Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.017G027500 Populus trichocarpa HOM05D006266 ORTHO05D008016 0.0e+00 1295.0 623 100.0
Sabra17G0016500 Salix brachista HOM05D006266 ORTHO05D008016 0.0e+00 1240.7 623 95.2
Manes.11G123500 Manihot esculenta HOM05D006266 ORTHO05D008016 2.9e-303 1044.6 628 80.3
Duzib151G0889 Durio zibethinus HOM05D006266 ORTHO05D008016 1.4e-300 1035.8 639 77.8
Gohir.A10G139200 Gossypium hirsutum HOM05D006266 ORTHO05D008016 3.9e-300 1034.2 639 77.3
Atru.chr4.1256 Acer truncatum HOM05D006266 ORTHO05D008016 1.7e-298 1028.9 635 77.8
Thecc.04G175700 Theobroma cacao HOM05D006266 ORTHO05D008016 3.7e-298 1027.7 639 77.2
Gorai.011G140700 Gossypium raimondii HOM05D006266 ORTHO05D008016 3.1e-297 1024.6 639 76.7
Prupe.1G197500 Prunus persica HOM05D006266 ORTHO05D008016 9.1e-297 1023.1 619 78.8
Gohir.D10G127600 Gossypium hirsutum HOM05D006266 ORTHO05D008016 1.6e-296 1022.3 639 76.5
CANSAT78G1968 Cannabis sativa HOM05D006266 ORTHO05D008016 2.6e-296 1021.5 616 79.7
QL10p050722 Quercus lobata HOM05D006266 ORTHO05D008016 8.5e-295 1016.5 646 76.0
Dinv44175 Davidia involucrata HOM05D006266 ORTHO05D008016 2.0e-291 1005.4 628 76.8
Ciclev10019615m.g Citrus clementina HOM05D006266 ORTHO05D008016 3.7e-290 1001.1 540 85.6
Cfa015189 Carpinus fangiana HOM05D006266 ORTHO05D008016 3.5e-288 994.6 551 84.0
FvH4_4g10960 Fragaria vesca HOM05D006266 ORTHO05D008016 1.0e-287 993.0 548 83.6
TAR362G0699 Trochodendron aralioides HOM05D006266 ORTHO05D008016 1.3e-287 992.6 551 83.3
Sed0000993 Sechium edule HOM05D006266 ORTHO05D008016 3.8e-287 991.1 571 80.9
CiPaw.02G052400 Carya illinoinensis HOM05D006266 ORTHO05D008016 8.5e-287 989.9 537 84.5
Lj3g0007796 Lotus japonicus HOM05D006266 ORTHO05D008016 4.2e-286 987.6 543 84.0
ClCG05G007190 Citrullus lanatus HOM05D006266 ORTHO05D008016 2.1e-285 985.3 639 74.0
Lalb_Chr14g0372511 Lupinus albus HOM05D006266 ORTHO05D008016 2.7e-285 984.9 541 85.0
Sc19g0002870 Simmondsia chinensis HOM05D006266 ORTHO05D008016 2.7e-285 984.9 549 82.7
GSVIVG01010835001 Vitis vinifera HOM05D006266 ORTHO05D008016 3.6e-285 984.6 537 84.4
Ca_01251_v3 Cicer arietinum L. HOM05D006266 ORTHO05D008016 6.1e-285 983.8 546 83.5
Nn7g37595 Nelumbo nucifera HOM05D006266 ORTHO05D008016 6.1e-285 983.8 551 82.2
THA.LOC104805138 Tarenaya hassleriana HOM05D006266 ORTHO05D008016 5.7e-283 977.2 595 76.3
TPR.G18865 Trifolium pratense HOM05D006266 ORTHO05D008016 1.3e-282 976.1 548 81.9
Phvul.005G153800 Phaseolus vulgaris HOM05D006266 ORTHO05D008016 2.8e-282 974.9 586 77.8
Glyma.15G029200 Glycine max HOM05D006266 ORTHO05D008016 2.4e-281 971.8 545 81.7
Psat5g289640 Pisum sativum HOM05D006266 ORTHO05D008016 7.0e-281 970.3 623 74.0
HanXRQChr01g0023481 Helianthus annuus HOM05D006266 ORTHO05D008016 2.7e-280 968.4 580 79.0
PSO675G5931 Papaver somniferum HOM05D006266 ORTHO05D008016 2.7e-280 968.4 552 81.9
