Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.017G028900 Populus trichocarpa HOM05D006244 ORTHO05D007401 1.3e-168 596.3 301 100.0
Sabra17G0017500 Salix brachista HOM05D006244 ORTHO05D007401 1.4e-157 559.7 301 94.0
Manes.04G043800 Manihot esculenta HOM05D006244 ORTHO05D007401 1.4e-130 469.9 302 77.5
Atru.chr4.1240 Acer truncatum HOM05D006244 ORTHO05D007401 1.5e-116 423.3 301 72.4
QL05p011148 Quercus lobata HOM05D006244 ORTHO05D007401 1.2e-113 413.7 300 68.0
QL10p050150 Quercus lobata HOM05D006244 ORTHO05D007401 1.6e-113 413.3 300 68.3
Gohir.A10G138500 Gossypium hirsutum HOM05D006244 ORTHO05D007401 9.7e-111 404.1 300 66.3
Cfa020094 Carpinus fangiana HOM05D006244 ORTHO05D007401 1.3e-110 403.7 301 67.8
CiPaw.02G053900 Carya illinoinensis HOM05D006244 ORTHO05D007401 1.3e-110 403.7 301 68.4
Gorai.011G141500 Gossypium raimondii HOM05D006244 ORTHO05D007401 8.2e-110 401.0 301 65.8
TAR636G2962 Trochodendron aralioides HOM05D006244 ORTHO05D007401 8.2e-110 401.0 301 65.4
Ciclev10021382m.g Citrus clementina HOM05D006244 ORTHO05D007401 3.1e-109 399.1 301 66.8
Gohir.D10G128300 Gossypium hirsutum HOM05D006244 ORTHO05D007401 4.1e-109 398.7 301 65.4
Dinv22748 Davidia involucrata HOM05D006244 ORTHO05D007401 1.5e-108 396.7 295 67.8
Cpa.g.sc9.298 Carica papaya HOM05D006244 ORTHO05D007401 2.9e-107 392.5 300 65.3
Duzib151G0743 Durio zibethinus HOM05D006244 ORTHO05D007401 3.8e-107 392.1 301 64.1
Duzib175G0007 Durio zibethinus HOM05D006244 ORTHO05D007401 5.0e-107 391.7 301 64.1
COL.COLO4_12977 Corchorus olitorius HOM05D006244 ORTHO05D007401 1.2e-105 387.1 324 60.2
Actinidia11297 Actinidia chinensis HOM05D006244 ORTHO05D007401 1.6e-105 386.7 299 63.2
CSS0032343 Camellia sinensis var. sinensis HOM05D006244 ORTHO05D007401 1.8e-104 383.3 301 61.8
TWI38G0370 Tripterygium wilfordii HOM05D006244 ORTHO05D007401 2.6e-103 379.4 297 64.3
Eucgr.H00368 Eucalyptus grandis HOM05D006244 ORTHO05D007401 2.2e-102 376.3 299 61.2
FAN07G2433 Fragaria x ananassa HOM05D006244 ORTHO05D007401 2.2e-102 376.3 301 62.5
CANSAT78G1025 Cannabis sativa HOM05D006244 ORTHO05D007401 4.8e-102 375.2 301 61.8
Sopen11g020640 Solanum pennellii HOM05D006244 ORTHO05D007401 2.4e-101 372.9 302 61.6
Solyc11g045210.2 Solanum lycopersicum HOM05D006244 ORTHO05D007401 6.9e-101 371.3 302 60.9
FvH4_4g10850 Fragaria vesca HOM05D006244 ORTHO05D007401 1.5e-100 370.2 300 62.3
FAN12G2117 Fragaria x ananassa HOM05D006244 ORTHO05D007401 1.5e-100 370.2 300 62.3
Thecc.04G177000 Theobroma cacao HOM05D006244 ORTHO05D007401 2.6e-100 369.4 301 62.1
Hma1.2p1_0324F.1_g125510 Hydrangea macrophylla HOM05D006244 ORTHO05D007401 3.4e-100 369.0 299 61.2
PGSC0003DMG400022864 Solanum tuberosum HOM05D006244 ORTHO05D007401 3.4e-100 369.0 303 60.7
