Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.017G066388 Populus trichocarpa HOM05D005517 ORTHO05D006760 9.4e-31 136.3 75 100.0
Sabra17G0058600 Salix brachista HOM05D005517 ORTHO05D006760 2.0e-28 128.6 75 92.0
Potri.001G328100 Populus trichocarpa HOM05D005517 ORTHO05D006760 8.2e-27 123.2 74 89.2
Manes.15G162502 Manihot esculenta HOM05D005517 ORTHO05D006760 2.0e-25 118.6 74 87.8
Glyma.19G093900 Glycine max HOM05D005517 ORTHO05D006760 3.8e-24 114.4 74 79.7
CiPaw.03G057500 Carya illinoinensis HOM05D005517 ORTHO05D006760 6.5e-24 113.6 74 79.7
GSVIVG01028670001 Vitis vinifera HOM05D005517 ORTHO05D006760 6.5e-24 113.6 74 81.1
BcaB01g06344 Brassica carinata HOM05D005517 ORTHO05D006760 8.5e-24 113.2 73 76.7
A02p02340 Brassica napus HOM05D005517 ORTHO05D006760 8.5e-24 113.2 73 78.1
BraA02t05205Z Brassica rapa HOM05D005517 ORTHO05D006760 8.5e-24 113.2 73 78.1
Glyma.16G054600 Glycine max HOM05D005517 ORTHO05D006760 1.4e-23 112.5 74 77.0
BcaB08g36959 Brassica carinata HOM05D005517 ORTHO05D006760 5.5e-23 110.5 73 75.3
BcaC03g13514 Brassica carinata HOM05D005517 ORTHO05D006760 7.2e-23 110.2 73 76.7
BcaC03g13515 Brassica carinata HOM05D005517 ORTHO05D006760 7.2e-23 110.2 73 76.7
BcaC04g19059 Brassica carinata HOM05D005517 ORTHO05D006760 7.2e-23 110.2 73 74.0
C09p63000 Brassica napus HOM05D005517 ORTHO05D006760 7.2e-23 110.2 73 74.0
BolC9t59138H Brassica oleracea HOM05D005517 ORTHO05D006760 7.2e-23 110.2 73 74.0
Carub.0006s1230 Capsella rubella HOM05D005517 ORTHO05D006760 9.4e-23 109.8 74 75.7
Atru.chr6.2589 Acer truncatum HOM05D005517 ORTHO05D006760 1.6e-22 109.0 73 79.5
A10p24320 Brassica napus HOM05D005517 ORTHO05D006760 1.6e-22 109.0 73 72.6
BraA10t44498Z Brassica rapa HOM05D005517 ORTHO05D006760 1.6e-22 109.0 73 72.6
TAR371G1004 Trochodendron aralioides HOM05D005517 ORTHO05D006760 1.6e-22 109.0 74 77.0
AT5G14105 Arabidopsis thaliana HOM05D005517 ORTHO05D006760 2.1e-22 108.6 74 77.0
Phvul.001G091300 Phaseolus vulgaris HOM05D005517 ORTHO05D006760 2.1e-22 108.6 74 74.3
BcaNung06018 Brassica carinata HOM05D005517 ORTHO05D006760 2.7e-22 108.2 73 75.3
C02p06560 Brassica napus HOM05D005517 ORTHO05D006760 3.6e-22 107.8 73 76.7
Ciclev10017370m.g Citrus clementina HOM05D005517 ORTHO05D006760 3.6e-22 107.8 73 76.7
THA.LOC104803813 Tarenaya hassleriana HOM05D005517 ORTHO05D006760 6.1e-22 107.1 73 72.6
CARHR199240 Cardamine hirsuta HOM05D005517 ORTHO05D006760 1.0e-21 106.3 73 75.3
Nn3g16415 Nelumbo nucifera HOM05D005517 ORTHO05D006760 1.0e-21 106.3 74 75.7
TAR629G2363 Trochodendron aralioides HOM05D005517 ORTHO05D006760 1.0e-21 106.3 74 73.0
TWI74G0054 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 1.4e-21 105.9 74 75.7
TWI74G0227 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 1.4e-21 105.9 74 75.7
arahy.Tifrunner.gnm1.ann1.3828X0 Arachis hypogaea HOM05D005517 ORTHO05D006760 3.0e-21 104.8 74 78.4
