Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.017G050900 Populus trichocarpa HOM05D006342 ORTHO05D008155 7.1e-226 786.9 402 100.0
Sabra17G0042600 Salix brachista HOM05D006342 ORTHO05D008155 2.8e-190 668.7 406 86.5
Sabra17G0037900 Salix brachista HOM05D006342 ORTHO05D008155 3.2e-186 655.2 448 78.6
Sabra17G0037300 Salix brachista HOM05D006342 ORTHO05D008155 3.3e-183 645.2 355 92.1
Manes.07G034700 Manihot esculenta HOM05D006342 ORTHO05D008155 4.9e-150 535.0 396 70.2
QL11p022820 Quercus lobata HOM05D006342 ORTHO05D008155 8.9e-144 514.2 402 67.9
Ciclev10028615m.g Citrus clementina HOM05D006342 ORTHO05D008155 1.9e-138 496.5 375 69.6
Gorai.005G222500 Gossypium raimondii HOM05D006342 ORTHO05D008155 2.1e-137 493.0 386 68.9
Lj4g0023834 Lotus japonicus HOM05D006342 ORTHO05D008155 8.0e-137 491.1 410 65.4
Gohir.D02G198600 Gossypium hirsutum HOM05D006342 ORTHO05D008155 3.1e-136 489.2 386 68.7
Prupe.8G064500 Prunus persica HOM05D006342 ORTHO05D008155 1.5e-135 486.9 395 65.3
Gohir.A03G175100 Gossypium hirsutum HOM05D006342 ORTHO05D008155 2.6e-135 486.1 377 69.8
TWI23G0792 Tripterygium wilfordii HOM05D006342 ORTHO05D008155 1.1e-133 480.7 396 65.4
Thecc.02G134500 Theobroma cacao HOM05D006342 ORTHO05D008155 9.2e-133 477.6 395 64.8
Actinidia24004 Actinidia chinensis HOM05D006342 ORTHO05D008155 4.6e-132 475.3 401 64.1
Duzib052G0010 Durio zibethinus HOM05D006342 ORTHO05D008155 6.6e-131 471.5 412 63.3
Lalb_Chr05g0217591 Lupinus albus HOM05D006342 ORTHO05D008155 8.6e-131 471.1 400 65.0
Eucgr.G00932 Eucalyptus grandis HOM05D006342 ORTHO05D008155 1.9e-130 469.9 403 61.3
CSS0025541 Camellia sinensis var. sinensis HOM05D006342 ORTHO05D008155 3.3e-130 469.2 396 65.4
Dinv24174 Davidia involucrata HOM05D006342 ORTHO05D008155 7.3e-130 468.0 336 71.4
Atru.chr6.1184 Acer truncatum HOM05D006342 ORTHO05D008155 2.1e-129 466.5 426 63.1
Peaxi162Scf01060g00128 Petunia axillaris HOM05D006342 ORTHO05D008155 2.8e-129 466.1 368 68.5
Glyma.08G070600 Glycine max HOM05D006342 ORTHO05D008155 1.4e-128 463.8 399 64.7
Psat7g100320 Pisum sativum HOM05D006342 ORTHO05D008155 2.3e-128 463.0 395 63.3
GSVIVG01015772001 Vitis vinifera HOM05D006342 ORTHO05D008155 2.3e-128 463.0 373 65.4
Glyma.13G042800 Glycine max HOM05D006342 ORTHO05D008155 3.1e-128 462.6 399 64.2
Rhsim11G0137800 Rhododendron simsii HOM05D006342 ORTHO05D008155 3.1e-128 462.6 415 61.7
VMungo0251G1514 Vigna mungo HOM05D006342 ORTHO05D008155 5.2e-128 461.8 383 64.5
RhsimUnG0187900 Rhododendron simsii HOM05D006342 ORTHO05D008155 1.2e-127 460.7 415 61.7
RcHm_v2.0_Chr2g0143381 Rosa chinensis HOM05D006342 ORTHO05D008155 1.5e-127 460.3 395 63.3
Hma1.2p1_0522F.1_g171800 Hydrangea macrophylla HOM05D006342 ORTHO05D008155 2.0e-127 459.9 325 73.5
CiPaw.05G033400 Carya illinoinensis HOM05D006342 ORTHO05D008155 1.3e-126 457.2 402 61.4
