Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.017G027900 Populus trichocarpa HOM05D007972 ORTHO05D010352 7.5e-96 354.0 197 100.0
Sabra17G0016900 Salix brachista HOM05D007972 ORTHO05D010352 3.2e-70 268.9 201 79.6
Sabra17G0017000 Salix brachista HOM05D007972 ORTHO05D010352 4.2e-70 268.5 200 79.0
Manes.04G044100 Manihot esculenta HOM05D007972 ORTHO05D010352 5.4e-54 214.9 208 61.1
Manes.11G122500 Manihot esculenta HOM05D007972 ORTHO05D010352 1.1e-51 207.2 201 57.7
TWI14G1321 Tripterygium wilfordii HOM05D007972 ORTHO05D010352 7.1e-46 188.0 170 62.4
CiPaw.13G024900 Carya illinoinensis HOM05D007972 ORTHO05D010352 8.7e-44 181.0 206 55.8
QL04p029068 Quercus lobata HOM05D007972 ORTHO05D010352 2.5e-43 179.5 191 58.1
Prupe.2G122000 Prunus persica HOM05D007972 ORTHO05D010352 3.7e-42 175.6 192 55.2
TWI59G1165 Tripterygium wilfordii HOM05D007972 ORTHO05D010352 4.8e-42 175.3 194 54.6
Cfa011053 Carpinus fangiana HOM05D007972 ORTHO05D010352 8.2e-42 174.5 198 53.0
VMungo1383G2083 Vigna mungo HOM05D007972 ORTHO05D010352 9.0e-41 171.0 196 52.0
Lalb_Chr01g0021721 Lupinus albus HOM05D007972 ORTHO05D010352 2.0e-40 169.9 199 53.8
RcHm_v2.0_Chr1g0346011 Rosa chinensis HOM05D007972 ORTHO05D010352 2.0e-40 169.9 195 49.7
CANSAT25G1078 Cannabis sativa HOM05D007972 ORTHO05D010352 1.7e-39 166.8 196 50.0
Glyma.18G249100 Glycine max HOM05D007972 ORTHO05D010352 5.0e-39 165.2 188 52.1
Glyma.09G244400 Glycine max HOM05D007972 ORTHO05D010352 1.1e-38 164.1 202 50.0
MD07G1098000 Malus domestica HOM05D007972 ORTHO05D010352 1.0e-36 157.5 176 54.5
TPR.G4718 Trifolium pratense HOM05D007972 ORTHO05D010352 1.8e-36 156.8 191 50.3
TAR636G0859 Trochodendron aralioides HOM05D007972 ORTHO05D010352 2.3e-36 156.4 192 51.6
Ca_08498_v3 Cicer arietinum L. HOM05D007972 ORTHO05D010352 5.1e-36 155.2 160 57.5
Ca_29723_v3 Cicer arietinum L. HOM05D007972 ORTHO05D010352 5.1e-36 155.2 160 57.5
Lj1g0012968 Lotus japonicus HOM05D007972 ORTHO05D010352 4.3e-35 152.1 167 52.1
Peaxi162Scf00853g00034 Petunia axillaris HOM05D007972 ORTHO05D010352 4.3e-35 152.1 190 50.0
RcHm_v2.0_Chr1g0346041 Rosa chinensis HOM05D007972 ORTHO05D010352 7.4e-35 151.4 194 47.9
Medtr7g092700 Medicago truncatula HOM05D007972 ORTHO05D010352 1.3e-34 150.6 198 49.0
Nitab4.5_0000563g0210 Nicotiana tabacum HOM05D007972 ORTHO05D010352 2.8e-34 149.4 192 49.5
Oeu037442.1 Olea europaea HOM05D007972 ORTHO05D010352 3.7e-34 149.1 194 53.6
Psat3g070000 Pisum sativum HOM05D007972 ORTHO05D010352 3.7e-34 149.1 189 49.2
