Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.017G056400 Populus trichocarpa HOM05D005998 ORTHO05D007664 4.8e-147 525.0 387 100.0
Sabra17G0050000 Salix brachista HOM05D005998 ORTHO05D007664 2.5e-119 433.0 387 87.6
Sabra17G0048300 Salix brachista HOM05D005998 ORTHO05D007664 2.3e-104 383.3 356 88.2
Manes.13G057500 Manihot esculenta HOM05D005998 ORTHO05D007664 4.6e-89 332.4 384 76.0
Atru.chr6.3489 Acer truncatum HOM05D005998 ORTHO05D007664 2.0e-84 317.0 376 70.5
TWI75G0247 Tripterygium wilfordii HOM05D005998 ORTHO05D007664 5.8e-84 315.5 384 64.8
Thecc.01G205300 Theobroma cacao HOM05D005998 ORTHO05D007664 7.9e-81 305.1 384 66.7
Ciclev10015543m.g Citrus clementina HOM05D005998 ORTHO05D007664 9.6e-79 298.1 377 67.9
Actinidia23131 Actinidia chinensis HOM05D005998 ORTHO05D007664 1.3e-78 297.7 385 65.7
TAR362G0769 Trochodendron aralioides HOM05D005998 ORTHO05D007664 4.8e-78 295.8 384 70.1
Lj2A1109T75 Lonicera japonica HOM05D005998 ORTHO05D007664 4.9e-75 285.8 385 49.1
COL.COLO4_29925 Corchorus olitorius HOM05D005998 ORTHO05D007664 6.4e-75 285.4 386 63.0
CSS0043446 Camellia sinensis var. sinensis HOM05D005998 ORTHO05D007664 8.4e-75 285.0 352 69.3
AT3G07550 Arabidopsis thaliana HOM05D005998 ORTHO05D007664 1.3e-72 277.7 376 63.6
BraA05t22797Z Brassica rapa HOM05D005998 ORTHO05D007664 2.3e-72 276.9 378 56.6
Gohir.D11G153100 Gossypium hirsutum HOM05D005998 ORTHO05D007664 3.0e-72 276.6 376 63.8
Gorai.007G162000 Gossypium raimondii HOM05D005998 ORTHO05D007664 3.0e-72 276.6 376 63.8
Prupe.8G184400 Prunus persica HOM05D005998 ORTHO05D007664 3.0e-72 276.6 376 65.7
PGR083G1807 Punica granatum HOM05D005998 ORTHO05D007664 3.9e-72 276.2 374 64.4
Gohir.A11G144800 Gossypium hirsutum HOM05D005998 ORTHO05D007664 1.5e-71 274.2 376 63.8
Sp3g06470 Schrenkiella parvula HOM05D005998 ORTHO05D007664 2.5e-71 273.5 376 62.0
AL3G18890 Arabidopsis lyrata HOM05D005998 ORTHO05D007664 4.8e-70 269.2 376 62.8
BolC5t34631H Brassica oleracea HOM05D005998 ORTHO05D007664 8.2e-70 268.5 376 66.5
C05p59770 Brassica napus HOM05D005998 ORTHO05D007664 1.1e-69 268.1 376 66.2
RcHm_v2.0_Chr6g0281791 Rosa chinensis HOM05D005998 ORTHO05D007664 1.1e-69 268.1 373 67.0
Thhalv10020882m.g Eutrema salsugineum HOM05D005998 ORTHO05D007664 3.1e-69 266.5 376 62.0
BcaC05g29548 Brassica carinata HOM05D005998 ORTHO05D007664 1.7e-67 260.8 289 57.1
PSO573G0021 Papaver somniferum HOM05D005998 ORTHO05D007664 1.7e-67 260.8 373 57.1
A05p40660 Brassica napus HOM05D005998 ORTHO05D007664 2.9e-67 260.0 377 54.6
CANSAT25G0419 Cannabis sativa HOM05D005998 ORTHO05D007664 3.8e-67 259.6 371 61.2
BcaC05g29549 Brassica carinata HOM05D005998 ORTHO05D007664 8.4e-67 258.5 293 63.5
Carub.0003s0710 Capsella rubella HOM05D005998 ORTHO05D007664 1.2e-65 254.6 375 59.2
QL09p045684 Quercus lobata HOM05D005998 ORTHO05D007664 1.2e-65 254.6 387 60.5