Ca_18366_v3 Cicer arietinum L. HOM05D003001 ORTHO05D003494 1.7e-126 456.8 397 62.0
DCAR_003711 Daucus carota HOM05D006342 ORTHO05D008155 1.7e-126 456.8 370 65.7
Medtr4g094100 Medicago truncatula HOM05D006342 ORTHO05D008155 1.7e-126 456.8 322 72.4
Nitab4.5_0000863g0140 Nicotiana tabacum HOM05D006342 ORTHO05D008155 2.2e-126 456.4 317 73.8
FvH4_6g33511 Fragaria vesca HOM05D006342 ORTHO05D008155 2.9e-126 456.1 397 63.7
FAN02G0548 Fragaria x ananassa HOM05D006342 ORTHO05D008155 8.3e-126 454.5 408 60.3
Nn5g30026 Nelumbo nucifera HOM05D006342 ORTHO05D008155 8.3e-126 454.5 311 73.3
TPR.G35344 Trifolium pratense HOM05D006342 ORTHO05D008155 8.3e-126 454.5 316 73.1
MELO3C018621.2 Cucumis melo HOM05D006342 ORTHO05D008155 2.4e-125 453.0 395 61.8
Carub.0002s0473 Capsella rubella HOM05D006342 ORTHO05D008155 4.1e-125 452.2 315 72.7
CsaV3_7G006740 Cucumis sativus L. HOM05D006342 ORTHO05D008155 4.1e-125 452.2 396 62.6
PGR042G1699 Punica granatum HOM05D006342 ORTHO05D008155 5.4e-125 451.8 378 63.8
Nitab4.5_0003959g0010 Nicotiana tabacum HOM05D006342 ORTHO05D008155 7.1e-125 451.4 317 73.8
AL2G16000 Arabidopsis lyrata HOM05D006342 ORTHO05D008155 1.2e-124 450.7 303 74.6
Sopen01g047960 Solanum pennellii HOM05D006342 ORTHO05D008155 2.7e-124 449.5 378 66.4
CAN.G523.45 Capsicum annuum HOM05D006342 ORTHO05D008155 7.8e-124 448.0 373 65.1
Oeu042410.2 Olea europaea HOM05D006342 ORTHO05D008155 1.3e-123 447.2 310 72.6
TAR628G1271 Trochodendron aralioides HOM05D006342 ORTHO05D008155 1.3e-123 447.2 302 73.8
arahy.Tifrunner.gnm1.ann1.U7PRNJ Arachis hypogaea HOM05D006342 ORTHO05D008155 1.7e-123 446.8 315 73.0
PGSC0003DMG400012575 Solanum tuberosum HOM05D006342 ORTHO05D008155 8.6e-123 444.5 379 64.4
AT1G60600 Arabidopsis thaliana HOM05D006342 ORTHO05D008155 1.1e-122 444.1 303 73.6
CANSAT21G1086 Cannabis sativa HOM05D006342 ORTHO05D008155 4.3e-122 442.2 395 61.8
PSO447G0017 Papaver somniferum HOM05D006342 ORTHO05D008155 4.3e-122 442.2 312 70.8
ECA234G3624 Erigeron canadensis HOM05D006342 ORTHO05D008155 5.6e-122 441.8 371 63.1
MSTRG.16600 Avicennia marina HOM05D006342 ORTHO05D008155 2.1e-121 439.9 395 58.7
Thhalv10023528m.g Eutrema salsugineum HOM05D006342 ORTHO05D008155 4.7e-121 438.7 303 72.6
Lj9A350G66 Lonicera japonica HOM05D006342 ORTHO05D008155 4.7e-121 438.7 369 65.9
BcaB04g20275 Brassica carinata HOM05D006342 ORTHO05D008155 6.2e-121 438.3 303 72.9
Cc02_g21250 Coffea canephora HOM05D006342 ORTHO05D008155 4.0e-120 435.6 340 65.3
HanXRQChr10g0303621 Helianthus annuus HOM05D006342 ORTHO05D008155 4.4e-119 432.2 396 59.3
Lsat_1_v5_gn_5_108680 Lactuca sativa HOM05D006342 ORTHO05D008155 1.7e-118 430.3 378 62.4
MD10G1052500 Malus domestica HOM05D006342 ORTHO05D008155 4.9e-118 428.7 402 60.4
COL.COLO4_32304 Corchorus olitorius HOM05D006342 ORTHO05D008155 6.4e-118 428.3 290 74.1
