Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.017G041300 Populus trichocarpa HOM05D005409 ORTHO05D006456 2.8e-308 1061.2 583 100.0
Sabra17G0028000 Salix brachista HOM05D005409 ORTHO05D006456 2.6e-253 878.6 664 72.6
Potri.007G119200 Populus trichocarpa HOM05D005409 ORTHO05D006456 9.6e-224 780.4 613 70.3
Sabra07G0096100 Salix brachista HOM05D005409 ORTHO05D006456 1.1e-211 740.3 726 59.6
TAR624G1144 Trochodendron aralioides HOM05D005409 ORTHO05D006456 1.2e-128 464.5 640 47.7
Nn1g06923 Nelumbo nucifera HOM05D005409 ORTHO05D006456 5.1e-124 449.1 641 47.6
GSVIVG01030650001 Vitis vinifera HOM05D005409 ORTHO05D006456 4.2e-118 429.5 610 46.1
TAR626G0140 Trochodendron aralioides HOM05D005409 ORTHO05D006456 1.7e-111 407.5 640 45.0
Dinv18952 Davidia involucrata HOM05D005409 ORTHO05D006456 6.3e-98 362.5 665 42.3
Aqoxy1G03830 Aquilegia oxysepala HOM05D005409 ORTHO05D006456 1.4e-97 361.3 676 42.3
Cfa016400 Carpinus fangiana HOM05D005409 ORTHO05D006456 2.6e-96 357.1 643 42.1
Ciclev10014614m.g Citrus clementina HOM05D005409 ORTHO05D006456 2.6e-96 357.1 639 41.8
QL05p077347 Quercus lobata HOM05D005409 ORTHO05D006456 2.2e-95 354.0 697 42.3
Prupe.4G030000 Prunus persica HOM05D005409 ORTHO05D006456 3.8e-95 353.2 641 41.5
MBI02_g26225_MAGBIO Magnolia biondii HOM05D005409 ORTHO05D006456 3.6e-93 346.7 626 45.5
CiPaw.10G113200 Carya illinoinensis HOM05D005409 ORTHO05D006456 3.3e-91 340.1 642 40.0
Thecc.06G207400 Theobroma cacao HOM05D005409 ORTHO05D006456 4.3e-91 339.7 654 43.0
FAN25G1204 Fragaria x ananassa HOM05D005409 ORTHO05D006456 4.8e-90 336.3 675 39.9
Atru.chr6.3116 Acer truncatum HOM05D005409 ORTHO05D006456 1.4e-89 334.7 440 48.4
Manes.17G030300 Manihot esculenta HOM05D005409 ORTHO05D006456 6.9e-89 332.4 645 41.7
Phvul.002G218900 Phaseolus vulgaris HOM05D005409 ORTHO05D006456 6.9e-89 332.4 644 40.8
Cc02_g11840 Coffea canephora HOM05D005409 ORTHO05D006456 5.9e-88 329.3 668 40.6
CiPaw.10G113100 Carya illinoinensis HOM05D005409 ORTHO05D006456 6.5e-87 325.9 640 40.9
Sed0006411 Sechium edule HOM05D005409 ORTHO05D006456 1.9e-86 324.3 625 43.0
Gohir.D10G017400 Gossypium hirsutum HOM05D005409 ORTHO05D006456 2.5e-86 323.9 635 40.6
Gorai.011G019300 Gossypium raimondii HOM05D005409 ORTHO05D006456 2.5e-86 323.9 635 40.6
Glyma.07G187300 Glycine max HOM05D005409 ORTHO05D006456 9.4e-86 322.0 645 39.8
Gohir.A10G017200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 1.2e-85 321.6 638 41.4
Duzib192G0995 Durio zibethinus HOM05D005409 ORTHO05D006456 2.1e-85 320.9 652 39.7
Sc17g0006920 Simmondsia chinensis HOM05D005409 ORTHO05D006456 5.1e-84 316.2 640 39.7
Gohir.D09G070300 Gossypium hirsutum HOM05D005409 ORTHO05D006456 1.1e-83 315.1 661 39.5
Lj4g0002185 Lotus japonicus HOM05D005409 ORTHO05D006456 2.0e-83 314.3 653 39.1
Hund23539 Selenicereus undatus HOM05D005409 ORTHO05D006456 4.4e-83 313.2 642 39.3
GSVIVG01006401001 Vitis vinifera HOM05D005409 ORTHO05D006456 9.7e-83 312.0 634 38.8