BcaC02g12401 Brassica carinata HOM05D006266 ORTHO05D008016 4.5e-280 967.6 639 73.1
BraA05t19361Z Brassica rapa HOM05D006266 ORTHO05D008016 4.5e-280 967.6 629 74.2
Eucgr.H00345 Eucalyptus grandis HOM05D006266 ORTHO05D008016 4.5e-280 967.6 537 82.3
A05p03740 Brassica napus HOM05D006266 ORTHO05D008016 7.7e-280 966.8 619 75.0
MBI07_g02893_MAGBIO Magnolia biondii HOM05D006266 ORTHO05D008016 7.7e-280 966.8 551 81.7
Aa31LG1G25150 Aethionema arabicum HOM05D006266 ORTHO05D008016 1.7e-279 965.7 550 80.5
Migut.G01347 Erythranthe guttata HOM05D006266 ORTHO05D008016 2.3e-279 965.3 630 73.3
Aqoxy2G04160 Aquilegia oxysepala HOM05D006266 ORTHO05D008016 5.0e-279 964.1 540 83.0
VMungo1080G0961 Vigna mungo HOM05D006266 ORTHO05D008016 6.6e-279 963.8 566 79.0
arahy.Tifrunner.gnm1.ann1.JU07H9 Arachis hypogaea HOM05D006266 ORTHO05D008016 8.6e-279 963.4 549 82.1
RcHm_v2.0_Chr4g0406421 Rosa chinensis HOM05D006266 ORTHO05D008016 8.6e-279 963.4 593 76.7
Thhalv10001353m.g Eutrema salsugineum HOM05D006266 ORTHO05D008016 1.1e-278 963.0 548 81.0
C04p04440 Brassica napus HOM05D006266 ORTHO05D008016 1.5e-278 962.6 549 80.9
BolC4t22077H Brassica oleracea HOM05D006266 ORTHO05D008016 1.5e-278 962.6 549 80.9
PGR142G3304 Punica granatum HOM05D006266 ORTHO05D008016 2.5e-278 961.8 577 78.2
ATR0743G015 Amborella trichopoda HOM05D006266 ORTHO05D008016 3.3e-278 961.4 550 80.5
AT2G43400 Arabidopsis thaliana HOM05D006266 ORTHO05D008016 3.3e-278 961.4 548 81.2
arahy.Tifrunner.gnm1.ann1.D6UD48 Arachis hypogaea HOM05D006266 ORTHO05D008016 3.3e-278 961.4 549 81.8
Solyc12g021170.2 Solanum lycopersicum HOM05D006266 ORTHO05D008016 1.4e-276 956.1 548 80.5
CARHR138470 Cardamine hirsuta HOM05D006266 ORTHO05D008016 2.3e-276 955.3 627 72.7
Carub.0004s2587 Capsella rubella HOM05D006266 ORTHO05D008016 3.0e-276 954.9 566 78.8
AL4G42140 Arabidopsis lyrata HOM05D006266 ORTHO05D008016 5.2e-276 954.1 621 74.2
FAN17G0658 Fragaria x ananassa HOM05D006266 ORTHO05D008016 8.9e-276 953.4 548 81.0
Sp4g25480 Schrenkiella parvula HOM05D006266 ORTHO05D008016 8.9e-276 953.4 620 73.5
Hund12414 Selenicereus undatus HOM05D006266 ORTHO05D008016 8.9e-276 953.4 616 74.4
Sopen12g011050 Solanum pennellii HOM05D006266 ORTHO05D008016 6.3e-274 947.2 537 81.6
CsaV3_3G015950 Cucumis sativus L. HOM05D006266 ORTHO05D008016 1.6e-272 942.6 583 76.8
Lsat_1_v5_gn_1_77821 Lactuca sativa HOM05D006266 ORTHO05D008016 3.5e-272 941.4 635 71.7
CDE09G1029 Ceratophyllum demersum HOM05D006266 ORTHO05D008016 5.0e-271 937.6 639 71.5
Nitab4.5_0001990g0030 Nicotiana tabacum HOM05D006266 ORTHO05D008016 3.3e-270 934.9 557 78.5
vmacro00635 Vaccinium macrocarpon HOM05D006266 ORTHO05D008016 9.5e-270 933.3 655 69.6
Nitab4.5_0000505g0020 Nicotiana tabacum HOM05D006266 ORTHO05D008016 1.2e-269 932.9 557 77.6
Oeu024477.1 Olea europaea HOM05D006266 ORTHO05D008016 4.7e-269 931.0 599 74.1
