Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.017G073000 Populus trichocarpa HOM05D006484 ORTHO05D008002 1.4e-159 566.2 292 100.0
Sabra16G0230700 Salix brachista HOM05D006484 ORTHO05D008002 4.1e-122 441.8 292 80.1
Manes.17G122200 Manihot esculenta HOM05D006484 ORTHO05D008002 2.6e-113 412.5 275 75.3
Cfa007430 Carpinus fangiana HOM05D006484 ORTHO05D008002 1.7e-112 409.8 266 75.2
Haze_14667 Corylus avellana HOM05D006484 ORTHO05D008002 2.2e-112 409.5 293 70.6
QL02p076682 Quercus lobata HOM05D006484 ORTHO05D008002 1.4e-109 400.2 292 71.6
Prupe.3G283800 Prunus persica HOM05D006484 ORTHO05D008002 1.3e-107 393.7 266 73.3
CiPaw.03G037700 Carya illinoinensis HOM05D006484 ORTHO05D008002 1.7e-107 393.3 295 69.2
CSS0043741 Camellia sinensis var. sinensis HOM05D006484 ORTHO05D008002 1.6e-105 386.7 294 70.4
Dinv33496 Davidia involucrata HOM05D006484 ORTHO05D008002 2.6e-105 386.0 289 72.0
TWI56G0797 Tripterygium wilfordii HOM05D006484 ORTHO05D008002 7.7e-105 384.4 288 68.8
RcHm_v2.0_Chr2g0171411 Rosa chinensis HOM05D006484 ORTHO05D008002 1.0e-104 384.0 267 71.9
TAR629G1796 Trochodendron aralioides HOM05D006484 ORTHO05D008002 1.9e-103 379.8 301 66.8
Duzib147G0204 Durio zibethinus HOM05D006484 ORTHO05D008002 3.2e-103 379.0 275 68.7
COL.COLO4_28946 Corchorus olitorius HOM05D006484 ORTHO05D008002 9.4e-103 377.5 261 71.6
MD17G1035000 Malus domestica HOM05D006484 ORTHO05D008002 4.7e-102 375.2 298 64.4
FAN02G1518 Fragaria x ananassa HOM05D006484 ORTHO05D008002 4.0e-101 372.1 267 69.7
Thecc.04G008700 Theobroma cacao HOM05D006484 ORTHO05D008002 4.0e-101 372.1 293 66.6
FAN14G3872 Fragaria x ananassa HOM05D006484 ORTHO05D008002 8.8e-101 370.9 267 69.3
FvH4_6g50620 Fragaria vesca HOM05D006484 ORTHO05D008002 2.6e-100 369.4 267 69.3
Ciclev10016148m.g Citrus clementina HOM05D006484 ORTHO05D008002 9.7e-100 367.5 283 68.6
Hma1.2p1_0802F.1_g220370 Hydrangea macrophylla HOM05D006484 ORTHO05D008002 1.3e-99 367.1 268 70.9
Gohir.A11G067300 Gossypium hirsutum HOM05D006484 ORTHO05D008002 4.8e-99 365.2 285 67.0
ClCG10G014230 Citrullus lanatus HOM05D006484 ORTHO05D008002 5.3e-98 361.7 287 65.9
CANSAT64G2071 Cannabis sativa HOM05D006484 ORTHO05D008002 7.0e-98 361.3 295 67.5
Gohir.D11G071200 Gossypium hirsutum HOM05D006484 ORTHO05D008002 2.0e-97 359.8 285 66.3
Gorai.007G076500 Gossypium raimondii HOM05D006484 ORTHO05D008002 2.0e-97 359.8 285 66.3
PGR142G1659 Punica granatum HOM05D006484 ORTHO05D008002 3.5e-97 359.0 266 68.0
FAN09G0334 Fragaria x ananassa HOM05D006484 ORTHO05D008002 4.5e-97 358.6 275 66.5
arahy.Tifrunner.gnm1.ann1.J6NIZK Arachis hypogaea HOM05D006484 ORTHO05D008002 1.3e-96 357.1 299 65.2
FAN05G1767 Fragaria x ananassa HOM05D006484 ORTHO05D008002 8.5e-96 354.4 301 61.8
