Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.017G030200 Populus trichocarpa HOM05D007749 ORTHO05D009809 4.5e-65 251.1 128 100.0
Sabra07G0104500 Salix brachista HOM05D007749 ORTHO05D009809 3.3e-52 208.4 125 87.2
Potri.007G128100 Populus trichocarpa HOM05D007749 ORTHO05D009809 5.7e-52 207.6 128 87.5
Manes.11G120200 Manihot esculenta HOM05D007749 ORTHO05D009809 1.5e-44 183.0 127 76.4
CsaV3_6G003910 Cucumis sativus L. HOM05D007749 ORTHO05D009809 1.4e-39 166.4 121 75.2
ClCG08G004660 Citrullus lanatus HOM05D007749 ORTHO05D009809 2.5e-39 165.6 121 73.6
MELO3C011656.2 Cucumis melo HOM05D007749 ORTHO05D009809 2.1e-38 162.5 122 73.8
Sed0008576 Sechium edule HOM05D007749 ORTHO05D009809 6.7e-37 157.5 123 69.9
TAR633G0982 Trochodendron aralioides HOM05D007749 ORTHO05D009809 2.0e-36 156.0 123 68.3
Atru.chr3.1496 Acer truncatum HOM05D007749 ORTHO05D009809 3.3e-36 155.2 126 66.7
Thecc.04G180100 Theobroma cacao HOM05D007749 ORTHO05D009809 7.4e-36 154.1 122 65.6
COL.COLO4_07660 Corchorus olitorius HOM05D007749 ORTHO05D009809 9.7e-36 153.7 123 68.3
Dinv44193 Davidia involucrata HOM05D006659 ORTHO05D008372 9.7e-36 153.7 120 70.0
Sp4g25410 Schrenkiella parvula HOM05D007749 ORTHO05D009809 9.7e-36 153.7 125 66.4
AUR62000855 Chenopodium quinoa HOM05D007749 ORTHO05D009809 1.7e-35 152.9 118 68.6
CANSAT56G0324 Cannabis sativa HOM05D007749 ORTHO05D009809 2.2e-35 152.5 121 66.9
CANSAT56G2176 Cannabis sativa HOM05D007749 ORTHO05D009809 2.2e-35 152.5 121 66.9
Thhalv10001764m.g Eutrema salsugineum HOM05D007749 ORTHO05D009809 2.2e-35 152.5 125 66.4
MD04G1040200 Malus domestica HOM05D007749 ORTHO05D009809 2.2e-35 152.5 124 65.3
THA.LOC104803661 Tarenaya hassleriana HOM05D007749 ORTHO05D009809 2.2e-35 152.5 125 65.6
Duzib151G1147 Durio zibethinus HOM05D007749 ORTHO05D009809 3.7e-35 151.8 121 68.6
AUR62005121 Chenopodium quinoa HOM05D007749 ORTHO05D009809 4.8e-35 151.4 118 67.8
CARHR138400 Cardamine hirsuta HOM05D007749 ORTHO05D009809 6.3e-35 151.0 123 65.9
Eucgr.H00373 Eucalyptus grandis HOM05D007749 ORTHO05D009809 6.3e-35 151.0 128 64.8
Aa31LG1G25110 Aethionema arabicum HOM05D007749 ORTHO05D009809 1.4e-34 149.8 123 65.9
Gorai.011G143100 Gossypium raimondii HOM05D007749 ORTHO05D009809 2.4e-34 149.1 125 64.0
Lsat_1_v5_gn_5_23460 Lactuca sativa HOM05D007749 ORTHO05D009809 2.4e-34 149.1 122 64.8
Lalb_Chr14g0372461 Lupinus albus HOM05D007749 ORTHO05D009809 2.4e-34 149.1 120 65.8
BcaB06g29301 Brassica carinata HOM05D007749 ORTHO05D009809 3.1e-34 148.7 123 65.9
C04p70340 Brassica napus HOM05D007749 ORTHO05D009809 3.1e-34 148.7 123 65.9
