Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.017G049500 Populus trichocarpa HOM05D004754 ORTHO05D005566 4.3e-43 177.6 88 100.0
Potri.017G048600 Populus trichocarpa HOM05D004754 ORTHO05D005566 1.9e-14 82.4 39 94.9
unitig_21.g20734 Utricularia gibba HOM05D004754 ORTHO05D005566 9.4e-14 80.1 38 89.5
Ah.02g113940 Amaranthus hybridus HOM05D004754 ORTHO05D005566 2.7e-13 78.6 52 65.4
AUR62001036 Chenopodium quinoa HOM05D004754 ORTHO05D005566 2.7e-13 78.6 38 86.8
EL10Ac5g11113 Beta vulgaris HOM05D004754 ORTHO05D005566 3.6e-13 78.2 38 86.8
Manes.10G102700 Manihot esculenta HOM05D004754 ORTHO05D005566 3.6e-13 78.2 39 92.3
Psat0s5166g0080 Pisum sativum HOM05D004754 ORTHO05D005566 3.6e-13 78.2 39 87.2
GSVIVG01027347001 Vitis vinifera HOM05D004754 ORTHO05D005566 3.6e-13 78.2 39 89.7
Atru.chr10.946 Acer truncatum HOM05D004754 ORTHO05D005566 6.1e-13 77.4 39 89.7
Atru.chr10.952 Acer truncatum HOM05D004754 ORTHO05D005566 7.9e-13 77.0 39 87.2
MSTRG.16715 Avicennia marina HOM05D004754 ORTHO05D005566 7.9e-13 77.0 39 84.6
Gohir.A08G179300 Gossypium hirsutum HOM05D004754 ORTHO05D005566 7.9e-13 77.0 39 89.7
Gohir.D08G197900 Gossypium hirsutum HOM05D004754 ORTHO05D005566 7.9e-13 77.0 39 89.7
Gorai.004G208700 Gossypium raimondii HOM05D004754 ORTHO05D005566 7.9e-13 77.0 39 89.7
CANSAT64G0220 Cannabis sativa HOM05D004754 ORTHO05D005566 1.0e-12 76.6 39 89.7
AUR62004920 Chenopodium quinoa HOM05D004754 ORTHO05D005566 1.0e-12 76.6 49 69.4
Duzib248G0043 Durio zibethinus HOM05D004754 ORTHO05D005566 1.4e-12 76.3 39 87.2
Potri.007G112300 Populus trichocarpa HOM05D004754 ORTHO05D005566 1.4e-12 76.3 39 87.2
Thecc.02G011000 Theobroma cacao HOM05D004754 ORTHO05D005566 1.4e-12 76.3 39 87.2
GSVIVG01021588001 Vitis vinifera HOM05D004754 ORTHO05D005566 1.4e-12 76.3 39 87.2
DCAR_005794 Daucus carota HOM05D004754 ORTHO05D005566 1.8e-12 75.9 39 87.2
Sabra07G0091800 Salix brachista HOM05D004754 ORTHO05D005566 1.8e-12 75.9 39 84.6
FvH4_2g14961 Fragaria vesca HOM05D004754 ORTHO05D005566 2.3e-12 75.5 39 89.7
FAN24G0458 Fragaria x ananassa HOM05D004754 ORTHO05D005566 2.3e-12 75.5 39 89.7
RcHm_v2.0_Chr5g0015381 Rosa chinensis HOM05D004754 ORTHO05D005566 2.3e-12 75.5 39 89.7
RcHm_v2.0_Chr5g0052721 Rosa chinensis HOM05D004754 ORTHO05D005566 2.3e-12 75.5 39 89.7
Sed0000755 Sechium edule HOM05D004754 ORTHO05D005566 2.3e-12 75.5 46 78.3
CSS0038452 Camellia sinensis var. sinensis HOM05D004754 ORTHO05D005566 3.0e-12 75.1 39 84.6
Lsat_1_v5_gn_9_95201 Lactuca sativa HOM05D004754 ORTHO05D005566 3.0e-12 75.1 39 84.6
