Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.017G065250 Populus trichocarpa HOM05D000003 ORTHO05D000006 1.3e-67 259.6 128 100.0
Potri.006G175050 Populus trichocarpa HOM05D000003 ORTHO05D000006 1.1e-26 123.6 103 66.0
Sabra15G0020900 Salix brachista HOM05D000003 ORTHO05D000006 1.8e-26 122.9 131 44.3
Sabra15G0018400 Salix brachista HOM05D000003 ORTHO05D000006 7.0e-26 120.9 131 42.7
Glyma.07G238625 Glycine max HOM05D000003 ORTHO05D000006 6.3e-19 97.8 131 34.4
Potri.018G064450 Populus trichocarpa HOM05D000003 ORTHO05D000006 1.8e-18 96.3 123 42.3
TPR.G20743 Trifolium pratense HOM05D000003 ORTHO05D000006 1.0e-16 90.5 133 35.3
arahy.Tifrunner.gnm1.ann1.7MJ6N9 Arachis hypogaea HOM05D000003 ORTHO05D000006 1.1e-15 87.0 129 36.4
Potri.010G031125 Populus trichocarpa HOM05D000003 ORTHO05D000006 1.2e-12 77.0 123 37.4
TPR.G21254 Trifolium pratense HOM05D000003 ORTHO05D000006 9.8e-12 73.9 118 34.7
AUR62029183 Chenopodium quinoa HOM05D012396 ORTHO05D000006 1.7e-11 73.2 133 36.8
RcHm_v2.0_Chr2g0146151 Rosa chinensis HOM05D000003 ORTHO05D000006 1.2e-09 67.0 124 29.8
Atru.chr1.956 Acer truncatum HOM05D000003 ORTHO05D000006 2.2e-08 62.8 128 28.9
Potri.010G013850 Populus trichocarpa HOM05D000003 ORTHO05D000006 6.5e-08 61.2 119 31.1
TPR.G34599 Trifolium pratense HOM05D000003 ORTHO05D000006 1.5e-07 60.1 111 28.8
Glyma.01G131950 Glycine max HOM05D000003 ORTHO05D000006 1.9e-07 59.7 114 25.4
Atru.chr2.1277 Acer truncatum HOM05D000003 ORTHO05D000006 3.2e-07 58.9 123 28.5
FvH4_1g29781 Fragaria vesca HOM05D010299 ORTHO05D019146 7.2e-07 57.8 78 34.6
FvH4_5g27994 Fragaria vesca HOM05D000003 ORTHO05D000004 1.6e-06 56.6 127 29.1
Atru.chr5.349 Acer truncatum HOM05D000003 ORTHO05D000006 2.7e-06 55.8 70 35.7
FvH4_5g34261 Fragaria vesca HOM05D000003 ORTHO05D000006 3.6e-06 55.5 82 30.5


User provided reference genes

Program Settings