Rhsim08G0055200 Rhododendron simsii HOM05D006484 ORTHO05D008002 8.5e-96 354.4 290 64.8
arahy.Tifrunner.gnm1.ann1.ND36BV Arachis hypogaea HOM05D006484 ORTHO05D008002 1.1e-95 354.0 299 64.2
Migut.K01368 Erythranthe guttata HOM05D006484 ORTHO05D008002 3.2e-95 352.4 266 65.8
MSTRG.15510 Avicennia marina HOM05D006484 ORTHO05D008002 5.5e-95 351.7 267 65.9
Nitab4.5_0005176g0030 Nicotiana tabacum HOM05D006484 ORTHO05D008002 5.5e-95 351.7 296 63.9
Aqoxy3G01007 Aquilegia oxysepala HOM05D006484 ORTHO05D008002 9.4e-95 350.9 296 61.5
Nitab4.5_0003337g0080 Nicotiana tabacum HOM05D006484 ORTHO05D008002 9.4e-95 350.9 298 63.4
CsaV3_3G042410 Cucumis sativus L. HOM05D006484 ORTHO05D008002 1.6e-94 350.1 291 62.5
MELO3C009955.2 Cucumis melo HOM05D006484 ORTHO05D008002 3.6e-94 349.0 287 62.7
SalBow7G4444 Salvia bowleyana HOM05D006484 ORTHO05D008002 1.8e-93 346.7 290 62.8
Lsat_1_v5_gn_0_26201 Lactuca sativa HOM05D006484 ORTHO05D008002 4.0e-93 345.5 290 60.0
PSO063G6163 Papaver somniferum HOM05D006484 ORTHO05D008002 4.0e-93 345.5 308 62.7
Glyma.13G169000 Glycine max HOM05D006484 ORTHO05D008002 5.2e-93 345.1 284 63.0
Eucgr.I01814 Eucalyptus grandis HOM05D006484 ORTHO05D008002 6.8e-93 344.7 266 66.5
Peaxi162Scf00129g00106 Petunia axillaris HOM05D006484 ORTHO05D008002 6.8e-93 344.7 290 61.4
Sed0007993 Sechium edule HOM05D006484 ORTHO05D008002 1.2e-92 344.0 290 61.4
Cc07_g02300 Coffea canephora HOM05D006484 ORTHO05D008002 1.5e-92 343.6 229 73.4
Glyma.19G009200 Glycine max HOM05D006484 ORTHO05D008002 1.5e-92 343.6 260 65.0
SGA_v2.0_scaffold30G12470 Striga asiatica HOM05D006484 ORTHO05D008002 1.5e-92 343.6 266 65.0
PSO832G1464 Papaver somniferum HOM05D006484 ORTHO05D008002 2.0e-92 343.2 264 68.2
THA.LOC104805398 Tarenaya hassleriana HOM05D006484 ORTHO05D008002 2.0e-92 343.2 293 63.5
GSVIVG01032484001 Vitis vinifera HOM05D006484 ORTHO05D008002 2.0e-92 343.2 229 72.9
MBI16_g26453_MAGBIO Magnolia biondii HOM05D006484 ORTHO05D008002 3.4e-92 342.4 241 71.8
HanXRQChr15g0474541 Helianthus annuus HOM05D006484 ORTHO05D008002 1.7e-91 340.1 257 66.1
Lalb_Chr21g0319431 Lupinus albus HOM05D006484 ORTHO05D008002 1.7e-91 340.1 235 71.9
Solyc02g086890.3 Solanum lycopersicum HOM05D006484 ORTHO05D008002 2.8e-91 339.3 292 62.0
Sopen02g031660 Solanum pennellii HOM05D006484 ORTHO05D008002 6.3e-91 338.2 292 62.0
unitig_88.g27777 Utricularia gibba HOM05D000190 ORTHO05D000113 5.4e-90 335.1 241 66.0
Hund05806 Selenicereus undatus HOM05D006484 ORTHO05D008002 1.2e-89 334.0 262 66.0
Ca_04198_v3 Cicer arietinum L. HOM05D006484 ORTHO05D008002 1.0e-88 330.9 247 66.4
Lj7A591T78 Lonicera japonica HOM05D006484 ORTHO05D008002 2.2e-88 329.7 240 68.8