MD02G1218900 Malus domestica HOM05D007972 ORTHO05D010352 4.8e-34 148.7 194 48.5
TPR.G28769 Trifolium pratense HOM05D007972 ORTHO05D010352 8.2e-34 147.9 162 53.7
Nitab4.5_0004837g0020 Nicotiana tabacum HOM05D007972 ORTHO05D010352 1.4e-33 147.1 192 50.0
Nn1g00786 Nelumbo nucifera HOM05D007972 ORTHO05D010352 5.3e-33 145.2 191 47.1
VMungo1383G2794 Vigna mungo HOM05D007972 ORTHO05D010352 5.3e-33 145.2 181 50.3
Lj5g0008867 Lotus japonicus HOM05D007972 ORTHO05D010352 1.2e-32 144.1 187 47.1
TPR.G14096 Trifolium pratense HOM05D007972 ORTHO05D010352 2.6e-32 142.9 189 50.3
Medtr7g092710 Medicago truncatula HOM05D007972 ORTHO05D010352 3.4e-32 142.5 192 46.9
Medtr7g081655 Medicago truncatula HOM05D007972 ORTHO05D010352 4.5e-32 142.1 189 48.7
MBI04_g13845_MAGBIO Magnolia biondii HOM05D007972 ORTHO05D010352 1.7e-31 140.2 195 45.6
Glyma.09G244600 Glycine max HOM05D007972 ORTHO05D010352 4.2e-30 135.6 191 46.6
Psat3g099040 Pisum sativum HOM05D007972 ORTHO05D010352 1.2e-29 134.0 165 52.7
Solyc01g089890.3 Solanum lycopersicum HOM05D007972 ORTHO05D010352 7.9e-29 131.3 180 46.7
CAN.G1585.6 Capsicum annuum HOM05D007972 ORTHO05D010352 2.3e-28 129.8 193 45.6
Migut.B01509 Erythranthe guttata HOM05D007972 ORTHO05D010352 8.8e-28 127.9 165 50.3
Eucgr.E01542 Eucalyptus grandis HOM05D007972 ORTHO05D010352 2.4e-25 119.8 192 41.7
PGSC0003DMG401031172 Solanum tuberosum HOM05D007972 ORTHO05D010352 9.1e-25 117.9 195 44.6
Eucgr.E01544 Eucalyptus grandis HOM05D007972 ORTHO05D010352 4.5e-24 115.5 192 41.1
CAN.G1585.7 Capsicum annuum HOM05D007972 ORTHO05D010352 1.0e-23 114.4 178 47.2
AUR62032352 Chenopodium quinoa HOM05D007972 ORTHO05D010352 1.7e-23 113.6 160 45.6
Sopen01g035730 Solanum pennellii HOM05D007972 ORTHO05D010352 2.9e-23 112.8 145 49.7
AUR62041847 Chenopodium quinoa HOM05D007972 ORTHO05D010352 3.8e-23 112.5 171 46.8
Sopen01g035720 Solanum pennellii HOM05D007972 ORTHO05D010352 1.1e-22 110.9 180 46.1
PGSC0003DMG400031171 Solanum tuberosum HOM05D007972 ORTHO05D010352 2.5e-22 109.8 186 45.2
Solyc01g089880.3 Solanum lycopersicum HOM05D007972 ORTHO05D010352 7.2e-22 108.2 188 43.1
Glyma.18G248700 Glycine max HOM05D007972 ORTHO05D010352 8.2e-18 94.7 197 36.0
QL04p029065 Quercus lobata HOM05D007972 ORTHO05D010352 7.0e-17 91.7 175 42.3
Phvul.008G048700 Phaseolus vulgaris HOM05D007972 ORTHO05D010352 1.5e-16 90.5 178 36.5
Eucgr.E01539 Eucalyptus grandis HOM05D007972 ORTHO05D010352 3.5e-16 89.4 194 33.5
Phvul.008G048532 Phaseolus vulgaris HOM05D007972 ORTHO05D010352 2.5e-14 83.2 101 50.5
