Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.017G057400 Populus trichocarpa HOM05D006777 ORTHO05D008360 5.0e-88 327.8 170 100.0
FvH4_4g13710 Fragaria vesca HOM05D006777 ORTHO05D008360 2.0e-84 315.8 170 94.1
Duzib268G0333 Durio zibethinus HOM05D006777 ORTHO05D008360 2.6e-84 315.5 170 94.1
Glyma.05G153800 Glycine max HOM05D006777 ORTHO05D008360 2.6e-84 315.5 170 94.1
Thecc.04G200300 Theobroma cacao HOM05D006777 ORTHO05D008360 2.6e-84 315.5 170 94.1
Glyma.08G111500 Glycine max HOM05D006777 ORTHO05D008360 3.3e-84 315.1 170 94.1
HanXRQChr01g0022451 Helianthus annuus HOM05D006777 ORTHO05D008360 3.3e-84 315.1 170 93.5
Medtr8g085290 Medicago truncatula HOM05D006777 ORTHO05D008360 4.4e-84 314.7 169 94.1
Migut.G00716 Erythranthe guttata HOM05D006777 ORTHO05D008360 5.7e-84 314.3 170 93.5
Aa31LG9G3900 Aethionema arabicum HOM05D006777 ORTHO05D008360 7.4e-84 313.9 170 93.5
Manes.03G146100 Manihot esculenta HOM05D006777 ORTHO05D008360 7.4e-84 313.9 170 93.5
THA.LOC104804809 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 7.4e-84 313.9 170 93.5
RcHm_v2.0_Chr4g0414361 Rosa chinensis HOM05D006777 ORTHO05D008360 9.7e-84 313.5 170 92.9
RcHm_v2.0_Chr7g0213901 Rosa chinensis HOM05D006777 ORTHO05D008360 9.7e-84 313.5 170 92.9
SalBow8G2353 Salvia bowleyana HOM05D006777 ORTHO05D008360 9.7e-84 313.5 170 93.5
SalBow8G2632 Salvia bowleyana HOM05D006777 ORTHO05D008360 9.7e-84 313.5 170 93.5
Sc25g0003260 Simmondsia chinensis HOM05D006777 ORTHO05D008360 9.7e-84 313.5 170 92.9
THA.LOC104808706 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 9.7e-84 313.5 170 93.5
MSTRG.4231 Avicennia marina HOM05D006777 ORTHO05D008360 1.3e-83 313.2 170 92.9
Actinidia23410 Actinidia chinensis HOM05D006777 ORTHO05D008360 1.7e-83 312.8 170 92.9
Ciclev10006063m.g Citrus clementina HOM05D006777 ORTHO05D008360 3.7e-83 311.6 170 92.9
Lj4g0000567 Lotus japonicus HOM05D006777 ORTHO05D008360 3.7e-83 311.6 169 92.9
TAR362G0671 Trochodendron aralioides HOM05D006777 ORTHO05D008360 3.7e-83 311.6 170 91.8
BcaC02g09355 Brassica carinata HOM05D006777 ORTHO05D008360 6.3e-83 310.8 170 92.4
CANSAT78G1417 Cannabis sativa HOM05D006777 ORTHO05D008360 6.3e-83 310.8 170 92.9
CsaV3_2G011130 Cucumis sativus L. HOM05D006777 ORTHO05D008360 6.3e-83 310.8 170 92.9
TWI53G1099 Tripterygium wilfordii HOM05D006777 ORTHO05D008360 8.2e-83 310.5 170 91.8
CiPaw.02G065600 Carya illinoinensis HOM05D006777 ORTHO05D008360 1.4e-82 309.7 170 92.9
Solyc12g098430.2 Solanum lycopersicum HOM05D006777 ORTHO05D008360 1.4e-82 309.7 170 92.4
CSS0000801 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.8e-82 309.3 170 91.2