BcaB02g08436 Brassica carinata HOM05D006484 ORTHO05D008002 2.9e-88 329.3 234 67.5
BcaC02g09737 Brassica carinata HOM05D006484 ORTHO05D008002 6.5e-88 328.2 234 67.5
A04p04700 Brassica napus HOM05D006484 ORTHO05D008002 6.5e-88 328.2 234 67.5
C04p37040 Brassica napus HOM05D006484 ORTHO05D008002 6.5e-88 328.2 234 67.5
BolC4t25282H Brassica oleracea HOM05D006484 ORTHO05D008002 6.5e-88 328.2 234 67.5
BraA04t16182Z Brassica rapa HOM05D006484 ORTHO05D008002 6.5e-88 328.2 234 67.5
VMungo0464G2075 Vigna mungo HOM05D006484 ORTHO05D008002 1.5e-87 327.0 278 60.4
ECA246G1918 Erigeron canadensis HOM05D006484 ORTHO05D008002 1.9e-87 326.6 233 69.1
Phvul.004G016700 Phaseolus vulgaris HOM05D006484 ORTHO05D008002 3.2e-87 325.9 234 68.4
TPR.G2295 Trifolium pratense HOM05D006484 ORTHO05D008002 3.2e-87 325.9 234 68.4
PGSC0003DMG401000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 7.2e-87 324.7 227 69.2
PGSC0003DMG402000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 7.2e-87 324.7 227 69.2
Sp5g07210 Schrenkiella parvula HOM05D006484 ORTHO05D008002 1.6e-86 323.6 253 64.0
BcaC07g39842 Brassica carinata HOM05D006484 ORTHO05D008002 2.1e-86 323.2 267 61.4
C08p30440 Brassica napus HOM05D006484 ORTHO05D008002 2.1e-86 323.2 294 58.2
A09p48180 Brassica napus HOM05D006484 ORTHO05D008002 3.6e-86 322.4 295 58.0
BraA09t40274Z Brassica rapa HOM05D006484 ORTHO05D008002 3.6e-86 322.4 295 58.3
Lj2g0018435 Lotus japonicus HOM05D006484 ORTHO05D008002 6.1e-86 321.6 234 67.1
EL10Ac6g14629 Beta vulgaris HOM05D006484 ORTHO05D008002 8.0e-86 321.2 241 67.6
BolC8t50667H Brassica oleracea HOM05D006484 ORTHO05D008002 1.4e-85 320.5 294 57.5
Medtr6g007180 Medicago truncatula HOM05D006484 ORTHO05D008002 1.4e-85 320.5 237 67.5
Thhalv10010599m.g Eutrema salsugineum HOM05D006484 ORTHO05D008002 6.8e-85 318.2 234 65.4
AL5G36370 Arabidopsis lyrata HOM05D006484 ORTHO05D008002 1.2e-84 317.4 265 60.8
AT3G55250 Arabidopsis thaliana HOM05D006484 ORTHO05D008002 2.0e-84 316.6 262 61.1
Sc10g0003790 Simmondsia chinensis HOM05D006484 ORTHO05D008002 2.0e-84 316.6 262 63.4
Carub.0005s2191 Capsella rubella HOM05D006484 ORTHO05D008002 5.7e-84 315.1 234 66.2
CARHR165250 Cardamine hirsuta HOM05D006484 ORTHO05D008002 5.7e-84 315.1 265 61.1
Psat1g058640 Pisum sativum HOM05D006484 ORTHO05D008002 5.7e-84 315.1 229 68.1
Aa31LG10G9850 Aethionema arabicum HOM05D006484 ORTHO05D008002 2.2e-83 313.2 251 62.2
Ah.02g127510 Amaranthus hybridus HOM05D006484 ORTHO05D008002 2.8e-83 312.8 218 71.1
DCAR_021681 Daucus carota HOM05D006484 ORTHO05D008002 1.4e-82 310.5 301 55.5
CDE05G1394 Ceratophyllum demersum HOM05D001719 ORTHO05D008883 4.1e-82 308.9 221 68.8