Cpa.g.sc70.124 Carica papaya HOM05D005517 ORTHO05D006760 3.0e-21 104.8 73 75.3
BcaC03g13513 Brassica carinata HOM05D005517 ORTHO05D006760 5.2e-21 104.0 72 72.2
Ca_26962_v3 Cicer arietinum L. HOM05D005517 ORTHO05D006760 5.2e-21 104.0 74 78.4
Gohir.A07G229900 Gossypium hirsutum HOM05D005517 ORTHO05D006760 8.8e-21 103.2 75 77.3
Gohir.D07G237100 Gossypium hirsutum HOM05D005517 ORTHO05D006760 8.8e-21 103.2 75 77.3
Gorai.001G273000 Gossypium raimondii HOM05D005517 ORTHO05D006760 8.8e-21 103.2 75 77.3
Duzib187G1036 Durio zibethinus HOM05D005517 ORTHO05D006760 1.1e-20 102.8 69 78.3
Duzib264G0094 Durio zibethinus HOM05D005517 ORTHO05D006760 1.5e-20 102.4 69 78.3
Lalb_Chr16g0380111 Lupinus albus HOM05D005517 ORTHO05D006760 1.5e-20 102.4 74 77.0
Thecc.04G039500 Theobroma cacao HOM05D005517 ORTHO05D006760 1.5e-20 102.4 69 78.3
CANSAT64G1159 Cannabis sativa HOM05D005517 ORTHO05D006760 2.0e-20 102.1 74 73.0
CiPaw.04G038900 Carya illinoinensis HOM05D005517 ORTHO05D006760 2.6e-20 101.7 69 78.3
Lj1g0000511 Lotus japonicus HOM05D005517 ORTHO05D006760 2.6e-20 101.7 74 75.7
Medtr7g028755 Medicago truncatula HOM05D005517 ORTHO05D006760 3.3e-20 101.3 74 78.4
COL.COLO4_13282 Corchorus olitorius HOM05D005517 ORTHO05D006760 4.4e-20 100.9 68 79.4
Aa31LG11G14910 Aethionema arabicum HOM05D005517 ORTHO05D006760 7.4e-20 100.1 73 71.2
Eucgr.H04420 Eucalyptus grandis HOM05D005517 ORTHO05D006760 9.7e-20 99.8 74 75.7
Gohir.D04G075800 Gossypium hirsutum HOM05D005517 ORTHO05D006760 9.7e-20 99.8 69 73.9
Aqoxy1G01489 Aquilegia oxysepala HOM05D005517 ORTHO05D006760 1.3e-19 99.4 74 70.3
Duzib147G1371 Durio zibethinus HOM05D005517 ORTHO05D006760 1.3e-19 99.4 73 75.3
Lalb_Chr05g0214841 Lupinus albus HOM05D005517 ORTHO05D006760 1.3e-19 99.4 73 75.3
ClCG05G013610 Citrullus lanatus HOM05D005517 ORTHO05D006760 2.2e-19 98.6 74 74.3
QL10p050767 Quercus lobata HOM05D005517 ORTHO05D006760 2.2e-19 98.6 68 77.9
TWI60G0382 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 2.2e-19 98.6 74 78.4
Dinv25651 Davidia involucrata HOM05D005517 ORTHO05D006760 2.8e-19 98.2 74 73.0
QL02p071008 Quercus lobata HOM05D005517 ORTHO05D006760 2.8e-19 98.2 64 79.7
RcHm_v2.0_Chr1g0371371 Rosa chinensis HOM05D005517 ORTHO05D006760 2.8e-19 98.2 74 74.3
RcHm_v2.0_Chr7g0186891 Rosa chinensis HOM05D005517 ORTHO05D006760 2.8e-19 98.2 74 74.3
Aa31LG5G11080 Aethionema arabicum HOM05D005517 ORTHO05D006760 3.7e-19 97.8 70 71.4
TWI34G0084 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 3.7e-19 97.8 74 75.7
TWI34G1158 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 3.7e-19 97.8 74 75.7
CSS0012820 Camellia sinensis var. sinensis HOM05D005517 ORTHO05D006760 4.8e-19 97.4 74 71.6
CAN.G473.115 Capsicum annuum HOM05D005517 ORTHO05D006760 6.3e-19 97.1 74 70.3
HPP92_000894 Vanilla planifolia HOM05D005517 ORTHO05D006760 6.3e-19 97.1 74 66.2