SGA_v2.0_scaffold17G08154 Striga asiatica HOM05D006266 ORTHO05D008016 5.2e-268 927.5 608 72.9
MD04G1042900 Malus domestica HOM05D006266 ORTHO05D008016 9.8e-267 923.3 548 79.0
MSTRG.4284 Avicennia marina HOM05D006266 ORTHO05D008016 1.3e-266 922.9 646 68.7
HPP92_022167 Vanilla planifolia HOM05D006266 ORTHO05D008016 3.7e-266 921.4 545 77.8
Actinidia27081 Actinidia chinensis HOM05D006266 ORTHO05D008016 4.6e-264 914.4 551 78.2
Cpa.g.sc9.312 Carica papaya HOM05D006266 ORTHO05D008016 4.9e-258 894.4 631 71.2
ECA248G0977 Erigeron canadensis HOM05D006266 ORTHO05D008016 4.9e-258 894.4 514 79.4
Haze_01464 Corylus avellana HOM05D006266 ORTHO05D008016 1.9e-257 892.5 774 60.3
CAN.G51.9 Capsicum annuum HOM05D006266 ORTHO05D008016 7.1e-257 890.6 610 69.8
Medtr2g099040 Medicago truncatula HOM05D006266 ORTHO05D008016 2.1e-256 889.0 528 78.0
DCAR_028531 Daucus carota HOM05D006266 ORTHO05D008016 1.7e-255 885.9 557 75.4
Peaxi162Scf00184g00418 Petunia axillaris HOM05D006266 ORTHO05D008016 5.2e-252 874.4 606 70.1
PSO017G5469 Papaver somniferum HOM05D006266 ORTHO05D008016 2.0e-251 872.5 552 75.4
Pp3c26_13090 Physcomitrium patens HOM05D006266 ORTHO05D008016 1.3e-250 869.8 584 69.7
Rhsim09G0023000 Rhododendron simsii HOM05D006266 ORTHO05D008016 1.2e-248 863.2 761 58.6
Dinv44151 Davidia involucrata HOM05D006266 ORTHO05D008016 1.5e-246 856.3 468 83.5
SMO141G0282 Selaginella moellendorffii HOM05D006266 ORTHO05D008016 2.1e-245 852.4 540 73.0
Hma1.2p1_0324F.1_g125550 Hydrangea macrophylla HOM05D006266 ORTHO05D008016 5.2e-244 847.8 467 82.2
Lj3C32G4 Lonicera japonica HOM05D006266 ORTHO05D008016 3.0e-239 832.0 583 69.6
Lj3C1G0 Lonicera japonica HOM05D006266 ORTHO05D008016 3.3e-238 828.6 583 69.3
AUR62023848 Chenopodium quinoa HOM05D006266 ORTHO05D008016 3.5e-232 808.5 568 69.2
Hma1.2p1_0324F.1_g125560 Hydrangea macrophylla HOM05D006266 ORTHO05D008016 4.6e-224 781.6 432 81.7
AagrBONN_evm.TU.Sc2ySwM_117.3933 Anthoceros agrestis HOM05D006266 ORTHO05D008016 6.7e-223 777.7 495 73.1
MELO3C006793.2 Cucumis melo HOM05D006266 ORTHO05D008016 3.1e-196 689.1 449 73.5
Mapoly0012s0124 Marchantia polymorpha HOM05D006266 ORTHO05D008016 5.1e-191 671.8 514 64.8
Cre02.g094300 Chlamydomonas reinhardtii HOM05D006266 ORTHO05D008016 2.0e-190 669.8 550 57.8
Cc03_g11970 Coffea canephora HOM05D006266 ORTHO05D008016 6.5e-186 654.8 369 81.3
PRCOL_00003135 Prasinoderma coloniale HOM05D006266 ORTHO05D008016 3.0e-175 619.4 586 54.3
AUR62002342 Chenopodium quinoa HOM05D006266 ORTHO05D008016 3.7e-173 612.5 441 66.9
Cfa026422 Carpinus fangiana HOM05D006266 ORTHO05D008016 8.0e-168 594.7 539 56.8
Haze_26227 Corylus avellana HOM05D006266 ORTHO05D008016 2.8e-165 586.3 556 52.0
Haze_26951 Corylus avellana HOM05D006266 ORTHO05D008016 2.3e-162 576.6 559 52.1
