Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.017G060400 Populus trichocarpa HOM05D010918 ORTHO05D010815 1.1e-53 213.0 109 100.0
Sabra17G0054200 Salix brachista HOM05D001116 ORTHO05D001028 6.5e-33 144.1 104 76.9
Manes.04G092250 Manihot esculenta HOM05D009379 ORTHO05D010815 5.5e-24 114.4 90 65.6
Manes.11G077600 Manihot esculenta HOM05D009379 ORTHO05D010815 3.0e-22 108.6 90 60.0
Cfa007173 Carpinus fangiana HOM05D010918 ORTHO05D010815 6.6e-17 90.9 104 51.9
Thecc.04G045800 Theobroma cacao HOM05D010918 ORTHO05D010815 1.9e-16 89.4 98 53.1
Haze_14937 Corylus avellana HOM05D000001 ORTHO05D000003 1.6e-15 86.3 86 57.0
QL02p069882 Quercus lobata HOM05D010918 ORTHO05D010815 6.1e-15 84.3 103 50.5
CiPaw.03G003100 Carya illinoinensis HOM05D009379 ORTHO05D010815 8.9e-14 80.5 98 49.0
COL.COLO4_13348 Corchorus olitorius HOM05D010918 ORTHO05D010815 2.0e-13 79.3 98 48.0
Cpa.g.sc70.79 Carica papaya HOM05D010918 ORTHO05D010815 7.5e-13 77.4 76 57.9
Duzib147G1198 Durio zibethinus HOM05D010918 ORTHO05D010815 2.2e-12 75.9 92 51.1
RcHm_v2.0_Chr2g0176391 Rosa chinensis HOM05D010918 ORTHO05D010815 1.9e-11 72.8 94 53.2
Gohir.D10G079900 Gossypium hirsutum HOM05D010918 ORTHO05D010815 4.1e-11 71.6 79 49.4
Lalb_Chr24g0403191 Lupinus albus HOM05D009379 ORTHO05D010815 5.4e-11 71.2 101 41.6
GSVIVG01033003001 Vitis vinifera HOM05D005312 ORTHO05D006459 5.4e-11 71.2 73 53.4
Gohir.A10G071200 Gossypium hirsutum HOM05D010918 ORTHO05D010815 7.0e-11 70.9 104 42.3
Phvul.001G086200 Phaseolus vulgaris HOM05D009379 ORTHO05D010815 7.0e-11 70.9 97 44.3
VMungo1383G0128 Vigna mungo HOM05D009379 ORTHO05D010815 9.2e-11 70.5 107 44.9
Glyma.19G101500 Glycine max HOM05D009379 ORTHO05D010815 1.2e-10 70.1 77 50.6
THA.LOC104805305 Tarenaya hassleriana HOM05D009379 ORTHO05D010815 2.7e-10 68.9 75 50.7
Phvul.004G070400 Phaseolus vulgaris HOM05D009379 ORTHO05D010815 6.0e-10 67.8 102 46.1
Thhalv10010043m.g Eutrema salsugineum HOM05D009379 ORTHO05D010815 1.3e-09 66.6 60 60.0
Gorai.011G087000 Gossypium raimondii HOM05D010918 ORTHO05D010815 1.3e-09 66.6 101 42.6
Rhsim10G0001800 Rhododendron simsii HOM05D000001 ORTHO05D000003 1.3e-09 66.6 102 43.1
Glyma.16G049700 Glycine max HOM05D009379 ORTHO05D010815 6.6e-09 64.3 77 49.4
Carub.0001s1259 Capsella rubella HOM05D009379 ORTHO05D010815 1.5e-08 63.2 85 47.1
AT1G12845 Arabidopsis thaliana HOM05D009379 ORTHO05D010815 2.5e-08 62.4 108 43.5
FAN05G3850 Fragaria x ananassa HOM05D010918 ORTHO05D010815 3.3e-08 62.0 114 43.0
C08p15710 Brassica napus HOM05D009379 ORTHO05D010815 9.5e-08 60.5 81 50.6
TAR371G1162 Trochodendron aralioides HOM05D010918 ORTHO05D010815 9.5e-08 60.5 106 41.5
BolC8t49198H Brassica oleracea HOM05D009379 ORTHO05D010815 1.2e-07 60.1 81 50.6
AL1G24490 Arabidopsis lyrata HOM05D009379 ORTHO05D010815 1.6e-07 59.7 83 47.0
BcaC05g25109 Brassica carinata HOM05D009379 ORTHO05D010815 1.6e-07 59.7 105 37.1
A08p32580 Brassica napus HOM05D009379 ORTHO05D010815 1.6e-07 59.7 81 50.6
Sed0007104 Sechium edule HOM05D010918 ORTHO05D010815 2.1e-07 59.3 97 37.1
Glyma.16G146800 Glycine max HOM05D009379 ORTHO05D010815 2.8e-07 58.9 104 41.3
TPR.G17456 Trifolium pratense HOM05D009379 ORTHO05D010815 3.6e-07 58.5 61 54.1
CARHR013170 Cardamine hirsuta HOM05D009379 ORTHO05D010815 4.7e-07 58.2 100 38.0
MD09G1004200 Malus domestica HOM05D010918 ORTHO05D010815 1.4e-06 56.6 68 54.4
Prupe.3G312500 Prunus persica HOM05D010918 ORTHO05D010815 1.8e-06 56.2 86 47.7
BraA08t35182Z Brassica rapa HOM05D009379 ORTHO05D010815 2.3e-06 55.8 81 50.6
FAN14G2957 Fragaria x ananassa HOM05D000001 ORTHO05D000003 2.3e-06 55.8 90 47.8
BcaC05g25149 Brassica carinata HOM05D009379 ORTHO05D010815 3.1e-06 55.5 55 56.4
A06p08820 Brassica napus HOM05D009379 ORTHO05D010815 3.1e-06 55.5 80 46.2
C05p10430 Brassica napus HOM05D009379 ORTHO05D010815 3.1e-06 55.5 55 56.4
BraA06t24077Z Brassica rapa HOM05D009379 ORTHO05D010815 3.1e-06 55.5 80 46.2
CANSAT64G1478 Cannabis sativa HOM05D010918 ORTHO05D010815 4.0e-06 55.1 82 47.6


User provided reference genes

Program Settings