THA.LOC104803749 Tarenaya hassleriana HOM05D006244 ORTHO05D007401 5.9e-100 368.2 300 62.0
Prupe.1G196900 Prunus persica HOM05D006244 ORTHO05D007401 1.7e-99 366.7 301 60.1
RcHm_v2.0_Chr4g0406631 Rosa chinensis HOM05D006244 ORTHO05D007401 1.1e-98 364.0 301 61.1
Nitab4.5_0004117g0020 Nicotiana tabacum HOM05D006244 ORTHO05D007401 1.4e-98 363.6 301 59.8
Nitab4.5_0008822g0040 Nicotiana tabacum HOM05D006244 ORTHO05D007401 3.2e-98 362.5 301 60.1
Sc19g0002910 Simmondsia chinensis HOM05D006244 ORTHO05D007401 2.1e-97 359.8 300 58.3
Peaxi162Scf00126g00623 Petunia axillaris HOM05D006244 ORTHO05D007401 8.0e-97 357.8 298 60.4
CAN.G31.8 Capsicum annuum HOM05D006244 ORTHO05D007401 1.0e-96 357.5 303 58.7
Sp5g03670 Schrenkiella parvula HOM05D006244 ORTHO05D007401 8.8e-96 354.4 300 60.3
MD04G1042500 Malus domestica HOM05D006244 ORTHO05D007401 1.5e-95 353.6 302 59.6
Lalb_Chr22g0352091 Lupinus albus HOM05D006244 ORTHO05D007401 4.4e-95 352.1 301 59.1
Thhalv10006132m.g Eutrema salsugineum HOM05D006244 ORTHO05D007401 1.3e-94 350.5 300 60.7
Hund03170 Selenicereus undatus HOM05D006244 ORTHO05D007401 1.3e-94 350.5 300 59.0
GSVIVG01010791001 Vitis vinifera HOM05D006244 ORTHO05D007401 1.3e-94 350.5 292 60.6
arahy.Tifrunner.gnm1.ann1.LPC3IP Arachis hypogaea HOM05D006244 ORTHO05D007401 4.8e-94 348.6 305 57.7
Rhsim09G0025200 Rhododendron simsii HOM05D006244 ORTHO05D007401 4.8e-94 348.6 358 50.8
PSO675G8539 Papaver somniferum HOM05D006244 ORTHO05D007401 6.3e-94 348.2 313 56.5
MELO3C009823.2 Cucumis melo HOM05D006244 ORTHO05D007401 1.4e-93 347.1 301 59.8
AUR62023861 Chenopodium quinoa HOM05D006244 ORTHO05D007401 1.8e-93 346.7 301 59.1
SalBow3G2237 Salvia bowleyana HOM05D006244 ORTHO05D007401 1.8e-93 346.7 301 56.8
CsaV3_3G040880 Cucumis sativus L. HOM05D006244 ORTHO05D007401 9.1e-93 344.4 301 59.1
PSO732G0675 Papaver somniferum HOM05D006244 ORTHO05D007401 1.6e-92 343.6 303 57.1
Psat5g289400 Pisum sativum HOM05D006244 ORTHO05D007401 2.0e-92 343.2 301 59.1
Carub.0005s2622 Capsella rubella HOM05D006244 ORTHO05D007401 2.6e-92 342.8 300 58.0
EL10Ac3g05981 Beta vulgaris HOM05D006244 ORTHO05D007401 7.7e-92 341.3 301 58.5
Cc07_g21300 Coffea canephora HOM05D006244 ORTHO05D007401 1.3e-91 340.5 301 55.5
AT3G59490 Arabidopsis thaliana HOM05D006244 ORTHO05D007401 1.7e-91 340.1 300 57.0
BcaC07g40479 Brassica carinata HOM05D006244 ORTHO05D007401 2.2e-91 339.7 300 58.7
TPR.G18836 Trifolium pratense HOM05D006244 ORTHO05D007401 2.2e-91 339.7 301 58.5
Glyma.15G029700 Glycine max HOM05D006244 ORTHO05D007401 2.9e-91 339.3 303 58.1
C08p34500 Brassica napus HOM05D006244 ORTHO05D007401 3.8e-91 339.0 300 58.0
BolC8t51051H Brassica oleracea HOM05D006244 ORTHO05D007401 3.8e-91 339.0 300 58.0