Gorai.006G084700 Gossypium raimondii HOM05D005409 ORTHO05D006456 1.3e-82 311.6 668 39.2
Hma1.2p1_0809F.1_g221770 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 1.3e-82 311.6 653 40.1
CsaV3_1G011380 Cucumis sativus L. HOM05D005409 ORTHO05D006456 3.7e-82 310.1 632 40.2
Nitab4.5_0000503g0080 Nicotiana tabacum HOM05D005409 ORTHO05D006456 4.8e-82 309.7 662 39.3
ClCG03G005190 Citrullus lanatus HOM05D005409 ORTHO05D006456 6.3e-82 309.3 631 40.4
MELO3C002515.2 Cucumis melo HOM05D005409 ORTHO05D006456 6.3e-82 309.3 631 41.5
Actinidia11830 Actinidia chinensis HOM05D005409 ORTHO05D006456 1.1e-81 308.5 666 37.7
Duzib235G0390 Durio zibethinus HOM05D005409 ORTHO05D006456 1.1e-81 308.5 664 40.5
Gohir.A09G070200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 1.8e-81 307.8 648 39.7
COL.COLO4_33645 Corchorus olitorius HOM05D005409 ORTHO05D006456 3.1e-81 307.0 654 41.7
VMungo0251G1750 Vigna mungo HOM05D005409 ORTHO05D006456 3.1e-81 307.0 655 38.9
PGSC0003DMG400021722 Solanum tuberosum HOM05D005409 ORTHO05D006456 9.1e-81 305.4 660 40.2
Glyma.08G061800 Glycine max HOM05D005409 ORTHO05D006456 3.4e-80 303.5 649 38.5
Nitab4.5_0006456g0010 Nicotiana tabacum HOM05D005409 ORTHO05D006456 4.5e-80 303.1 662 39.3
Solyc02g079880.3 Solanum lycopersicum HOM05D005409 ORTHO05D006456 4.5e-80 303.1 659 39.9
Peaxi162Scf00759g00211 Petunia axillaris HOM05D005409 ORTHO05D006456 7.7e-80 302.4 661 38.9
MD05G1335400 Malus domestica HOM05D005409 ORTHO05D006456 1.0e-79 302.0 632 38.8
MD10G1310800 Malus domestica HOM05D005409 ORTHO05D006456 2.2e-79 300.8 641 39.2
TWI63G1109 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 2.2e-79 300.8 663 40.0
Ca_18454_v3 Cicer arietinum L. HOM05D005409 ORTHO05D006456 2.9e-79 300.4 643 39.2
Lj2A276T57 Lonicera japonica HOM05D005409 ORTHO05D006456 2.9e-79 300.4 641 39.3
ECA236G3644 Erigeron canadensis HOM05D005409 ORTHO05D006456 3.8e-79 300.1 620 40.2
AUR62012574 Chenopodium quinoa HOM05D005409 ORTHO05D006456 2.5e-78 297.4 636 40.6
PSO541G2946 Papaver somniferum HOM05D005409 ORTHO05D006456 2.5e-78 297.4 633 41.7
Lj1A1221T57 Lonicera japonica HOM05D005409 ORTHO05D006456 3.2e-78 297.0 622 39.2
CANSAT35G0463 Cannabis sativa HOM05D005409 ORTHO05D006456 5.5e-78 296.2 636 37.9
MSTRG.15953 Avicennia marina HOM05D005409 ORTHO05D006456 9.4e-78 295.4 654 37.3
AUR62014626 Chenopodium quinoa HOM05D005409 ORTHO05D006456 3.6e-77 293.5 636 39.9
PSO675G2591 Papaver somniferum HOM05D005409 ORTHO05D006456 3.6e-77 293.5 633 41.2
Eucgr.E03596 Eucalyptus grandis HOM05D005409 ORTHO05D006456 6.1e-77 292.7 518 42.7
EL10As6g23684 Beta vulgaris HOM05D005409 ORTHO05D006456 2.3e-76 290.8 646 40.2
HanXRQChr15g0482781 Helianthus annuus HOM05D005409 ORTHO05D006456 2.3e-76 290.8 628 39.2
Sopen02g024640 Solanum pennellii HOM05D005409 ORTHO05D006456 2.3e-76 290.8 662 39.3
Oeu016146.1 Olea europaea HOM05D005409 ORTHO05D006456 3.0e-76 290.4 654 36.9