QL05p054004 Quercus lobata HOM05D004754 ORTHO05D005566 3.0e-12 75.1 39 87.2
QL08p010099 Quercus lobata HOM05D004754 ORTHO05D005566 3.0e-12 75.1 39 87.2
CAN.G1231.9 Capsicum annuum HOM05D004754 ORTHO05D005566 3.9e-12 74.7 38 86.8
CAN.G3385.2 Capsicum annuum HOM05D004754 ORTHO05D005566 3.9e-12 74.7 38 86.8
Cc02_g19240 Coffea canephora HOM05D004754 ORTHO05D005566 3.9e-12 74.7 38 84.2
Lj1P1166T28 Lonicera japonica HOM05D004754 ORTHO05D005566 3.9e-12 74.7 39 84.6
vmacro03406 Vaccinium macrocarpon HOM05D004754 ORTHO05D005566 3.9e-12 74.7 39 87.2
AUR62008508 Chenopodium quinoa HOM05D004754 ORTHO05D005566 5.1e-12 74.3 39 79.5
MBI09_g11913_MAGBIO Magnolia biondii HOM05D004754 ORTHO05D005566 5.1e-12 74.3 39 84.6
MBI10_g08558_MAGBIO Magnolia biondii HOM05D004754 ORTHO05D005566 5.1e-12 74.3 39 84.6
MD17G1076300 Malus domestica HOM05D004754 ORTHO05D005566 5.1e-12 74.3 39 87.2
Manes.07G037300 Manihot esculenta HOM05D004754 ORTHO05D005566 5.1e-12 74.3 39 84.6
Prupe.1G099600 Prunus persica HOM05D004754 ORTHO05D005566 5.1e-12 74.3 39 87.2
CSS0007960 Camellia sinensis var. sinensis HOM05D004754 ORTHO05D005566 6.7e-12 73.9 39 82.1
Cpa.g.sc17.70 Carica papaya HOM05D004754 ORTHO05D005566 6.7e-12 73.9 39 82.1
Cfa020535 Carpinus fangiana HOM05D004754 ORTHO05D005566 6.7e-12 73.9 39 84.6
Lj2g0020778 Lotus japonicus HOM05D004754 ORTHO05D005566 6.7e-12 73.9 39 82.1
Lalb_Chr12g0204311 Lupinus albus HOM05D004754 ORTHO05D005566 6.7e-12 73.9 39 84.6
Ca_02551_v3 Cicer arietinum L. HOM05D004754 ORTHO05D005566 8.8e-12 73.6 39 82.1
Ca_14146_v3 Cicer arietinum L. HOM05D004754 ORTHO05D005566 8.8e-12 73.6 39 82.1
CsaV3_1G039230 Cucumis sativus L. HOM05D004754 ORTHO05D005566 8.8e-12 73.6 39 84.6
Dinv15895 Davidia involucrata HOM05D004754 ORTHO05D005566 8.8e-12 73.6 39 82.1
FAN15G1860 Fragaria x ananassa HOM05D004754 ORTHO05D005566 8.8e-12 73.6 39 87.2
Oeu010398.1 Olea europaea HOM05D004754 ORTHO05D005566 8.8e-12 73.6 39 82.1
Hma1.2p1_1418F.1_g282250 Hydrangea macrophylla HOM05D004754 ORTHO05D005566 1.1e-11 73.2 39 84.6
Oeu018596.1 Olea europaea HOM05D004754 ORTHO05D005566 1.1e-11 73.2 39 82.1
Phvul.009G217100 Phaseolus vulgaris HOM05D004754 ORTHO05D005566 1.1e-11 73.2 39 82.1
Hund19582 Selenicereus undatus HOM05D004754 ORTHO05D005566 1.1e-11 73.2 39 82.1
Sopen01g049820 Solanum pennellii HOM05D004754 ORTHO05D005566 1.1e-11 73.2 39 82.1
TPR.G33233 Trifolium pratense HOM05D004754 ORTHO05D005566 1.1e-11 73.2 39 82.1
VMungo1309G0019 Vigna mungo HOM05D004754 ORTHO05D005566 1.1e-11 73.2 39 82.1