Lj3g0008901 Lotus japonicus HOM05D006244 ORTHO05D007401 3.8e-91 339.0 304 56.9
ClCG10G015550 Citrullus lanatus HOM05D006244 ORTHO05D007401 1.1e-90 337.4 301 57.5
A09p51770 Brassica napus HOM05D006244 ORTHO05D007401 2.5e-90 336.3 300 57.7
BcaNung05942 Brassica carinata HOM05D006244 ORTHO05D007401 4.2e-90 335.5 294 59.2
PGR142G0422 Punica granatum HOM05D006244 ORTHO05D007401 4.2e-90 335.5 303 58.4
AL5G41400 Arabidopsis lyrata HOM05D006244 ORTHO05D007401 9.4e-90 334.3 300 57.3
CARHR169870 Cardamine hirsuta HOM05D006244 ORTHO05D007401 9.4e-90 334.3 300 56.3
HanXRQChr11g0343701 Helianthus annuus HOM05D006244 ORTHO05D007401 9.4e-90 334.3 301 56.5
ECA248G0275 Erigeron canadensis HOM05D006244 ORTHO05D007401 1.6e-89 333.6 301 56.1
A04p02170 Brassica napus HOM05D006244 ORTHO05D007401 2.1e-89 333.2 300 57.0
AUR62002326 Chenopodium quinoa HOM05D006244 ORTHO05D007401 2.1e-89 333.2 301 57.8
MSTRG.9759 Avicennia marina HOM05D006244 ORTHO05D007401 3.6e-89 332.4 301 54.5
BcaB02g08221 Brassica carinata HOM05D006244 ORTHO05D007401 4.7e-89 332.0 300 58.7
Aqoxy2G04144 Aquilegia oxysepala HOM05D006244 ORTHO05D007401 6.1e-89 331.6 301 55.5
BcaC07g40478 Brassica carinata HOM05D006244 ORTHO05D007401 1.4e-88 330.5 300 57.0
BraA04t15944Z Brassica rapa HOM05D006244 ORTHO05D007401 5.2e-88 328.6 300 56.3
Medtr2g098960 Medicago truncatula HOM05D006244 ORTHO05D007401 6.7e-88 328.2 301 55.8
Migut.G01000 Erythranthe guttata HOM05D006244 ORTHO05D007401 1.2e-87 327.4 303 54.8
Lsat_1_v5_gn_1_77900 Lactuca sativa HOM05D006244 ORTHO05D007401 1.5e-87 327.0 301 55.1
Aa31LG10G13810 Aethionema arabicum HOM05D006244 ORTHO05D007401 2.0e-87 326.6 300 56.7
MBI08_g33169_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 2.0e-87 326.6 277 58.8
arahy.Tifrunner.gnm1.ann1.IE55HN Arachis hypogaea HOM05D006244 ORTHO05D007401 3.3e-87 325.9 294 57.5
unitig_0.g2404 Utricularia gibba HOM05D006244 ORTHO05D007401 3.7e-86 322.4 301 52.8
Ah.07g202200 Amaranthus hybridus HOM05D006244 ORTHO05D007401 1.1e-85 320.9 301 54.8
BraA09t40612Z Brassica rapa HOM05D006244 ORTHO05D007401 2.4e-85 319.7 297 55.2
ATR0743G009 Amborella trichopoda HOM05D006244 ORTHO05D007401 4.8e-78 295.4 302 49.0
HPP92_001264 Vanilla planifolia HOM05D006244 ORTHO05D007401 3.5e-76 289.3 310 49.4
HPP92_001248 Vanilla planifolia HOM05D006244 ORTHO05D007401 5.9e-76 288.5 310 49.4
BolC4t24903H Brassica oleracea HOM05D006244 ORTHO05D007401 5.0e-75 285.4 300 52.3
VMungo1080G0762 Vigna mungo HOM05D006244 ORTHO05D007401 5.0e-75 285.4 261 54.8
Nn3g18564 Nelumbo nucifera HOM05D006244 ORTHO05D007401 2.3e-72 276.6 301 47.2
DCAR_028445 Daucus carota HOM05D006244 ORTHO05D007401 1.2e-71 274.2 269 52.8