PSO017G2023 Papaver somniferum HOM05D005998 ORTHO05D007664 2.1e-65 253.8 291 60.1
Sc05g0001600 Simmondsia chinensis HOM05D005998 ORTHO05D007664 2.1e-65 253.8 380 46.6
Nitab4.5_0003952g0080 Nicotiana tabacum HOM05D005998 ORTHO05D007664 2.3e-64 250.4 384 57.0
THA.LOC104819025 Tarenaya hassleriana HOM05D005998 ORTHO05D007664 2.3e-64 250.4 385 59.7
Cpa.g.sc8.24 Carica papaya HOM05D005998 ORTHO05D007664 5.1e-64 249.2 368 58.4
HanXRQChr10g0281201 Helianthus annuus HOM05D005998 ORTHO05D007664 1.9e-63 247.3 375 44.3
Nitab4.5_0002641g0010 Nicotiana tabacum HOM05D005998 ORTHO05D007664 2.5e-63 246.9 384 56.8
Cc02_g30680 Coffea canephora HOM05D005998 ORTHO05D007664 4.3e-63 246.1 379 52.8
FvH4_2g17281 Fragaria vesca HOM05D005998 ORTHO05D007664 4.3e-63 246.1 372 64.2
Peaxi162Scf00372g00061 Petunia axillaris HOM05D005998 ORTHO05D007664 4.8e-62 242.7 374 56.1
PGSC0003DMG400020641 Solanum tuberosum HOM05D005998 ORTHO05D007664 8.2e-62 241.9 384 55.5
MD05G1151800 Malus domestica HOM05D005998 ORTHO05D007664 1.4e-61 241.1 374 60.7
ECA236G1847 Erigeron canadensis HOM05D005998 ORTHO05D007664 3.1e-61 240.0 374 38.0
Solyc06g007680.1 Solanum lycopersicum HOM05D005998 ORTHO05D007664 1.5e-60 237.7 384 56.5
Aa31LG5G18090 Aethionema arabicum HOM05D005998 ORTHO05D007664 3.4e-60 236.5 288 53.1
Eucgr.H00683 Eucalyptus grandis HOM05D005998 ORTHO05D007664 7.7e-60 235.3 385 61.6
CAN.G181.48 Capsicum annuum HOM05D005998 ORTHO05D007664 1.3e-59 234.6 384 45.3
Sopen06g002580 Solanum pennellii HOM05D005998 ORTHO05D007664 3.8e-59 233.0 384 55.2
Nn1g09548 Nelumbo nucifera HOM05D005998 ORTHO05D007664 8.8e-56 221.9 253 69.2
Duzib211G0440 Durio zibethinus HOM05D005998 ORTHO05D007664 1.1e-55 221.5 304 74.3
EL10Ac5g10571 Beta vulgaris HOM05D005998 ORTHO05D007664 8.2e-54 215.3 281 45.2
Migut.N00691 Erythranthe guttata HOM05D005998 ORTHO05D007664 1.1e-53 214.9 375 42.1
CARHR082230 Cardamine hirsuta HOM05D005998 ORTHO05D007664 1.4e-53 214.5 376 55.6
PSO573G0042 Papaver somniferum HOM05D005998 ORTHO05D007664 6.1e-49 199.1 373 48.8
Lsat_1_v5_gn_8_98580 Lactuca sativa HOM05D005998 ORTHO05D007664 3.0e-48 196.8 372 44.1
AUR62008051 Chenopodium quinoa HOM05D005998 ORTHO05D007664 1.1e-47 194.9 384 56.5
PSO017G6055 Papaver somniferum HOM05D005998 ORTHO05D007664 4.4e-47 193.0 323 53.9
Hma1.2p1_1756F.1_g301020 Hydrangea macrophylla HOM05D005998 ORTHO05D007664 7.4e-47 192.2 300 49.3
AUR62028626 Chenopodium quinoa HOM05D005998 ORTHO05D007664 2.8e-46 190.3 326 48.5
Haze_03601 Corylus avellana HOM05D005998 ORTHO05D007664 2.8e-46 190.3 385 42.1
PSO573G0007 Papaver somniferum HOM05D005998 ORTHO05D007664 3.7e-46 189.9 323 52.6
Medtr8g028140 Medicago truncatula HOM05D005998 ORTHO05D007664 2.5e-42 177.2 385 59.0
Psat4g158400 Pisum sativum HOM05D005998 ORTHO05D007664 2.5e-42 177.2 385 59.2