Ciclev10015850m.g Citrus clementina HOM05D004754 ORTHO05D005566 1.5e-11 72.8 39 84.6
Glyma.14G055800 Glycine max HOM05D004754 ORTHO05D005566 1.5e-11 72.8 39 79.5
HanXRQChr12g0360561 Helianthus annuus HOM05D004754 ORTHO05D005566 1.5e-11 72.8 39 79.5
Nitab4.5_0005392g0050 Nicotiana tabacum HOM05D004754 ORTHO05D005566 1.5e-11 72.8 38 84.2
TWI53G1117 Tripterygium wilfordii HOM05D004754 ORTHO05D005566 1.5e-11 72.8 39 84.6
Nitab4.5_0002815g0050 Nicotiana tabacum HOM05D004754 ORTHO05D005566 2.0e-11 72.4 38 86.8
Prupe.3G237900 Prunus persica HOM05D004754 ORTHO05D005566 2.0e-11 72.4 39 84.6
Rhsim01G0266600 Rhododendron simsii HOM05D004754 ORTHO05D005566 2.0e-11 72.4 39 79.5
Rhsim13G0119600 Rhododendron simsii HOM05D004754 ORTHO05D005566 2.0e-11 72.4 38 84.2
Sc12g0003070 Simmondsia chinensis HOM05D004754 ORTHO05D005566 2.0e-11 72.4 39 82.1
Lsat_1_v5_gn_9_95240 Lactuca sativa HOM05D004754 ORTHO05D005566 2.5e-11 72.0 39 82.1
PSO210G1456 Papaver somniferum HOM05D004754 ORTHO05D005566 2.5e-11 72.0 39 87.2
PSO210G6921 Papaver somniferum HOM05D004754 ORTHO05D005566 2.5e-11 72.0 39 87.2
Psat5g233520 Pisum sativum HOM05D004754 ORTHO05D005566 2.5e-11 72.0 39 82.1
Glyma.02G261300 Glycine max HOM05D004754 ORTHO05D005566 3.3e-11 71.6 39 79.5
Gohir.D13G114400 Gossypium hirsutum HOM05D004754 ORTHO05D005566 3.3e-11 71.6 39 82.1
Gorai.013G128400 Gossypium raimondii HOM05D004754 ORTHO05D005566 3.3e-11 71.6 39 82.1
Dinv32196 Davidia involucrata HOM05D004754 ORTHO05D005566 4.3e-11 71.2 39 79.5
MD09G1087500 Malus domestica HOM05D004754 ORTHO05D005566 4.3e-11 71.2 39 84.6
Medtr0393s0030 Medicago truncatula HOM05D004754 ORTHO05D005566 4.3e-11 71.2 39 79.5
Medtr3g010310 Medicago truncatula HOM05D004754 ORTHO05D005566 4.3e-11 71.2 39 79.5
SalBow6G1352 Salvia bowleyana HOM05D004754 ORTHO05D005566 4.3e-11 71.2 38 78.9
SGA_v2.0_scaffold172G38987 Striga asiatica HOM05D004754 ORTHO05D005566 4.3e-11 71.2 39 84.6
TAR624G1057 Trochodendron aralioides HOM05D004754 ORTHO05D005566 4.3e-11 71.2 39 84.6
CiPaw.12G121800 Carya illinoinensis HOM05D004754 ORTHO05D005566 5.7e-11 70.9 39 79.5
AUR62021582 Chenopodium quinoa HOM05D004754 ORTHO05D005566 5.7e-11 70.9 39 74.4
COL.COLO4_17670 Corchorus olitorius HOM05D004754 ORTHO05D005566 5.7e-11 70.9 37 83.8
ECA240G2987 Erigeron canadensis HOM05D004754 ORTHO05D005566 5.7e-11 70.9 39 76.9
RcHm_v2.0_Chr5g0052651 Rosa chinensis HOM05D004754 ORTHO05D005566 5.7e-11 70.9 39 84.6
vmacro08577 Vaccinium macrocarpon HOM05D004754 ORTHO05D005566 5.7e-11 70.9 39 79.5
