Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.017G030100 Populus trichocarpa HOM05D006659 ORTHO05D008372 7.8e-159 563.9 322 100.0
Potri.007G128200 Populus trichocarpa HOM05D006659 ORTHO05D008372 7.7e-106 387.9 265 84.5
Sabra17G0019600 Salix brachista HOM05D006659 ORTHO05D008372 7.7e-106 387.9 266 82.7
Sabra07G0104600 Salix brachista HOM05D006659 ORTHO05D008372 1.8e-91 340.1 260 78.8
Manes.11G120400 Manihot esculenta HOM05D006659 ORTHO05D008372 2.1e-87 326.6 277 71.5
CSS0040017 Camellia sinensis var. sinensis HOM05D006659 ORTHO05D008372 6.5e-81 305.1 275 65.5
CSS0046315 Camellia sinensis var. sinensis HOM05D006659 ORTHO05D008372 6.5e-81 305.1 275 68.7
TPR.G34236 Trifolium pratense HOM05D006659 ORTHO05D008372 8.5e-81 304.7 272 61.4
Medtr4g067150 Medicago truncatula HOM05D006659 ORTHO05D008372 3.2e-80 302.8 271 64.2
CiPaw.01G100500 Carya illinoinensis HOM05D006659 ORTHO05D008372 1.2e-79 300.8 281 60.5
Duzib151G0383 Durio zibethinus HOM05D006659 ORTHO05D008372 1.4e-78 297.4 271 67.9
QL10p048762 Quercus lobata HOM05D006659 ORTHO05D008372 1.8e-78 297.0 273 61.5
RcHm_v2.0_Chr4g0406801 Rosa chinensis HOM05D006659 ORTHO05D008372 4.4e-77 292.4 202 74.8
Prupe.1G193000 Prunus persica HOM05D006659 ORTHO05D008372 4.9e-76 288.9 275 64.0
Psat7g214800 Pisum sativum HOM05D006659 ORTHO05D008372 1.1e-75 287.7 271 67.5
Duzib212G0569 Durio zibethinus HOM05D006659 ORTHO05D008372 7.0e-75 285.0 269 68.8
Ca_20785_v3 Cicer arietinum L. HOM05D006659 ORTHO05D008372 9.2e-75 284.6 270 69.6
Gohir.A09G211000 Gossypium hirsutum HOM05D006659 ORTHO05D008372 2.7e-74 283.1 269 67.7
Gohir.D09G204400 Gossypium hirsutum HOM05D006659 ORTHO05D008372 5.9e-74 282.0 273 68.9
Thecc.04G179900 Theobroma cacao HOM05D006659 ORTHO05D008372 7.7e-74 281.6 190 74.2
Haze_01513 Corylus avellana HOM05D006659 ORTHO05D008372 1.0e-73 281.2 287 55.7
Lalb_Chr03g0026131 Lupinus albus HOM05D006659 ORTHO05D008372 1.0e-73 281.2 270 58.5
Cpa.g.sc9.272 Carica papaya HOM05D006659 ORTHO05D008372 1.3e-73 280.8 192 73.4
Dinv44193 Davidia involucrata HOM05D006659 ORTHO05D008372 1.3e-73 280.8 184 76.6
Gorai.006G228300 Gossypium raimondii HOM05D006659 ORTHO05D008372 1.3e-73 280.8 269 71.0
Glyma.12G052500 Glycine max HOM05D006659 ORTHO05D008372 2.9e-73 279.6 280 56.1
TAR362G1327 Trochodendron aralioides HOM05D006659 ORTHO05D008372 3.8e-73 279.3 271 66.1
Lalb_Chr01g0003161 Lupinus albus HOM05D006659 ORTHO05D008372 5.0e-73 278.9 267 62.5
FvH4_4g10790 Fragaria vesca HOM05D006659 ORTHO05D008372 1.9e-72 276.9 204 70.6
FAN12G1956 Fragaria x ananassa HOM05D006659 ORTHO05D008372 1.9e-72 276.9 204 70.6