Ca_14034_v3 Cicer arietinum L. HOM05D005517 ORTHO05D006760 8.2e-19 96.7 69 71.0
Migut.F00052 Erythranthe guttata HOM05D005517 ORTHO05D006760 8.2e-19 96.7 74 68.9
Dinv33325 Davidia involucrata HOM05D005517 ORTHO05D006760 1.1e-18 96.3 74 70.3
Cc10_g16370 Coffea canephora HOM05D005517 ORTHO05D006760 1.4e-18 95.9 74 71.6
Sopen04g004730 Solanum pennellii HOM05D005517 ORTHO05D006760 1.4e-18 95.9 74 67.6
PGSC0003DMG400032535 Solanum tuberosum HOM05D005517 ORTHO05D006760 1.4e-18 95.9 74 67.6
Psat5g229880 Pisum sativum HOM05D005517 ORTHO05D006760 1.8e-18 95.5 74 70.3
FvH4_5g10930 Fragaria vesca HOM05D005517 ORTHO05D006760 2.4e-18 95.1 73 74.0
FAN08G0577 Fragaria x ananassa HOM05D005517 ORTHO05D006760 2.4e-18 95.1 73 74.0
FAN13G3313 Fragaria x ananassa HOM05D005517 ORTHO05D006760 2.4e-18 95.1 73 74.0
FAN18G2496 Fragaria x ananassa HOM05D005517 ORTHO05D006760 2.4e-18 95.1 73 74.0
HanXRQChr02g0035131 Helianthus annuus HOM05D005517 ORTHO05D006760 2.4e-18 95.1 75 69.3
Lsat_1_v5_gn_1_29421 Lactuca sativa HOM05D005517 ORTHO05D006760 2.4e-18 95.1 75 68.0
Medtr3g007670 Medicago truncatula HOM05D005517 ORTHO05D006760 2.4e-18 95.1 75 72.0
Sabra16G0209900 Salix brachista HOM05D005517 ORTHO05D006760 2.4e-18 95.1 133 48.9
Os05g0517800 Oryza sativa ssp. japonica HOM05D005517 ORTHO05D006760 3.1e-18 94.7 75 66.7
Prupe.5G129500 Prunus persica HOM05D005517 ORTHO05D006760 3.1e-18 94.7 74 74.3
MELO3C014894.2 Cucumis melo HOM05D005517 ORTHO05D006760 4.1e-18 94.4 74 71.6
Sopen02g038880 Solanum pennellii HOM05D005517 ORTHO05D006760 4.1e-18 94.4 74 67.6
Cc03_g13370 Coffea canephora HOM05D005517 ORTHO05D006760 5.3e-18 94.0 74 67.6
PGSC0003DMG402020250 Solanum tuberosum HOM05D005517 ORTHO05D006760 5.3e-18 94.0 74 67.6
Zm00001eb293020 Zea mays HOM05D005517 ORTHO05D006760 5.3e-18 94.0 75 64.0
CDE08G1355 Ceratophyllum demersum HOM05D005517 ORTHO05D006760 9.1e-18 93.2 73 64.4
CsaV3_3G026940 Cucumis sativus L. HOM05D005517 ORTHO05D006760 9.1e-18 93.2 74 71.6
ECA232G0857 Erigeron canadensis HOM05D005517 ORTHO05D006760 1.2e-17 92.8 75 68.0
Rhsim08G0041900 Rhododendron simsii HOM05D005517 ORTHO05D006760 1.2e-17 92.8 74 67.6
MBI06_g06692_MAGBIO Magnolia biondii HOM05D005517 ORTHO05D006760 1.6e-17 92.4 73 68.5
Solyc04g009570.3 Solanum lycopersicum HOM05D005517 ORTHO05D006760 1.6e-17 92.4 74 66.2
Psat6g022360 Pisum sativum HOM05D005517 ORTHO05D006760 2.0e-17 92.0 74 70.3
AUR62006995 Chenopodium quinoa HOM05D005517 ORTHO05D006760 2.6e-17 91.7 74 62.2
Thhalv10021865m.g Eutrema salsugineum HOM05D005517 ORTHO05D006760 2.6e-17 91.7 75 65.3
Lsat_1_v5_gn_4_78980 Lactuca sativa HOM05D005517 ORTHO05D006760 2.6e-17 91.7 75 68.0
Peaxi162Scf00420g00633 Petunia axillaris HOM05D005517 ORTHO05D006760 2.6e-17 91.7 74 62.2
vmacro22457 Vaccinium macrocarpon HOM05D005517 ORTHO05D006760 4.5e-17 90.9 74 66.2