Aqoxy7G03057 Aquilegia oxysepala HOM05D004754 ORTHO05D005566 9.7e-11 70.1 38 78.9
Eucgr.K03201 Eucalyptus grandis HOM05D004754 ORTHO05D005566 9.7e-11 70.1 39 79.5
PSO675G6933 Papaver somniferum HOM05D004754 ORTHO05D005566 9.7e-11 70.1 39 87.2
TAR626G0708 Trochodendron aralioides HOM05D004754 ORTHO05D005566 9.7e-11 70.1 39 82.1
ClCG03G006380 Citrullus lanatus HOM05D004754 ORTHO05D005566 1.3e-10 69.7 39 76.9
BcaB01g01919 Brassica carinata HOM05D004754 ORTHO05D005566 1.7e-10 69.3 39 76.9
MELO3C015347.2 Cucumis melo HOM05D004754 ORTHO05D005566 2.2e-10 68.9 39 79.5
Migut.B00386 Erythranthe guttata HOM05D004754 ORTHO05D005566 2.8e-10 68.6 39 74.4
BolC9t53233H Brassica oleracea HOM05D004754 ORTHO05D005566 3.7e-10 68.2 39 76.9
CDE02G1350 Ceratophyllum demersum HOM05D004754 ORTHO05D005566 3.7e-10 68.2 47 63.8
THA.LOC104812357 Tarenaya hassleriana HOM05D004754 ORTHO05D005566 3.7e-10 68.2 38 78.9
A09p02940 Brassica napus HOM05D004754 ORTHO05D005566 4.8e-10 67.8 39 74.4
BraA09t35937Z Brassica rapa HOM05D004754 ORTHO05D005566 4.8e-10 67.8 39 74.4
CARHR252140 Cardamine hirsuta HOM05D004754 ORTHO05D005566 8.2e-10 67.0 38 73.7
AL6G49030 Arabidopsis lyrata HOM05D004754 ORTHO05D005566 1.4e-09 66.2 39 71.8
BcaC04g23945 Brassica carinata HOM05D004754 ORTHO05D005566 1.4e-09 66.2 39 74.4
C09p03030 Brassica napus HOM05D004754 ORTHO05D005566 1.4e-09 66.2 39 74.4
Eucgr.E02475 Eucalyptus grandis HOM05D004754 ORTHO05D005566 1.8e-09 65.9 39 69.2
Thhalv10028820m.g Eutrema salsugineum HOM05D004754 ORTHO05D005566 1.8e-09 65.9 38 73.7
ATR0584G072 Amborella trichopoda HOM05D004754 ORTHO05D005566 2.4e-09 65.5 39 71.8
Sp6g03640 Schrenkiella parvula HOM05D004754 ORTHO05D005566 4.1e-09 64.7 38 71.1
AT4G05440 Arabidopsis thaliana HOM05D004754 ORTHO05D005566 6.9e-09 63.9 39 66.7
Haze_09496 Corylus avellana HOM05D004754 ORTHO05D005566 9.1e-09 63.5 49 63.3
PGR031G3887 Punica granatum HOM05D004754 ORTHO05D005566 2.6e-08 62.0 39 74.4
Carub.0006s3335 Capsella rubella HOM05D004754 ORTHO05D005566 3.4e-08 61.6 38 71.1
Mapoly0049s0079 Marchantia polymorpha HOM05D004754 ORTHO05D005566 1.7e-07 59.3 39 66.7
SMO144G0026 Selaginella moellendorffii HOM05D004754 ORTHO05D005566 2.9e-07 58.5 39 66.7
Psat5g233560 Pisum sativum HOM05D004754 ORTHO05D005566 1.4e-06 56.2 39 66.7
HPP92_027352 Vanilla planifolia HOM05D004754 ORTHO05D005566 1.4e-06 56.2 39 56.4
Pp3c20_22950 Physcomitrium patens HOM05D004754 ORTHO05D005566 4.2e-06 54.7 39 61.5


User provided reference genes

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