Lj3g0009731 Lotus japonicus HOM05D005998 ORTHO05D007664 3.2e-42 176.8 377 58.4
Ca_23566_v3 Cicer arietinum L. HOM05D005998 ORTHO05D007664 3.6e-41 173.3 376 60.9
HPP92_024394 Vanilla planifolia HOM05D005998 ORTHO05D007664 5.7e-39 166.0 287 50.9
TPR.G5126 Trifolium pratense HOM05D005998 ORTHO05D007664 7.4e-39 165.6 300 53.3
SEGI_17775 Sequoiadendron giganteum HOM05D005998 ORTHO05D007664 1.7e-38 164.5 297 43.4
Glyma.07G060100 Glycine max HOM05D005998 ORTHO05D007664 2.2e-38 164.1 377 59.4
Cfa010674 Carpinus fangiana HOM05D005998 ORTHO05D007664 3.1e-37 160.2 279 47.3
HanXRQChr08g0231291 Helianthus annuus HOM05D005998 ORTHO05D007664 6.5e-35 152.5 293 43.0
HanXRQChr08g0231301 Helianthus annuus HOM05D005998 ORTHO05D007664 6.5e-35 152.5 293 43.0
Lsat_1_v5_gn_4_46380 Lactuca sativa HOM05D005998 ORTHO05D007664 6.5e-35 152.5 294 47.6
PSO017G3521 Papaver somniferum HOM05D005998 ORTHO05D007664 3.6e-33 146.7 297 42.4
HanXRQChr08g0231281 Helianthus annuus HOM05D005998 ORTHO05D007664 2.3e-32 144.1 289 42.6
Dinv28780 Davidia involucrata HOM05D005998 ORTHO05D003775 2.6e-31 140.6 166 68.7
ECA247G3308 Erigeron canadensis HOM05D005998 ORTHO05D007664 4.1e-29 133.3 300 38.7
RcHm_v2.0_Chr5g0064201 Rosa chinensis HOM05D005998 ORTHO05D007664 5.9e-28 129.4 166 53.0
DCAR_000509 Daucus carota HOM05D005998 ORTHO05D007664 6.5e-27 125.9 238 61.8
MD10G1146000 Malus domestica HOM05D005998 ORTHO05D007664 5.5e-26 122.9 283 51.2
ATR0743G036 Amborella trichopoda HOM05D005998 ORTHO05D007664 3.6e-25 120.2 277 44.0
RcHm_v2.0_Chr7g0205731 Rosa chinensis HOM05D005998 ORTHO05D007664 1.8e-24 117.9 82 68.3
ECA247G1983 Erigeron canadensis HOM05D005998 ORTHO05D007664 8.8e-24 115.5 310 30.6
Os11g0264200 Oryza sativa ssp. japonica HOM05D005998 ORTHO05D007664 2.6e-23 114.0 291 43.6
PSO017G0196 Papaver somniferum HOM05D005998 ORTHO05D007664 4.4e-23 113.2 287 37.6
Duzib138G0171 Durio zibethinus HOM05D005998 ORTHO05D007664 1.3e-22 111.7 82 64.6
PSO675G7594 Papaver somniferum HOM05D005998 ORTHO05D007664 6.3e-22 109.4 287 37.6
ECA247G2512 Erigeron canadensis HOM05D005998 ORTHO05D007664 5.4e-21 106.3 304 30.3
Zm00001eb112540 Zea mays HOM05D005998 ORTHO05D007664 5.4e-21 106.3 291 43.0
PSO541G3130 Papaver somniferum HOM05D005998 ORTHO05D007664 9.1e-21 105.5 308 36.4
Mapoly0166s0007 Marchantia polymorpha HOM05D005998 ORTHO05D007664 2.3e-16 90.9 289 39.8
PSO675G8174 Papaver somniferum HOM05D005998 ORTHO05D007664 4.0e-16 90.1 286 37.1
CDE08G0319 Ceratophyllum demersum HOM05D005998 ORTHO05D007664 8.9e-16 89.0 82 48.8
PSO218G0001 Papaver somniferum HOM05D005998 ORTHO05D007664 1.5e-15 88.2 287 36.6
PSO340G0001 Papaver somniferum HOM05D005998 ORTHO05D007664 1.5e-15 88.2 287 36.6
PSO675G6053 Papaver somniferum HOM05D005998 ORTHO05D007664 1.5e-15 88.2 287 36.6