CDE06G2004 Ceratophyllum demersum HOM05D006777 ORTHO05D008360 1.8e-82 309.3 170 91.8
FAN22G2344 Fragaria x ananassa HOM05D006777 ORTHO05D008360 1.8e-82 309.3 176 90.9
Sopen12g033210 Solanum pennellii HOM05D006777 ORTHO05D008360 1.8e-82 309.3 170 91.8
MELO3C019533.2 Cucumis melo HOM05D006777 ORTHO05D008360 2.4e-82 308.9 170 91.8
Gohir.A02G020900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 2.4e-82 308.9 168 92.3
Gohir.D02G024900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 2.4e-82 308.9 168 92.3
Gorai.005G030800 Gossypium raimondii HOM05D006777 ORTHO05D008360 2.4e-82 308.9 168 92.3
Sed0015167 Sechium edule HOM05D006777 ORTHO05D008360 2.4e-82 308.9 170 92.4
AUR62016205 Chenopodium quinoa HOM05D006777 ORTHO05D008360 3.1e-82 308.5 168 91.1
BcaB02g08630 Brassica carinata HOM05D006777 ORTHO05D008360 4.1e-82 308.1 170 91.2
Dinv38213 Davidia involucrata HOM05D006777 ORTHO05D008360 4.1e-82 308.1 170 91.8
Psat7g074160 Pisum sativum HOM05D006777 ORTHO05D008360 4.1e-82 308.1 168 92.9
AL7G42240 Arabidopsis lyrata HOM05D006777 ORTHO05D008360 7.0e-82 307.4 170 91.2
AT4G14147 Arabidopsis thaliana HOM05D006777 ORTHO05D008360 7.0e-82 307.4 170 91.2
Carub.0007s2827 Capsella rubella HOM05D006777 ORTHO05D008360 7.0e-82 307.4 170 91.2
MD04G1012700 Malus domestica HOM05D006777 ORTHO05D008360 7.0e-82 307.4 170 91.2
Os03g0848300 Oryza sativa ssp. japonica HOM05D006777 ORTHO05D008360 7.0e-82 307.4 170 90.6
TPR.G11902 Trifolium pratense HOM05D006777 ORTHO05D008360 9.1e-82 307.0 170 91.2
Prupe.1G158800 Prunus persica HOM05D006777 ORTHO05D008360 1.2e-81 306.6 170 90.6
GSVIVG01020914001 Vitis vinifera HOM05D006777 ORTHO05D008360 1.6e-81 306.2 169 91.1
Sp7g12000 Schrenkiella parvula HOM05D006777 ORTHO05D008360 2.0e-81 305.8 170 90.6
PSO063G4325 Papaver somniferum HOM05D006777 ORTHO05D008360 2.6e-81 305.4 170 90.6
Thhalv10026384m.g Eutrema salsugineum HOM05D006777 ORTHO05D008360 3.5e-81 305.1 170 90.6
PSO017G6923 Papaver somniferum HOM05D006777 ORTHO05D008360 3.5e-81 305.1 170 90.0
Atru.chr4.1633 Acer truncatum HOM05D006777 ORTHO05D008360 4.5e-81 304.7 170 90.6
PGR083G1334 Punica granatum HOM05D006777 ORTHO05D008360 7.7e-81 303.9 170 91.2
Hund11971 Selenicereus undatus HOM05D006777 ORTHO05D008360 7.7e-81 303.9 166 92.2
ATR1147G041 Amborella trichopoda HOM05D006777 ORTHO05D008360 1.0e-80 303.5 170 89.4
arahy.Tifrunner.gnm1.ann1.QE6BNJ Arachis hypogaea HOM05D006777 ORTHO05D008360 6.5e-80 300.8 183 85.8
FAN12G2838 Fragaria x ananassa HOM05D006777 ORTHO05D008360 8.5e-80 300.4 170 91.2
HPP92_006972 Vanilla planifolia HOM05D006777 ORTHO05D008360 8.5e-80 300.4 170 88.8