PSO210G3561 Papaver somniferum HOM05D005517 ORTHO05D006760 5.9e-17 90.5 73 67.1
AUR62000640 Chenopodium quinoa HOM05D005517 ORTHO05D006760 7.7e-17 90.1 69 63.8
Nitab4.5_0007375g0080 Nicotiana tabacum HOM05D005517 ORTHO05D006760 7.7e-17 90.1 74 63.5
TPR.G30072 Trifolium pratense HOM05D005517 ORTHO05D006760 7.7e-17 90.1 74 66.2
Hma1.2p1_1057F.1_g252720 Hydrangea macrophylla HOM05D005517 ORTHO05D006760 1.0e-16 89.7 73 65.8
Rhsim10G0005200 Rhododendron simsii HOM05D005517 ORTHO05D006760 1.7e-16 89.0 74 66.2
Hund05668 Selenicereus undatus HOM05D005517 ORTHO05D006760 1.7e-16 89.0 75 65.3
PSO302G0245 Papaver somniferum HOM05D005517 ORTHO05D006760 2.2e-16 88.6 73 65.8
HanXRQChr16g0497941 Helianthus annuus HOM05D005517 ORTHO05D006760 5.0e-16 87.4 75 65.3
Hund07167 Selenicereus undatus HOM05D005517 ORTHO05D006760 6.5e-16 87.0 74 58.1
SEGI_12962 Sequoiadendron giganteum HOM05D005517 ORTHO05D006760 8.5e-16 86.7 74 58.1
MD14G1126500 Malus domestica HOM05D005517 ORTHO05D006760 1.1e-15 86.3 73 67.1
Oeu063019.1 Olea europaea HOM05D005517 ORTHO05D006760 1.1e-15 86.3 74 64.9
MD06G1118400 Malus domestica HOM05D005517 ORTHO05D006760 1.5e-15 85.9 73 65.8
Phvul.009G125500 Phaseolus vulgaris HOM05D005517 ORTHO05D006760 1.5e-15 85.9 52 80.8
EL10Ac4g09777 Beta vulgaris HOM05D005517 ORTHO05D006760 2.5e-15 85.1 72 66.7
Haze_14891 Corylus avellana HOM05D005517 ORTHO05D006760 2.5e-15 85.1 138 44.2
CSS0038475 Camellia sinensis var. sinensis HOM05D005517 ORTHO05D006760 3.2e-15 84.7 74 63.5
EL10Ac7g18130 Beta vulgaris HOM05D005517 ORTHO05D006760 9.4e-15 83.2 76 59.2
PGR142G3118 Punica granatum HOM05D005517 ORTHO05D006760 9.4e-15 83.2 74 66.2
arahy.Tifrunner.gnm1.ann1.9JMW1H Arachis hypogaea HOM05D005517 ORTHO05D006760 2.1e-14 82.0 50 84.0
THA.LOC104814182 Tarenaya hassleriana HOM05D005517 ORTHO05D006760 3.6e-14 81.3 124 41.9
TPR.G36037 Trifolium pratense HOM05D005517 ORTHO05D006760 4.4e-12 74.3 50 72.0
AagrBONN_evm.TU.Sc2ySwM_228.2988 Anthoceros agrestis HOM05D005517 ORTHO05D006760 1.7e-11 72.4 74 56.8
Cc02_g28320 Coffea canephora HOM05D005517 ORTHO05D006760 8.3e-11 70.1 59 64.4
Os03g0733000 Oryza sativa ssp. japonica HOM05D005517 ORTHO05D006760 8.3e-11 70.1 75 52.0
Mapoly0055s0070 Marchantia polymorpha HOM05D005517 ORTHO05D006760 1.1e-10 69.7 75 49.3
Peaxi162Scf00064g01122 Petunia axillaris HOM05D005517 ORTHO05D006760 1.1e-10 69.7 65 53.8
Prupe.2G009500 Prunus persica HOM05D005517 ORTHO05D006760 2.4e-10 68.6 74 63.5
Pp3c14_7680 Physcomitrium patens HOM05D005517 ORTHO05D006760 7.7e-09 63.5 59 55.9
Pp3c1_33450 Physcomitrium patens HOM05D005517 ORTHO05D006760 1.3e-08 62.8 63 47.6
vmacro05969 Vaccinium macrocarpon HOM05D005517 ORTHO05D006760 5.0e-08 60.8 72 47.2
Sed0001513 Sechium edule HOM05D005517 ORTHO05D006760 2.7e-06 55.1 125 36.8


User provided reference genes

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