORTHO05D009305 2.4e-18 97.8 72 65.3
SGA_v2.0_scaffold52G19148 Striga asiatica HOM05D007272 ORTHO05D009305 9.3e-18 95.9 127 48.0
SGA_v2.0_scaffold52G19082 Striga asiatica HOM05D007272 ORTHO05D009305 2.1e-17 94.7 157 41.4
MELO3C030970.2 Cucumis melo HOM05D007272 ORTHO05D009305 7.8e-17 92.8 76 63.2
CDE04G1434 Ceratophyllum demersum HOM05D007272 ORTHO05D009305 5.1e-16 90.1 122 41.8
Medtr8g044020 Medicago truncatula HOM05D007272 ORTHO05D009305 3.3e-15 87.4 65 64.6
Dinv33460 Davidia involucrata HOM05D007272 ORTHO05D010159 2.6e-12 77.8 50 66.0
SGA_v2.0_scaffold52G19157 Striga asiatica HOM05D016586 ORTHO05D009305 1.7e-11 75.1 64 57.8
FAN19G2836 Fragaria x ananassa HOM05D007272 ORTHO05D045475 7.1e-10 69.7 39 82.1


User provided reference genes

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