Gohir.A10G137100 Gossypium hirsutum HOM05D006659 ORTHO05D008372 1.9e-72 276.9 190 72.1
Gohir.D10G129500 Gossypium hirsutum HOM05D006659 ORTHO05D008372 1.9e-72 276.9 190 72.1
Gorai.011G142800 Gossypium raimondii HOM05D006659 ORTHO05D008372 1.9e-72 276.9 190 72.1
GSVIVG01010754001 Vitis vinifera HOM05D006659 ORTHO05D008372 1.9e-72 276.9 191 73.8
Lj3g0013401 Lotus japonicus HOM05D006659 ORTHO05D008372 3.3e-72 276.2 276 60.1
arahy.Tifrunner.gnm1.ann1.AVW0M7 Arachis hypogaea HOM05D006659 ORTHO05D008372 1.2e-71 274.2 271 56.5
MD04G1040300 Malus domestica HOM05D006659 ORTHO05D008372 2.1e-71 273.5 273 57.9
VMungo1127G1494 Vigna mungo HOM05D006659 ORTHO05D008372 1.0e-70 271.2 193 71.5
COL.COLO4_07662 Corchorus olitorius HOM05D006659 ORTHO05D008372 2.3e-70 270.0 185 74.1
Manes.04G042918 Manihot esculenta HOM05D006659 ORTHO05D008372 2.3e-70 270.0 274 67.9
Cc03_g13110 Coffea canephora HOM05D006659 ORTHO05D008372 3.0e-70 269.6 197 69.0
arahy.Tifrunner.gnm1.ann1.Q6M2DC Arachis hypogaea HOM05D006659 ORTHO05D008372 6.8e-70 268.5 274 55.5
MSTRG.24582 Avicennia marina HOM05D006659 ORTHO05D008372 1.5e-69 267.3 270 54.4
FAN07G0020 Fragaria x ananassa HOM05D006659 ORTHO05D008372 2.0e-69 266.9 204 69.1
Phvul.011G054500 Phaseolus vulgaris HOM05D006659 ORTHO05D008372 5.7e-69 265.4 192 69.3
Lj6C54T1 Lonicera japonica HOM05D006659 ORTHO05D008372 1.3e-68 264.2 190 72.1
Oeu053837.1 Olea europaea HOM05D006659 ORTHO05D008372 1.7e-68 263.8 279 58.4
PGR083G0301 Punica granatum HOM05D006659 ORTHO05D008372 8.3e-68 261.5 276 65.2
Actinidia35977 Actinidia chinensis HOM05D006659 ORTHO05D008372 1.8e-67 260.4 257 65.4
MBI08_g14954_MAGBIO Magnolia biondii HOM05D006659 ORTHO05D008064 2.4e-67 260.0 190 70.0
TWI14G0225 Tripterygium wilfordii HOM05D006659 ORTHO05D008372 2.4e-67 260.0 271 63.1
TWI39G0181 Tripterygium wilfordii HOM05D006659 ORTHO05D008372 2.4e-67 260.0 271 63.1
ClCG08G004640 Citrullus lanatus HOM05D006659 ORTHO05D008372 1.2e-66 257.7 272 59.2
THA.LOC104802307 Tarenaya hassleriana HOM05D006659 ORTHO05D008372 1.2e-66 257.7 194 67.0
Ciclev10021505m.g Citrus clementina HOM05D006659 ORTHO05D008372 1.6e-66 257.3 298 63.1
Dinv22730 Davidia involucrata HOM05D006659 ORTHO05D008372 1.6e-66 257.3 177 72.3
HanXRQChr01g0004971 Helianthus annuus HOM05D006659 ORTHO05D008372 3.5e-66 256.1 192 68.8
Rhsim09G0027800 Rhododendron simsii HOM05D006659 ORTHO05D008372 3.5e-66 256.1 196 65.3
Atru.chr3.1492 Acer truncatum HOM05D006659 ORTHO05D008372 4.6e-66 255.8 283 58.0
MELO3C011657.2 Cucumis melo HOM05D006659 ORTHO05D008372 5.9e-66 255.4 192 66.7
Lsat_1_v5_gn_1_120661 Lactuca sativa HOM05D006659 ORTHO05D008372 1.7e-65 253.8 193 68.4