Aa31LG2G9860 Aethionema arabicum HOM05D006342 ORTHO05D008155 8.4e-118 427.9 303 71.6
A01p29370 Brassica napus HOM05D006342 ORTHO05D008155 8.4e-118 427.9 304 71.4
BolC1t03681H Brassica oleracea HOM05D006342 ORTHO05D008155 1.1e-117 427.6 317 69.7
AUR62013159 Chenopodium quinoa HOM05D006342 ORTHO05D008155 5.4e-117 425.2 326 66.6
BraA01t03071Z Brassica rapa HOM05D006342 ORTHO05D008155 7.1e-117 424.9 304 71.4
Cpa.g.sc42.26 Carica papaya HOM05D006342 ORTHO05D008155 7.1e-117 424.9 280 77.5
BcaC09g49390 Brassica carinata HOM05D006342 ORTHO05D008155 1.6e-116 423.7 317 69.4
AUR62010160 Chenopodium quinoa HOM05D006342 ORTHO05D008155 1.6e-116 423.7 322 66.8
C01p37160 Brassica napus HOM05D006342 ORTHO05D008155 2.1e-116 423.3 316 68.7
EL10Ac9g21517 Beta vulgaris HOM05D006342 ORTHO05D008155 1.0e-115 421.0 401 57.6
Migut.B00584 Erythranthe guttata HOM05D006342 ORTHO05D008155 1.0e-115 421.0 311 67.8
Sc15g0003050 Simmondsia chinensis HOM05D006342 ORTHO05D008155 4.3e-114 415.6 332 65.1
SGA_v2.0_scaffold83G26327 Striga asiatica HOM05D006342 ORTHO05D008155 9.6e-114 414.5 313 66.8
arahy.Tifrunner.gnm1.ann1.XZGJ82 Arachis hypogaea HOM05D006342 ORTHO05D008155 8.1e-113 411.4 309 70.2
ClCG09G015650 Citrullus lanatus HOM05D006342 ORTHO05D008155 5.8e-111 405.2 354 61.6
SalBow5G5605 Salvia bowleyana HOM05D006342 ORTHO05D008155 7.6e-111 404.8 311 65.9
unitig_0.g609 Utricularia gibba HOM05D006342 ORTHO05D008190 7.6e-111 404.8 315 66.0
THA.LOC104799883 Tarenaya hassleriana HOM05D006342 ORTHO05D008155 4.9e-110 402.1 360 61.9
Solyc01g105460.4 Solanum lycopersicum HOM05D006342 ORTHO05D008155 4.2e-109 399.1 345 63.8
Os03g0190100 Oryza sativa ssp. japonica HOM05D006342 ORTHO05D008155 3.0e-107 392.9 315 65.1
MBI05_g05612_MAGBIO Magnolia biondii HOM05D006342 ORTHO05D008155 2.5e-106 389.8 287 70.0
Migut.B01155 Erythranthe guttata HOM05D006342 ORTHO05D008155 5.6e-106 388.7 317 62.8
vmacro01839 Vaccinium macrocarpon HOM05D006342 ORTHO05D008155 5.6e-106 388.7 460 50.9
MSTRG.20291 Avicennia marina HOM05D006342 ORTHO05D008155 6.0e-100 368.6 414 49.8
FAN09G1871 Fragaria x ananassa HOM05D006342 ORTHO05D003187 6.0e-100 368.6 395 54.9
Hund06370 Selenicereus undatus HOM05D006342 ORTHO05D008155 8.7e-99 364.8 272 68.4
Zm00001eb006830 Zea mays HOM05D006342 ORTHO05D008155 1.3e-94 350.9 312 60.3
HPP92_019303 Vanilla planifolia HOM05D006342 ORTHO05D008155 3.8e-94 349.4 333 58.0
Mapoly0112s0045 Marchantia polymorpha HOM05D006342 ORTHO05D008155 8.4e-94 348.2 307 58.6
Oeu000253.3 Olea europaea HOM05D006342 ORTHO05D008155 1.4e-93 347.4 313 58.1
PSO210G1371 Papaver somniferum HOM05D006342 ORTHO05D008155 2.4e-93 346.7 254 69.3
Phvul.002G210750 Phaseolus vulgaris HOM05D006342 ORTHO05D008155 2.1e-92 343.6 308 61.4