BolC4t28537H Brassica oleracea HOM05D007749 ORTHO05D009809 3.1e-34 148.7 123 65.9
BcaC02g07190 Brassica carinata HOM05D007749 ORTHO05D009809 6.9e-34 147.5 123 65.0
A04p32650 Brassica napus HOM05D007749 ORTHO05D009809 6.9e-34 147.5 123 65.0
BraA04t18728Z Brassica rapa HOM05D007749 ORTHO05D009809 6.9e-34 147.5 123 65.0
Gohir.D10G129800 Gossypium hirsutum HOM05D007749 ORTHO05D009809 6.9e-34 147.5 125 63.2
TWI15G0305 Tripterygium wilfordii HOM05D007749 ORTHO05D009809 6.9e-34 147.5 130 59.2
TWI15G0741 Tripterygium wilfordii HOM05D007749 ORTHO05D009809 6.9e-34 147.5 130 59.2
AT2G43310 Arabidopsis thaliana HOM05D007749 ORTHO05D009809 1.5e-33 146.4 123 65.9
Gohir.A10G136900 Gossypium hirsutum HOM05D007749 ORTHO05D009809 1.5e-33 146.4 124 63.7
PGR142G0736 Punica granatum HOM05D007749 ORTHO05D009809 5.9e-33 144.4 124 65.3
Rhsim09G0028100 Rhododendron simsii HOM05D007749 ORTHO05D009809 7.7e-33 144.1 117 66.7
AL4G41990 Arabidopsis lyrata HOM05D007749 ORTHO05D009809 1.3e-32 143.3 124 62.1
Carub.0004s2577 Capsella rubella HOM05D007749 ORTHO05D009809 1.7e-32 142.9 128 63.3
Medtr2g098870 Medicago truncatula HOM05D007749 ORTHO05D009809 1.7e-32 142.9 120 65.8
Lj3g0008958 Lotus japonicus HOM05D007749 ORTHO05D009809 5.0e-32 141.4 122 63.1
QL10p048728 Quercus lobata HOM05D007749 ORTHO05D009809 8.5e-32 140.6 120 64.2
GSVIVG01010752001 Vitis vinifera HOM05D007749 ORTHO05D009809 8.5e-32 140.6 115 64.3
Psat1g007040 Pisum sativum HOM05D007749 ORTHO05D009809 1.1e-31 140.2 117 64.1
Oeu037445.1 Olea europaea HOM05D007749 ORTHO05D009809 1.4e-31 139.8 121 62.8
Glyma.13G344000 Glycine max HOM05D007749 ORTHO05D009809 4.2e-31 138.3 118 62.7
CDE04G2919 Ceratophyllum demersum HOM05D007749 ORTHO05D009809 1.2e-30 136.7 120 61.7
CiPaw.02G055000 Carya illinoinensis HOM05D007749 ORTHO05D009809 3.6e-30 135.2 121 58.7
Phvul.005G152700 Phaseolus vulgaris HOM05D007749 ORTHO05D009809 4.7e-30 134.8 116 64.7
CDE07G1555 Ceratophyllum demersum HOM05D007749 ORTHO05D009809 6.1e-30 134.4 120 60.8
VMungo1080G1081 Vigna mungo HOM05D007749 ORTHO05D009809 1.0e-29 133.7 114 64.9
DCAR_008501 Daucus carota HOM05D007749 ORTHO05D009809 1.8e-29 132.9 124 57.3
ECA246G4014 Erigeron canadensis HOM05D007749 ORTHO05D009809 1.8e-29 132.9 120 61.7
PGSC0003DMG400020513 Solanum tuberosum HOM05D007749 ORTHO05D009809 3.0e-29 132.1 117 62.4
SGA_v2.0_scaffold52G19242 Striga asiatica HOM05D007749 ORTHO05D009809 1.5e-28 129.8 120 60.8
Sopen08g003040 Solanum pennellii HOM05D007749 ORTHO05D009809 2.0e-28 129.4 117 60.7