Zm00001eb043590 Zea mays HOM05D006266 ORTHO05D008016 1.1e-153 547.7 348 74.1
Ah.07g202330 Amaranthus hybridus HOM05D006266 ORTHO05D008016 2.7e-139 500.0 421 63.9
unitig_52.g17681 Utricularia gibba HOM05D006266 ORTHO05D008016 1.1e-121 441.4 433 55.9
SEGI_14637 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 9.9e-118 428.3 272 75.4
Eucgr.L02537 Eucalyptus grandis HOM05D006266 ORTHO05D008016 5.1e-98 362.8 202 78.7
Ah.07g202340 Amaranthus hybridus HOM05D006266 ORTHO05D008016 8.7e-98 362.1 201 80.1
FAN12G3251 Fragaria x ananassa HOM05D006266 ORTHO05D008016 7.2e-84 315.8 180 83.3
EL10Ac3g06005 Beta vulgaris HOM05D006266 ORTHO05D008016 1.1e-81 308.5 254 65.0
PGSC0003DMG400014944 Solanum tuberosum HOM05D006266 ORTHO05D008016 1.0e-77 295.4 172 76.2
Cc03_g11980 Coffea canephora HOM05D006266 ORTHO05D008016 1.6e-75 288.1 174 77.6
Sopen02g004370 Solanum pennellii HOM05D006266 ORTHO05D008016 2.1e-75 287.7 170 80.0
SEGI_11902 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 9.8e-57 225.7 150 71.3
CSS0026769 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 1.9e-52 211.5 119 80.7
CSS0016449 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 5.7e-49 199.9 106 90.6
Os10g0516300 Oryza sativa ssp. japonica HOM05D006266 ORTHO05D008016 2.2e-48 198.0 116 76.7
MELO3C006791.2 Cucumis melo HOM05D005231 ORTHO05D006387 9.5e-36 156.0 143 60.8
CSS0001057 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 1.6e-35 155.2 127 64.6
SEGI_08796 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 6.8e-34 149.8 82 79.3
CSS0026763 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 8.9e-34 149.4 127 62.2
SEGI_29623 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 5.0e-29 133.7 89 75.3
CSS0001558 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 1.1e-26 125.9 112 61.6
CSS0004821 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 1.1e-26 125.9 112 61.6
CSS0016187 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 4.0e-18 97.4 78 66.7
arahy.Tifrunner.gnm1.ann1.QA6FBH Arachis hypogaea HOM05D006266 ORTHO05D008016 2.1e-14 85.1 56 75.0
Lsat_1_v5_gn_7_84681 Lactuca sativa HOM05D006266 ORTHO05D004407 2.7e-14 84.7 56 69.6
CSS0019028 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D024694 4.0e-10 70.9 41 80.5
CSS0026903 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 9.0e-10 69.7 59 55.9
CSS0008442 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D024694 4.4e-09 67.4 40 77.5
CSS0022444 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D024694 4.4e-09 67.4 40 77.5
Sp4g25500 Schrenkiella parvula HOM05D000001 ORTHO05D000003 9.9e-09 66.2 81 46.9
CSS0006121 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 2.9e-08 64.7 43 67.4
AUR62006021 Chenopodium quinoa HOM05D001494 ORTHO05D001364 3.2e-07 61.2 42 64.3


User provided reference genes

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