Migut.B01157 Erythranthe guttata HOM05D006342 ORTHO05D008155 2.3e-91 340.1 306 58.2
Pp3c15_22700 Physcomitrium patens HOM05D006342 ORTHO05D008155 3.9e-91 339.3 302 57.0
SMO364G0259 Selaginella moellendorffii HOM05D006342 ORTHO05D008155 3.3e-90 336.3 284 62.0
Sed0004067 Sechium edule HOM05D006342 ORTHO05D008155 2.7e-84 316.6 322 56.2
QL11p022738 Quercus lobata HOM05D006342 ORTHO05D008155 2.5e-82 310.1 230 71.7
SpUN0430_0010 Schrenkiella parvula HOM05D006342 ORTHO05D008155 2.1e-81 307.0 228 69.7
Hma1.2p1_0522F.1_g171810 Hydrangea macrophylla HOM05D006342 ORTHO05D008155 1.4e-77 294.3 201 73.6
FAN14G1047 Fragaria x ananassa HOM05D000343 ORTHO05D003187 1.8e-75 287.3 303 53.5
Ah.01g010100 Amaranthus hybridus HOM05D006342 ORTHO05D008155 4.8e-73 279.3 212 65.6
Haze_10585 Corylus avellana HOM05D006342 ORTHO05D008155 1.8e-72 277.3 287 56.4
AagrBONN_evm.TU.Sc2ySwM_228.424 Anthoceros agrestis HOM05D006342 ORTHO05D008155 5.3e-72 275.8 326 48.5
AagrBONN_evm.TU.Sc2ySwM_117.3744 Anthoceros agrestis HOM05D006342 ORTHO05D008155 1.5e-66 257.7 300 48.0
CBR_g45392 Chara braunii HOM05D006342 ORTHO05D008155 2.0e-63 247.3 276 49.3
PRCOL_00002739 Prasinoderma coloniale HOM05D006342 ORTHO05D008155 4.7e-60 236.1 300 45.7
SEGI_15165 Sequoiadendron giganteum HOM05D006342 ORTHO05D008155 7.4e-58 228.8 176 65.3
Cre04.g219787 Chlamydomonas reinhardtii HOM05D006342 ORTHO05D008155 9.7e-50 201.8 349 39.3
ATR0918G004 Amborella trichopoda HOM05D006342 ORTHO05D008155 1.3e-49 201.4 277 45.8
Aqoxy5G01924 Aquilegia oxysepala HOM05D006342 ORTHO05D008155 6.1e-44 182.6 127 71.7
Glyma.10G123801 Glycine max HOM05D006342 ORTHO05D008155 6.3e-33 146.0 104 71.2
Glyma.16G064700 Glycine max HOM05D006342 ORTHO05D008155 6.3e-33 146.0 104 71.2
ATR0782G112 Amborella trichopoda HOM05D006342 ORTHO05D008155 6.8e-27 125.9 93 65.6
arahy.Tifrunner.gnm1.ann1.6J847D Arachis hypogaea HOM05D006342 ORTHO05D008155 4.4e-26 123.2 97 70.1
arahy.Tifrunner.gnm1.ann1.RT43SE Arachis hypogaea HOM05D006342 ORTHO05D008155 4.4e-26 123.2 97 70.1
SEGI_15059 Sequoiadendron giganteum HOM05D006342 ORTHO05D008155 5.7e-26 122.9 107 61.7
arahy.Tifrunner.gnm1.ann1.2FS2S8 Arachis hypogaea HOM05D006342 ORTHO05D008155 3.7e-25 120.2 97 68.0
CARHR052370 Cardamine hirsuta HOM05D006342 ORTHO05D008155 5.9e-23 112.8 90 61.1
CSS0034348 Camellia sinensis var. sinensis HOM05D006342 ORTHO05D008155 4.4e-18 96.7 94 60.6
TAR376G0398 Trochodendron aralioides HOM05D000064 ORTHO05D001307 7.3e-13 79.3 56 69.6
arahy.Tifrunner.gnm1.ann1.P2KY5D Arachis hypogaea HOM05D006342 ORTHO05D008155 4.7e-12 76.6 79 57.0
Potri.001G311400 Populus trichocarpa HOM05D006342 ORTHO05D332779 2.3e-11 74.3 93 50.5
Eucgr.G00935 Eucalyptus grandis HOM05D006342 ORTHO05D008155 2.0e-10 71.2 120 38.3


User provided reference genes

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