DCAR_026626 Daucus carota HOM05D006777 ORTHO05D008360 1.5e-79 299.7 166 90.4
FAN07G2803 Fragaria x ananassa HOM05D006777 ORTHO05D008360 1.5e-79 299.7 190 84.2
arahy.Tifrunner.gnm1.ann1.GXV5N1 Arachis hypogaea HOM05D006777 ORTHO05D008360 2.5e-79 298.9 183 85.2
C04p41680 Brassica napus HOM05D006777 ORTHO05D008360 3.2e-79 298.5 169 90.5
Aqoxy5G00004 Aquilegia oxysepala HOM05D006777 ORTHO05D008360 5.5e-79 297.7 165 89.1
Nitab4.5_0000676g0120 Nicotiana tabacum HOM05D006777 ORTHO05D008360 5.5e-79 297.7 170 89.4
Mapoly0060s0011 Marchantia polymorpha HOM05D006777 ORTHO05D008360 1.6e-78 296.2 170 87.1
A04p08010 Brassica napus HOM05D006777 ORTHO05D008360 2.7e-78 295.4 169 89.3
Lalb_Chr12g0205521 Lupinus albus HOM05D006777 ORTHO05D008360 4.7e-78 294.7 168 87.5
Zm00001eb210820 Zea mays HOM05D006777 ORTHO05D008360 1.8e-77 292.7 188 80.3
Eucgr.H02768 Eucalyptus grandis HOM05D006777 ORTHO05D008360 6.7e-77 290.8 157 93.6
Lsat_1_v5_gn_1_72060 Lactuca sativa HOM05D006777 ORTHO05D008360 5.7e-76 287.7 157 92.4
Pp3c3_19880 Physcomitrium patens HOM05D006777 ORTHO05D008360 2.8e-75 285.4 168 85.7
FAN17G1701 Fragaria x ananassa HOM05D006777 ORTHO05D008360 3.7e-75 285.0 175 86.3
Sabra17G0050600 Salix brachista HOM05D006777 ORTHO05D008360 3.1e-74 282.0 147 99.3
SMO146G0157 Selaginella moellendorffii HOM05D006777 ORTHO05D008360 3.1e-74 282.0 167 85.0
ClCG06G008050 Citrullus lanatus HOM05D006777 ORTHO05D008360 9.1e-74 280.4 162 88.9
MELO3C020359.2 Cucumis melo HOM05D006777 ORTHO05D008360 3.5e-73 278.5 151 93.4
Duzib212G0541 Durio zibethinus HOM05D006777 ORTHO05D008360 7.7e-73 277.3 147 95.2
unitig_37.g12031 Utricularia gibba HOM05D006777 ORTHO05D008360 1.3e-72 276.6 151 91.4
AagrBONN_evm.TU.Sc2ySwM_228.5073 Anthoceros agrestis HOM05D006777 ORTHO05D008360 6.5e-72 274.2 164 84.8
Lalb_Chr07g0186741 Lupinus albus HOM05D006777 ORTHO05D008360 6.5e-72 274.2 150 90.7
CsaV3_3G018320 Cucumis sativus L. HOM05D006777 ORTHO05D008360 4.2e-71 271.6 147 93.9
CBR_g4477 Chara braunii HOM05D006777 ORTHO05D008360 2.6e-68 262.3 169 75.7
Actinidia35856 Actinidia chinensis HOM05D006777 ORTHO05D008360 2.2e-67 259.2 140 91.4
Hma1.2p1_0187F.1_g082390 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 4.8e-67 258.1 139 92.8
SGA_v2.0_scaffold14G07057 Striga asiatica HOM05D006777 ORTHO05D008360 4.8e-67 258.1 262 59.2
BolC4t25746H Brassica oleracea HOM05D006777 ORTHO05D008360 6.3e-67 257.7 139 92.1
Nn1g07943 Nelumbo nucifera HOM05D006777 ORTHO05D008360 8.3e-67 257.3 140 91.4
BraA04t16489Z Brassica rapa HOM05D006777 ORTHO05D008360 5.4e-66 254.6 139 90.6