THA.LOC104803695 Tarenaya hassleriana HOM05D006659 ORTHO05D008372 2.3e-65 253.4 193 66.8
RhsimUnG0221100 Rhododendron simsii HOM05D006659 ORTHO05D008372 3.0e-65 253.1 196 64.8
Aqoxy2G04093 Aquilegia oxysepala HOM05D006659 ORTHO05D008372 6.6e-65 251.9 271 57.2
Sopen06g029650 Solanum pennellii HOM05D006659 ORTHO05D008372 6.6e-65 251.9 199 66.8
Cfa015167 Carpinus fangiana HOM05D006659 ORTHO05D008372 8.6e-65 251.5 181 69.6
Solyc06g073290.1 Solanum lycopersicum HOM05D006659 ORTHO05D008372 1.9e-64 250.4 199 66.3
Migut.N03108 Erythranthe guttata HOM05D006659 ORTHO05D008372 2.5e-64 250.0 191 66.5
PGSC0003DMG400027013 Solanum tuberosum HOM05D006659 ORTHO05D008372 3.3e-64 249.6 286 55.6
PSO675G8713 Papaver somniferum HOM05D006659 ORTHO05D008372 5.6e-64 248.8 188 66.5
Nitab4.5_0008969g0010 Nicotiana tabacum HOM05D006659 ORTHO05D008372 7.3e-64 248.4 233 61.4
PSO017G5731 Papaver somniferum HOM05D006659 ORTHO05D008372 9.5e-64 248.1 188 66.5
CAN.G65.172 Capsicum annuum HOM05D006659 ORTHO05D008372 2.8e-63 246.5 202 67.3
ATR0824G177 Amborella trichopoda HOM05D006659 ORTHO05D008372 4.7e-63 245.7 193 63.2
CsaV3_6G003920 Cucumis sativus L. HOM05D006659 ORTHO05D008372 1.4e-62 244.2 273 61.2
unitig_578.g16263 Utricularia gibba HOM05D006659 ORTHO05D008372 8.9e-62 241.5 191 63.9
ECA248G3871 Erigeron canadensis HOM05D006659 ORTHO05D008372 1.5e-61 240.7 193 65.8
Aa31LG10G13750 Aethionema arabicum HOM05D006659 ORTHO05D008372 2.0e-61 240.4 189 66.1
A07p24640 Brassica napus HOM05D006659 ORTHO05D008372 2.6e-61 240.0 189 65.6
AL5G41300 Arabidopsis lyrata HOM05D006659 ORTHO05D008372 4.4e-61 239.2 188 63.8
CANSAT78G0008 Cannabis sativa HOM05D006659 ORTHO05D008372 4.4e-61 239.2 274 63.9
Ah.07g201990 Amaranthus hybridus HOM05D006659 ORTHO05D008372 5.8e-61 238.8 200 62.5
BcaB02g07470 Brassica carinata HOM05D006659 ORTHO05D008372 5.8e-61 238.8 271 56.1
BcaC07g40458 Brassica carinata HOM05D006659 ORTHO05D008372 5.8e-61 238.8 272 54.0
BraA07t30109Z Brassica rapa HOM05D006659 ORTHO05D008372 9.8e-61 238.0 190 64.7
A09p51640 Brassica napus HOM05D006659 ORTHO05D008372 1.3e-60 237.7 188 65.4
Sed0004224 Sechium edule HOM05D006659 ORTHO05D008372 1.3e-60 237.7 271 58.3
AT3G59400 Arabidopsis thaliana HOM05D006659 ORTHO05D008372 1.7e-60 237.3 188 63.3
BcaC07g40279 Brassica carinata HOM05D006659 ORTHO05D008372 2.9e-60 236.5 257 57.2
C08p34410 Brassica napus HOM05D006659 ORTHO05D008372 2.9e-60 236.5 257 57.2
BolC6t37777H Brassica oleracea HOM05D006659 ORTHO05D008372 2.9e-60 236.5 188 65.4
BolC8t51042H Brassica oleracea HOM05D006659 ORTHO05D008372 2.9e-60 236.5 257 57.2