PSO675G6885 Papaver somniferum HOM05D005998 ORTHO05D007664 1.5e-15 88.2 287 36.6
ECA232G4734 Erigeron canadensis HOM05D005998 ORTHO05D007664 4.4e-15 86.7 288 35.1
PSO837G0015 Papaver somniferum HOM05D005998 ORTHO05D007664 1.3e-14 85.1 316 35.8
PSO017G6716 Papaver somniferum HOM05D005998 ORTHO05D007664 2.2e-14 84.3 167 35.3
PSO837G0060 Papaver somniferum HOM05D005998 ORTHO05D007664 2.8e-14 84.0 294 34.4
Rhsim13G0055600 Rhododendron simsii HOM05D005998 ORTHO05D007664 2.8e-14 84.0 290 27.6
PSO017G5443 Papaver somniferum HOM05D005998 ORTHO05D007664 4.9e-14 83.2 251 38.6
Zm00001eb182340 Zea mays HOM05D005998 ORTHO05D015715 1.8e-13 81.3 83 50.6
Zm00001eb048880 Zea mays HOM05D005998 ORTHO05D015715 4.1e-13 80.1 83 49.4
Oeu064702.2 Olea europaea HOM05D005998 ORTHO05D007664 2.3e-11 74.3 73 49.3
PSO017G6639 Papaver somniferum HOM05D005998 ORTHO05D007664 5.0e-11 73.2 140 36.4
ECA247G2923 Erigeron canadensis HOM05D005998 ORTHO05D003386 6.6e-11 72.8 274 45.6
PSO017G4719 Papaver somniferum HOM05D005998 ORTHO05D007664 2.5e-10 70.9 169 34.3
PSO017G0268 Papaver somniferum HOM05D005998 ORTHO05D007664 3.3e-10 70.5 169 32.5
PSO017G2859 Papaver somniferum HOM05D005998 ORTHO05D007664 7.3e-10 69.3 163 32.5
HanXRQChr16g0508881 Helianthus annuus HOM05D001905 ORTHO05D001820 9.5e-10 68.9 153 32.0
ECA247G3549 Erigeron canadensis HOM05D005998 ORTHO05D007664 2.1e-09 67.8 287 40.8
Sabra14G0133400 Salix brachista HOM05D003340 ORTHO05D003775 6.1e-09 66.2 55 61.8
Lsat_1_v5_gn_1_22481 Lactuca sativa HOM05D001905 ORTHO05D001820 2.3e-08 64.3 151 35.1
PSO017G7250 Papaver somniferum HOM05D005998 ORTHO05D007664 2.3e-08 64.3 168 35.1
Sabra02G0096400 Salix brachista HOM05D001905 ORTHO05D001820 2.0e-07 61.2 138 34.8
Migut.C00532 Erythranthe guttata HOM05D001905 ORTHO05D001820 5.8e-07 59.7 141 32.6
ECA247G1907 Erigeron canadensis HOM05D005998 ORTHO05D007664 9.8e-07 58.9 67 44.8
Atru.chr3.257 Acer truncatum HOM05D001905 ORTHO05D001820 1.3e-06 58.5 147 34.0
Sp5g12030 Schrenkiella parvula HOM05D001905 ORTHO05D001820 1.7e-06 58.2 143 33.6
Actinidia38080 Actinidia chinensis HOM05D001905 ORTHO05D001820 3.7e-06 57.0 141 30.5
Sabra14G0016100 Salix brachista HOM05D001905 ORTHO05D001820 3.7e-06 57.0 142 33.1
Actinidia08271 Actinidia chinensis HOM05D001905 ORTHO05D001820 4.9e-06 56.6 141 31.2
Potri.002G123100 Populus trichocarpa HOM05D001905 ORTHO05D001820 4.9e-06 56.6 142 34.5
ECA247G1593 Erigeron canadensis HOM05D005998 ORTHO05D007664 6.4e-06 56.2 238 26.1
Ciclev10000831m.g Citrus clementina HOM05D001905 ORTHO05D001820 8.3e-06 55.8 138 34.8
Sed0026100 Sechium edule HOM05D001905 ORTHO05D001820 8.3e-06 55.8 143 32.9
TWI36G1711 Tripterygium wilfordii HOM05D001905 ORTHO05D001820 8.3e-06 55.8 142 31.7


User provided reference genes

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