CAN.G845.29 Capsicum annuum HOM05D007749 ORTHO05D009809 2.6e-28 129.0 123 59.3
Nitab4.5_0005487g0020 Nicotiana tabacum HOM05D002689 ORTHO05D003129 2.6e-28 129.0 119 59.7
SalBow7G2644 Salvia bowleyana HOM05D007749 ORTHO05D009809 2.6e-28 129.0 127 56.7
Migut.B01511 Erythranthe guttata HOM05D007749 ORTHO05D009809 5.7e-28 127.9 121 59.5
FvH4_4g10741 Fragaria vesca HOM05D007749 ORTHO05D009809 7.4e-28 127.5 117 61.5
HanXRQChr02g0051151 Helianthus annuus HOM05D007749 ORTHO05D009809 7.4e-28 127.5 122 57.4
unitig_61.g26426 Utricularia gibba HOM05D007749 ORTHO05D009809 4.8e-27 124.8 117 57.3
Aqoxy7G01786 Aquilegia oxysepala HOM05D007749 ORTHO05D009809 2.4e-26 122.5 118 59.3
Cc00_g14450 Coffea canephora HOM05D007749 ORTHO05D009809 3.1e-26 122.1 119 58.0
Aqoxy7G01782 Aquilegia oxysepala HOM05D007749 ORTHO05D009809 9.1e-26 120.6 118 58.5
Ciclev10022681m.g Citrus clementina HOM05D007749 ORTHO05D009809 7.7e-25 117.5 123 53.7
MD07G1093600 Malus domestica HOM05D007749 ORTHO05D009809 7.7e-25 117.5 107 61.7
Glyma.15G030300 Glycine max HOM05D007749 ORTHO05D009809 1.0e-24 117.1 107 59.8
BcaB06g29300 Brassica carinata HOM05D007749 ORTHO05D009809 8.5e-24 114.0 98 65.3
MD07G1010900 Malus domestica HOM05D007749 ORTHO05D009809 1.1e-23 113.6 105 60.0
Sc25g0002390 Simmondsia chinensis HOM05D007749 ORTHO05D009809 4.2e-23 111.7 95 63.2
Prupe.1G192700 Prunus persica HOM05D007749 ORTHO05D009809 7.2e-23 110.9 105 61.0
Ca_01260_v3 Cicer arietinum L. HOM05D007749 ORTHO05D009809 2.3e-21 105.9 94 60.6
HPP92_012796 Vanilla planifolia HOM05D007749 ORTHO05D009809 1.5e-20 103.2 118 52.5
ATR0824G043 Amborella trichopoda HOM05D007749 ORTHO05D009809 2.0e-20 102.8 112 49.1
QL02p093050 Quercus lobata HOM05D000759 ORTHO05D000574 1.3e-19 100.1 108 54.6
Sc04g0006060 Simmondsia chinensis HOM05D007749 ORTHO05D009809 1.8e-18 96.3 97 56.7
PGSC0003DMG400020496 Solanum tuberosum HOM05D007749 ORTHO05D009809 2.4e-18 95.9 91 59.3
Actinidia35976 Actinidia chinensis HOM05D007749 ORTHO05D009809 9.1e-18 94.0 117 47.0
Prupe.1G193800 Prunus persica HOM05D007749 ORTHO05D009809 9.1e-18 94.0 92 55.4
Actinidia34603 Actinidia chinensis HOM05D007749 ORTHO05D009809 3.5e-17 92.0 119 47.9
QL04p015298 Quercus lobata HOM05D007749 ORTHO05D009809 1.9e-15 86.3 97 52.6
HPP92_012728 Vanilla planifolia HOM05D007749 ORTHO05D009809 1.2e-14 83.6 117 45.3
Nitab4.5_0010461g0010 Nicotiana tabacum HOM05D002689 ORTHO05D003129 2.6e-12 75.9 79 53.2
SEGI_37948 Sequoiadendron giganteum HOM05D007749 ORTHO05D009809 8.3e-11 70.9 115 34.8


User provided reference genes

Program Settings