BraA09t40604Z Brassica rapa HOM05D006659 ORTHO05D008372 2.9e-60 236.5 188 64.4
BcaC08g44982 Brassica carinata HOM05D006659 ORTHO05D008372 3.7e-60 236.1 188 64.9
C06p26120 Brassica napus HOM05D006659 ORTHO05D008372 4.9e-60 235.7 188 65.4
Carub.0005s2614 Capsella rubella HOM05D006659 ORTHO05D008372 4.9e-60 235.7 188 62.2
Zm00001eb406810 Zea mays HOM05D006659 ORTHO05D008372 1.4e-59 234.2 191 61.8
EL10Ac3g05931 Beta vulgaris HOM05D006659 ORTHO05D008372 1.9e-59 233.8 206 62.1
Os11g0267000 Oryza sativa ssp. japonica HOM05D006659 ORTHO05D008372 1.2e-58 231.1 276 60.1
Sed0027988 Sechium edule HOM05D006659 ORTHO05D008372 1.2e-58 231.1 191 62.8
CARHR169790 Cardamine hirsuta HOM05D006659 ORTHO05D008372 1.6e-58 230.7 189 64.6
Sp5g03740 Schrenkiella parvula HOM05D006659 ORTHO05D008372 3.5e-58 229.6 188 64.9
Thhalv10006183m.g Eutrema salsugineum HOM05D006659 ORTHO05D008372 1.3e-57 227.6 188 63.3
Glyma.11G127800 Glycine max HOM05D006659 ORTHO05D008372 3.9e-57 226.1 231 55.0
SalBow6G0037 Salvia bowleyana HOM05D006659 ORTHO05D008372 5.6e-56 222.2 270 56.3
AUR62015391 Chenopodium quinoa HOM05D006283 ORTHO05D007727 6.2e-55 218.8 214 56.1
SGA_v2.0_scaffold31G12575 Striga asiatica HOM05D006659 ORTHO05D008372 1.3e-52 211.1 157 67.5
SEGI_36451 Sequoiadendron giganteum HOM05D006659 ORTHO05D008372 1.1e-48 198.0 150 63.3
VMungo1309G1939 Vigna mungo HOM05D006659 ORTHO05D008372 2.4e-43 180.3 252 45.6
AagrBONN_evm.TU.Sc2ySwM_228.5135 Anthoceros agrestis HOM05D006659 ORTHO05D008372 9.2e-43 178.3 172 54.1
Pp3c6_11210 Physcomitrium patens HOM05D006659 ORTHO05D008372 3.0e-41 173.3 148 58.8
CDE04G1206 Ceratophyllum demersum HOM05D006659 ORTHO05D008372 5.6e-40 169.1 143 58.7
Pp3c25_4400 Physcomitrium patens HOM05D006659 ORTHO05D008372 5.6e-40 169.1 148 56.8
Peaxi162Scf00413g00827 Petunia axillaris HOM05D006659 ORTHO05D008372 1.6e-39 167.5 195 52.3
SMO170G0079 Selaginella moellendorffii HOM05D006659 ORTHO05D008372 2.1e-39 167.2 165 53.3
Mapoly0173s0019 Marchantia polymorpha HOM05D006659 ORTHO05D008372 6.2e-39 165.6 179 47.5
Cre05.g246800 Chlamydomonas reinhardtii HOM05D006659 ORTHO05D008372 6.0e-34 149.1 145 53.1
CBR_g10809 Chara braunii HOM05D006659 ORTHO05D008372 1.3e-33 147.9 211 43.1
Oeu053835.1 Olea europaea HOM05D006659 ORTHO05D008372 1.6e-31 141.0 119 63.0
MCO04G521 Micromonas commoda HOM05D006659 ORTHO05D008372 7.6e-29 132.1 183 41.0
Eucgr.H00371 Eucalyptus grandis HOM05D006659 ORTHO05D008372 9.3e-27 125.2 109 58.7
PRCOL_00006170 Prasinoderma coloniale HOM05D006659 ORTHO05D008372 1.2e-26 124.8 162 42.6


User provided reference genes

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