HanXRQChr15g0482771 Helianthus annuus HOM05D005409 ORTHO05D006456 2.0e-75 287.7 629 38.5
TPR.G13934 Trifolium pratense HOM05D005409 ORTHO05D006456 3.3e-75 287.0 639 37.6
Lalb_Chr09g0327161 Lupinus albus HOM05D005409 ORTHO05D006456 4.4e-75 286.6 639 38.8
Hma1.2p1_0809F.1_g221760 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 2.8e-74 283.9 527 42.3
Medtr4g092050 Medicago truncatula HOM05D005409 ORTHO05D006456 2.8e-74 283.9 631 38.8
DCAR_008109 Daucus carota HOM05D005409 ORTHO05D006456 4.8e-74 283.1 631 38.4
Ah.14g088510 Amaranthus hybridus HOM05D005409 ORTHO05D006456 3.1e-73 280.4 640 38.3
CDE12G0800 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 5.3e-73 279.6 514 38.7
Lsat_1_v5_gn_7_18380 Lactuca sativa HOM05D005409 ORTHO05D006456 1.2e-72 278.5 612 38.7
Psat0s935g0040 Pisum sativum HOM05D005409 ORTHO05D006456 2.9e-71 273.9 636 38.4
Potri.011G031900 Populus trichocarpa HOM05D005409 ORTHO05D006456 1.1e-70 271.9 641 40.7
Migut.M01258 Erythranthe guttata HOM05D005409 ORTHO05D006456 1.9e-70 271.2 628 38.4
FvH4_3g03030 Fragaria vesca HOM05D005409 ORTHO05D006456 7.2e-70 269.2 493 41.2
CDE01G0308 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 6.1e-69 266.2 630 36.3
HPP92_000870 Vanilla planifolia HOM05D005409 ORTHO05D006456 8.0e-69 265.8 642 37.5
Oeu050809.4 Olea europaea HOM05D005409 ORTHO05D006456 4.0e-68 263.5 642 35.7
Rhsim02G0115600 Rhododendron simsii HOM05D005409 ORTHO05D006456 2.0e-67 261.2 703 35.3
CSS0017238 Camellia sinensis var. sinensis HOM05D005409 ORTHO05D006456 9.7e-67 258.8 605 40.5
Actinidia26959 Actinidia chinensis HOM05D005409 ORTHO05D006456 9.1e-65 252.3 453 42.4
Sabra11G0025100 Salix brachista HOM05D005409 ORTHO05D006456 9.1e-65 252.3 630 37.3
A06p08100 Brassica napus HOM05D005409 ORTHO05D006456 7.7e-64 249.2 627 36.0
PGR042G2399 Punica granatum HOM05D005409 ORTHO05D006456 2.9e-63 247.3 651 38.7
Aa31LG1G3270 Aethionema arabicum HOM05D005409 ORTHO05D006456 6.5e-63 246.1 617 36.3
THA.LOC104809524 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 3.2e-62 243.8 625 36.2
Haze_06671 Corylus avellana HOM05D005409 ORTHO05D006456 1.6e-61 241.5 433 41.6
Sp1g10100 Schrenkiella parvula HOM05D005409 ORTHO05D006456 3.6e-61 240.4 620 36.9
BraA06t24009Z Brassica rapa HOM05D005409 ORTHO05D006456 6.1e-61 239.6 608 35.4
Lalb_Chr16g0383301 Lupinus albus HOM05D005409 ORTHO05D006456 6.1e-61 239.6 645 36.6
vmacro15844 Vaccinium macrocarpon HOM05D005409 ORTHO05D006456 1.2e-59 235.3 663 35.1
BcaC05g25024 Brassica carinata HOM05D005409 ORTHO05D006456 2.0e-59 234.6 628 34.7
C05p09680 Brassica napus HOM05D005409 ORTHO05D006456 5.7e-59 233.0 628 34.7
THA.LOC104818924 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 1.3e-58 231.9 564 35.6
Sabra11G0019200 Salix brachista HOM05D005409 ORTHO05D006456 6.3e-58 229.6 632 36.2
BolC5t29709H Brassica oleracea HOM05D005409 ORTHO05D006456 1.8e-57 228.0 603 34.5
Cpa.g.sc81.2 Carica papaya HOM05D005409 ORTHO05D006456 1.8e-57 228.0 443 41.5