ATR0730G086 Amborella trichopoda HOM05D006484 ORTHO05D008002 3.5e-81 305.8 229 65.1
Nn4g22800 Nelumbo nucifera HOM05D006484 ORTHO05D008002 1.3e-80 303.9 259 63.3
Os05g0526200 Oryza sativa ssp. japonica HOM05D006484 ORTHO05D008002 3.3e-79 299.3 251 62.9
HPP92_024318 Vanilla planifolia HOM05D006484 ORTHO05D008002 1.8e-69 266.9 242 58.3
BcaB01g00117 Brassica carinata HOM05D006484 ORTHO05D008002 3.4e-68 262.7 223 60.1
Actinidia35740 Actinidia chinensis HOM05D006484 ORTHO05D008002 1.7e-67 260.4 182 71.4
vmacro18241 Vaccinium macrocarpon HOM05D006484 ORTHO05D008002 2.6e-60 236.5 293 48.5
AUR62007841 Chenopodium quinoa HOM05D006484 ORTHO05D008002 7.5e-60 235.0 261 51.7
Cpa.g.sc39.92 Carica papaya HOM05D006484 ORTHO05D008002 2.9e-59 233.0 171 69.0
Zm00001eb215070 Zea mays HOM05D006484 ORTHO05D008002 1.4e-50 204.1 155 64.5
AagrBONN_evm.TU.Sc2ySwM_344.2636 Anthoceros agrestis HOM05D006484 ORTHO05D008002 4.3e-47 192.6 208 47.6
BolC3t16636H Brassica oleracea HOM05D006484 ORTHO05D008002 2.1e-46 190.3 190 54.2
Pp3c21_1380 Physcomitrium patens HOM05D006484 ORTHO05D008002 2.1e-46 190.3 216 47.2
AUR62003035 Chenopodium quinoa HOM05D006484 ORTHO05D008002 2.0e-44 183.7 203 51.2
BolC7t43763H Brassica oleracea HOM05D006484 ORTHO05D008002 1.7e-43 180.6 210 49.0
Mapoly0095s0016 Marchantia polymorpha HOM05D006484 ORTHO05D008002 2.7e-41 173.3 192 46.4
SMO165G0092 Selaginella moellendorffii HOM05D006484 ORTHO05D008002 5.1e-40 169.1 217 44.2
HPP92_024280 Vanilla planifolia HOM05D006484 ORTHO05D008002 1.5e-39 167.5 135 63.0
CBR_g163 Chara braunii HOM05D006484 ORTHO05D008002 4.9e-35 152.5 195 41.5
Atru.chr6.2293 Acer truncatum HOM05D006484 ORTHO05D008002 6.0e-33 145.6 87 74.7
CAN.G473.120 Capsicum annuum HOM05D006484 ORTHO05D008002 4.8e-30 136.0 140 50.7
CAN.G685.18 Capsicum annuum HOM05D006484 ORTHO05D008002 3.0e-24 116.7 91 62.6
Atru.chr6.2294 Acer truncatum HOM05D006484 ORTHO05D008002 6.7e-24 115.5 87 66.7
MD09G1034600 Malus domestica HOM05D006484 ORTHO05D000001 2.1e-22 110.5 106 58.5
BcaC06g34142 Brassica carinata HOM05D006484 ORTHO05D008002 6.2e-22 109.0 152 45.4
arahy.Tifrunner.gnm1.ann1.QWBN9A Arachis hypogaea HOM05D006484 ORTHO05D008002 2.3e-16 90.5 60 68.3
MD09G1034700 Malus domestica HOM05D006484 ORTHO05D008002 3.7e-14 83.2 75 57.3
TPR.G33278 Trifolium pratense HOM05D006484 ORTHO05D008002 4.8e-14 82.8 51 74.5
Cre03.g183400 Chlamydomonas reinhardtii HOM05D006484 ORTHO05D008002 3.1e-13 80.1 223 27.4
PRCOL_00006041 Prasinoderma coloniale HOM05D006484 ORTHO05D008002 8.7e-08 62.0 129 34.1
arahy.Tifrunner.gnm1.ann1.5V94PQ Arachis hypogaea HOM05D005791 ORTHO05D008002 1.1e-07 61.6 34 82.4


User provided reference genes

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