Peaxi162Scf00652g00116 Petunia axillaris HOM05D006777 ORTHO05D008360 4.5e-65 251.5 170 78.2
Nitab4.5_0000850g0170 Nicotiana tabacum HOM05D006777 ORTHO05D008360 1.5e-63 246.5 164 78.7
EL10Ac3g05505 Beta vulgaris HOM05D006777 ORTHO05D008360 5.2e-61 238.0 170 75.9
COL.COLO4_20174 Corchorus olitorius HOM05D001598 ORTHO05D002757 5.2e-61 238.0 128 93.8
Dinv27219 Davidia involucrata HOM05D006777 ORTHO05D008360 2.0e-60 236.1 170 75.9
PGSC0003DMG402004570 Solanum tuberosum HOM05D006777 ORTHO05D008360 4.4e-60 235.0 130 92.3
AUR62039283 Chenopodium quinoa HOM05D006777 ORTHO05D008360 7.5e-60 234.2 168 74.4
SGA_v2.0_scaffold4G02170 Striga asiatica HOM05D006777 ORTHO05D008360 2.0e-57 226.1 233 59.7
Lj6A528G35 Lonicera japonica HOM05D006777 ORTHO05D008360 2.7e-57 225.7 125 92.8
Haze_11625 Corylus avellana HOM05D006777 ORTHO05D008360 4.5e-57 224.9 229 60.7
CSS0009293 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 2.9e-56 222.2 123 92.7
CSS0028561 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 2.9e-56 222.2 123 92.7
SHI07424 Sapria himalayana HOM05D006777 ORTHO05D008360 7.3e-55 217.6 129 85.3
Haze_27630 Corylus avellana HOM05D006777 ORTHO05D008360 8.3e-51 204.1 169 61.5
Hma1.2p1_0187F.1_g082380 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 5.4e-50 201.4 109 93.6
CARHR220180 Cardamine hirsuta HOM05D006777 ORTHO05D008360 9.2e-50 200.7 110 91.8
QL06p026356 Quercus lobata HOM05D000003 ORTHO05D008360 2.2e-43 179.5 115 81.7
Cre06.g260800 Chlamydomonas reinhardtii HOM05D006777 ORTHO05D008360 1.2e-41 173.7 176 51.7
Hund03125 Selenicereus undatus HOM05D006777 ORTHO05D008360 3.3e-39 165.6 170 57.6
vmacro00459 Vaccinium macrocarpon HOM05D006777 ORTHO05D008360 2.3e-32 142.9 117 65.8
ECA248G0011 Erigeron canadensis HOM05D006777 ORTHO05D008360 6.6e-32 141.4 75 93.3
CAN.G767.6 Capsicum annuum HOM05D006777 ORTHO05D008360 1.1e-31 140.6 75 92.0
Sed0006533 Sechium edule HOM05D006777 ORTHO05D008360 3.6e-30 135.6 76 86.8
Lj3P402T13 Lonicera japonica HOM05D006777 ORTHO05D008360 6.0e-25 118.2 73 79.5
Cc00_g31310 Coffea canephora HOM05D006777 ORTHO05D008360 6.6e-24 114.8 90 67.8
Cpa.g.c27575.2 Carica papaya HOM05D006777 ORTHO05D008360 1.2e-22 110.5 60 88.3
Cc03_g11170 Coffea canephora HOM05D006777 ORTHO05D008360 4.2e-18 95.5 50 88.0
CSS0011736 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 3.8e-11 72.4 38 81.6
CSS0009674 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.0e-08 64.3 39 74.4
Lj3A409T19 Lonicera japonica HOM05D006777 ORTHO05D008360 5.6e-07 58.5 55 58.2


User provided reference genes

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