Phvul.008G048466 Phaseolus vulgaris HOM05D007972 ORTHO05D010352 3.3e-11 72.8 81 48.1
Nn1g00784 Nelumbo nucifera HOM05D044854 ORTHO05D010352 4.8e-10 68.9 151 37.7
Eucgr.E01540 Eucalyptus grandis HOM05D007972 ORTHO05D010352 1.8e-09 67.0 112 41.1
EL10Ac2g02566 Beta vulgaris HOM05D007972 ORTHO05D010352 5.9e-08 62.0 73 52.1
MD10G1191700 Malus domestica HOM05D000490 ORTHO05D000785 1.0e-07 61.2 167 31.7
Sc09g0003980 Simmondsia chinensis HOM05D000490 ORTHO05D000785 1.0e-07 61.2 178 27.5
ClCG07G000640 Citrullus lanatus HOM05D000490 ORTHO05D000785 1.3e-07 60.8 142 31.7
MD05G1204600 Malus domestica HOM05D000490 ORTHO05D000785 1.3e-07 60.8 173 30.6
RcHm_v2.0_Chr6g0289341 Rosa chinensis HOM05D000490 ORTHO05D000785 2.9e-07 59.7 144 32.6
FAN27G2513 Fragaria x ananassa HOM05D000490 ORTHO05D000785 1.1e-06 57.8 144 34.0
RcHm_v2.0_Chr3g0450661 Rosa chinensis HOM05D000490 ORTHO05D000785 1.1e-06 57.8 168 30.4
Cfa006408 Carpinus fangiana HOM05D000490 ORTHO05D000785 1.5e-06 57.4 166 34.9
QL12p042822 Quercus lobata HOM05D000490 ORTHO05D000785 1.9e-06 57.0 160 31.2
CiPaw.03G258500 Carya illinoinensis HOM05D000490 ORTHO05D000785 2.5e-06 56.6 166 31.9
Manes.11G122400 Manihot esculenta HOM05D007972 ORTHO05D249992 2.5e-06 56.6 87 44.8
Actinidia40091 Actinidia chinensis HOM05D000490 ORTHO05D000785 3.2e-06 56.2 136 37.5
CiPaw.08G122800 Carya illinoinensis HOM05D000490 ORTHO05D000785 4.2e-06 55.8 137 30.7
MELO3C014307.2 Cucumis melo HOM05D000490 ORTHO05D000785 4.2e-06 55.8 142 31.0
FvH4_2g22330 Fragaria vesca HOM05D000490 ORTHO05D000785 4.2e-06 55.8 174 32.8
Sed0011012 Sechium edule HOM05D000490 ORTHO05D000785 4.2e-06 55.8 130 30.8
Aqoxy2G03553 Aquilegia oxysepala HOM05D000490 ORTHO05D000785 5.5e-06 55.5 181 29.3
CSS0014374 Camellia sinensis var. sinensis HOM05D000490 ORTHO05D000785 5.5e-06 55.5 130 36.9
CSS0028104 Camellia sinensis var. sinensis HOM05D000490 ORTHO05D000785 5.5e-06 55.5 130 36.9
CsaV3_2G013680 Cucumis sativus L. HOM05D000490 ORTHO05D000785 5.5e-06 55.5 142 31.7
CSS0026189 Camellia sinensis var. sinensis HOM05D000490 ORTHO05D000785 7.2e-06 55.1 130 36.9
Glyma.20G225600 Glycine max HOM05D000490 ORTHO05D000785 7.2e-06 55.1 175 28.6
Lsat_1_v5_gn_5_133620 Lactuca sativa HOM05D000490 ORTHO05D000785 7.2e-06 55.1 128 32.8
TPR.G12775 Trifolium pratense HOM05D000490 ORTHO05D000785 7.2e-06 55.1 186 28.0
Dinv20291 Davidia involucrata HOM05D000490 ORTHO05D000785 9.4e-06 54.7 180 28.3


User provided reference genes

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