DCAR_004174 Daucus carota HOM05D005409 ORTHO05D006456 4.1e-57 226.9 611 34.7
TWI38G0167 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 4.1e-57 226.9 600 38.7
AT1G11480 Arabidopsis thaliana HOM05D005409 ORTHO05D006456 5.4e-57 226.5 638 35.4
Carub.0001s1109 Capsella rubella HOM05D005409 ORTHO05D006456 1.6e-56 224.9 600 37.2
Thhalv10007161m.g Eutrema salsugineum HOM05D005409 ORTHO05D006456 2.7e-56 224.2 628 35.4
CARHR011750 Cardamine hirsuta HOM05D005409 ORTHO05D006456 2.2e-55 221.1 637 35.8
arahy.Tifrunner.gnm1.ann1.XK38U2 Arachis hypogaea HOM05D005409 ORTHO05D006456 3.8e-55 220.3 616 35.9
AL1G22590 Arabidopsis lyrata HOM05D005409 ORTHO05D006456 1.1e-54 218.8 634 35.2
Actinidia26760 Actinidia chinensis HOM05D005409 ORTHO05D006456 4.7e-53 213.4 557 34.8
SalBow8G4343 Salvia bowleyana HOM05D005409 ORTHO05D006456 6.8e-52 209.5 469 37.5
Actinidia24044 Actinidia chinensis HOM05D005409 ORTHO05D006456 7.5e-51 206.1 516 36.8
Os07g0546100 Oryza sativa ssp. japonica HOM05D005409 ORTHO05D006456 7.5e-51 206.1 603 34.5
SGA_v2.0_scaffold7G03896 Striga asiatica HOM05D005409 ORTHO05D006456 2.8e-50 204.1 661 32.2
arahy.Tifrunner.gnm1.ann1.QZ9QK3 Arachis hypogaea HOM05D005409 ORTHO05D006456 5.4e-49 199.9 653 33.4
Oeu050499.1 Olea europaea HOM05D005409 ORTHO05D006456 4.5e-48 196.8 430 37.7
RcHm_v2.0_Chr5g0004681 Rosa chinensis HOM05D005409 ORTHO05D006456 5.9e-48 196.4 476 36.1
BcaNung07116 Brassica carinata HOM05D005409 ORTHO05D006456 1.7e-47 194.9 408 38.7
Zm00001eb323520 Zea mays HOM05D005409 ORTHO05D006456 1.5e-46 191.8 611 33.1
ATR0804G077 Amborella trichopoda HOM05D005409 ORTHO05D006456 2.5e-46 191.0 731 35.3
Ah.09g237100 Amaranthus hybridus HOM05D000067 ORTHO05D006456 1.9e-38 164.9 571 31.2
GSVIVG01006635001 Vitis vinifera HOM05D005409 ORTHO05D006456 6.8e-36 156.4 154 57.8
Atru.chr10.2048 Acer truncatum HOM05D005409 ORTHO05D006456 9.8e-35 152.5 369 37.7
Zm00001eb106500 Zea mays HOM05D005409 ORTHO05D006456 4.0e-28 130.6 396 32.6
RcHm_v2.0_Chr5g0004671 Rosa chinensis HOM05D005409 ORTHO05D006456 8.9e-28 129.4 144 54.2
Atru.chr10.2047 Acer truncatum HOM05D005409 ORTHO05D006456 2.0e-27 128.3 212 44.3
Atru.chr6.3115 Acer truncatum HOM05D005409 ORTHO05D006456 1.6e-24 118.6 190 43.2
SMO118G0050 Selaginella moellendorffii HOM05D005409 ORTHO05D006456 1.2e-19 102.4 730 25.3
Mapoly0113s0049 Marchantia polymorpha HOM05D005409 ORTHO05D006456 2.4e-17 94.7 104 55.8
AagrBONN_evm.TU.Sc2ySwM_228.455 Anthoceros agrestis HOM05D005409 ORTHO05D006456 6.6e-15 86.7 136 44.9
Cpa.g.sc81.1 Carica papaya HOM05D005409 ORTHO05D006456 1.5e-14 85.5 183 36.1
Pp3c20_3440 Physcomitrium patens HOM05D005409 ORTHO05D006456 1.6e-13 82.0 327 29.1
CBR_g36658 Chara braunii HOM05D005409 ORTHO05D006456 2.2e-10 71.6 112 42.0
Haze_06667 Corylus avellana HOM05D005409 ORTHO05D006456 1.7e-07 62.0 190 32.1


User provided reference genes

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