Actinidia27645 Actinidia chinensis HOM05D006244 ORTHO05D007401 2.4e-69 266.5 210 62.4
Phvul.005G153400 Phaseolus vulgaris HOM05D006244 ORTHO05D007401 3.3e-66 256.1 302 45.7
C04p33420 Brassica napus HOM05D006244 ORTHO05D007401 3.0e-64 249.6 300 50.3
Lju337A6T20 Lonicera japonica HOM05D006244 ORTHO05D007401 1.5e-63 247.3 272 52.6
FAN17G1708 Fragaria x ananassa HOM05D006244 ORTHO05D007401 2.7e-60 236.5 196 60.7
Sed0026513 Sechium edule HOM05D006244 ORTHO05D007401 6.0e-60 235.3 235 54.0
vmacro00644 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 2.8e-57 226.5 196 56.1
Cfa015178 Carpinus fangiana HOM05D006244 ORTHO05D007401 3.2e-53 213.0 171 65.5
Sabra17G0062000 Salix brachista HOM05D006244 ORTHO05D007401 8.6e-51 204.9 120 88.3
MBI08_g09972_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 5.1e-43 179.1 193 51.3
Zm00001eb318410 Zea mays HOM05D006244 ORTHO05D007401 1.2e-41 174.5 250 39.2
vmacro00645 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 1.6e-36 157.5 105 70.5
C04p32460 Brassica napus HOM05D006244 ORTHO05D007401 2.1e-36 157.1 217 43.3
Peaxi162Scf01193g00009 Petunia axillaris HOM05D006244 ORTHO05D007401 9.6e-34 148.3 142 52.8
Peaxi162Scf00066g02019 Petunia axillaris HOM05D006244 ORTHO05D007401 3.6e-33 146.4 190 44.2
Peaxi162Scf00533g00611 Petunia axillaris HOM05D006244 ORTHO05D007401 6.2e-33 145.6 142 52.8
Pp3c9_3600 Physcomitrium patens HOM05D006244 ORTHO05D007401 8.1e-33 145.2 308 30.2
Peaxi162Scf00272g00041 Petunia axillaris HOM05D006244 ORTHO05D007401 3.2e-29 133.3 120 55.8
Peaxi162Scf00627g00001 Petunia axillaris HOM05D006244 ORTHO05D007401 1.0e-27 128.3 120 54.2
Psat5g289440 Pisum sativum HOM05D006244 ORTHO05D007401 5.1e-27 125.9 116 54.3
Peaxi162Scf00404g00815 Petunia axillaris HOM05D006244 ORTHO05D007401 1.3e-25 121.3 145 48.3
Lj6A77G23 Lonicera japonica HOM05D006244 ORTHO05D007401 4.8e-25 119.4 101 62.4
Os09g0515300 Oryza sativa ssp. japonica HOM05D006244 ORTHO05D007401 2.2e-22 110.5 116 44.0
SMO364G0376 Selaginella moellendorffii HOM05D006244 ORTHO05D007401 6.4e-22 109.0 281 29.5
Glyma.13G344600 Glycine max HOM05D006244 ORTHO05D007401 4.3e-18 96.3 64 70.3
BcaC02g10138 Brassica carinata HOM05D006244 ORTHO05D007401 2.2e-14 84.0 245 31.0
Lju337A6G22 Lonicera japonica HOM05D006244 ORTHO05D007401 3.8e-14 83.2 67 56.7
Lj6C77T3 Lonicera japonica HOM05D006244 ORTHO05D007401 8.4e-14 82.0 66 57.6
Peaxi162Scf00255g00049 Petunia axillaris HOM05D006244 ORTHO05D007401 1.3e-11 74.7 85 48.2
Zm00001eb239190 Zea mays HOM05D001072 ORTHO05D007401 6.2e-09 65.9 65 41.5
AagrBONN_evm.TU.Sc2ySwM_228.3866 Anthoceros agrestis HOM05D006244 ORTHO05D007401 3.1e-08 63.5 118 33.9


User provided reference genes

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