Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.017G021796 Populus trichocarpa HOM05D010635 ORTHO05D006336 5.3e-66 254.2 128 100.0
Potri.017G022262 Populus trichocarpa HOM05D010635 ORTHO05D006336 1.9e-55 219.2 121 90.1
Potri.017G019932 Populus trichocarpa HOM05D010635 ORTHO05D006336 2.8e-51 205.3 128 81.2
Potri.017G018901 Populus trichocarpa HOM05D010635 ORTHO05D006336 1.5e-49 199.5 117 83.8
Sabra17G0002100 Salix brachista HOM05D010635 ORTHO05D006336 2.5e-47 192.2 128 74.2
Sabra17G0014600 Salix brachista HOM05D010635 ORTHO05D006336 7.1e-47 190.7 128 73.4
Potri.017G019000 Populus trichocarpa HOM05D010635 ORTHO05D006336 3.5e-46 188.3 111 85.6
Potri.013G084650 Populus trichocarpa HOM05D010635 ORTHO05D006336 1.1e-31 140.2 97 75.3
Sabra07G0120000 Salix brachista HOM05D010635 ORTHO05D006336 1.4e-21 106.7 111 50.5
Sabra07G0108000 Salix brachista HOM05D010635 ORTHO05D006336 1.4e-18 96.7 111 51.4
Sabra07G0119900 Salix brachista HOM05D010635 ORTHO05D006336 7.0e-18 94.4 111 50.5
Sabra07G0108100 Salix brachista HOM05D010635 ORTHO05D006336 1.6e-17 93.2 126 44.4
Ciclev10023596m.g Citrus clementina HOM05D010635 ORTHO05D006336 1.0e-16 90.5 108 45.4
Potri.007G133200 Populus trichocarpa HOM05D010635 ORTHO05D006336 1.0e-16 90.5 121 43.8
Sabra07G0108200 Salix brachista HOM05D010635 ORTHO05D006336 1.3e-16 90.1 111 49.5
Ciclev10023402m.g Citrus clementina HOM05D007277 ORTHO05D006336 6.5e-16 87.8 107 43.9
Sabra03G0023900 Salix brachista HOM05D010635 ORTHO05D006336 6.5e-16 87.8 114 43.9
Sabra07G0120400 Salix brachista HOM05D010635 ORTHO05D006336 3.2e-15 85.5 99 49.5
QL07p042879 Quercus lobata HOM05D007277 ORTHO05D006336 3.6e-14 82.0 106 43.4
QL07p042995 Quercus lobata HOM05D007277 ORTHO05D006336 3.6e-14 82.0 137 37.2
Atru.chr4.1305 Acer truncatum HOM05D010298 ORTHO05D006336 4.7e-14 81.6 117 40.2
Ciclev10023444m.g Citrus clementina HOM05D007277 ORTHO05D006336 8.0e-14 80.9 107 41.1
Atru.chr4.1303 Acer truncatum HOM05D010298 ORTHO05D012539 1.4e-13 80.1 125 43.2
QL07p042908 Quercus lobata HOM05D007277 ORTHO05D006336 1.8e-13 79.7 108 39.8
QL10p012835 Quercus lobata HOM05D007277 ORTHO05D006336 2.3e-13 79.3 113 38.9
QL10p052020 Quercus lobata HOM05D007277 ORTHO05D006336 3.0e-13 79.0 115 39.1
QL10p051898 Quercus lobata HOM05D007277 ORTHO05D006336 4.0e-13 78.6 113 39.8
QL07p042903 Quercus lobata HOM05D007277 ORTHO05D006336 1.5e-12 76.6 106 44.3
QL10p048111 Quercus lobata HOM05D010635 ORTHO05D006336 1.5e-12 76.6 109 40.4
DCAR_010189 Daucus carota HOM05D007277 ORTHO05D006336 2.6e-12 75.9 109 36.7
QL07p042983 Quercus lobata HOM05D007277 ORTHO05D006336 4.4e-12 75.1 107 41.1
Haze_24866 Corylus avellana HOM05D007277 ORTHO05D006336 5.7e-12 74.7 96 40.6
QL07p042928 Quercus lobata HOM05D007277 ORTHO05D006336 1.3e-11 73.6 106 43.4
Cfa002615 Carpinus fangiana HOM05D007277 ORTHO05D006336 4.8e-11 71.6 100 40.0
Cfa021203 Carpinus fangiana HOM05D007277 ORTHO05D006336 6.3e-11 71.2 106 40.6
Sabra07G0119800 Salix brachista HOM05D010635 ORTHO05D006336 6.3e-11 71.2 107 43.0
Cfa002614 Carpinus fangiana HOM05D007277 ORTHO05D006336 1.1e-10 70.5 100 41.0
Haze_27687 Corylus avellana HOM05D007277 ORTHO05D006336 1.4e-10 70.1 100 36.0
Haze_27688 Corylus avellana HOM05D007277 ORTHO05D006336 1.4e-10 70.1 100 36.0
CSS0000915 Camellia sinensis var. sinensis HOM05D007277 ORTHO05D006336 2.4e-10 69.3 108 33.3
Dinv38624 Davidia involucrata HOM05D007277 ORTHO05D006336 2.4e-10 69.3 111 35.1
QL10p047937 Quercus lobata HOM05D007277 ORTHO05D006336 2.4e-10 69.3 123 30.1
Haze_24862 Corylus avellana HOM05D007277 ORTHO05D006336 4.1e-10 68.6 116 36.2
Ciclev10024327m.g Citrus clementina HOM05D007277 ORTHO05D006336 5.4e-10 68.2 96 41.7
Haze_24863 Corylus avellana HOM05D000010 ORTHO05D006336 7.0e-10 67.8 119 32.8
FAN13G2869 Fragaria x ananassa HOM05D007277 ORTHO05D006336 7.0e-10 67.8 113 32.7
Rhsim12G0165400 Rhododendron simsii HOM05D007277 ORTHO05D006336 1.2e-09 67.0 107 34.6
Dinv36831 Davidia involucrata HOM05D007277 ORTHO05D006336 2.7e-09 65.9 105 39.0
Thecc.03G110900 Theobroma cacao HOM05D007277 ORTHO05D006336 5.9e-09 64.7 107 33.6
Manes.05G115300 Manihot esculenta HOM05D007277 ORTHO05D006336 7.7e-09 64.3 110 34.5
Prupe.6G011800 Prunus persica HOM05D007277 ORTHO05D006336 1.7e-08 63.2 115 33.9
Ciclev10024167m.g Citrus clementina HOM05D007277 ORTHO05D006336 2.9e-08 62.4 111 29.7
QL07p042874 Quercus lobata HOM05D007277 ORTHO05D006336 2.9e-08 62.4 110 34.5
Prupe.1G109400 Prunus persica HOM05D007277 ORTHO05D006336 8.5e-08 60.8 115 32.2
Ciclev10029817m.g Citrus clementina HOM05D007277 ORTHO05D006336 1.1e-07 60.5 111 29.7
Atru.chr9.2085 Acer truncatum HOM05D007277 ORTHO05D006336 3.2e-07 58.9 104 35.6
Solyc03g114650.3 Solanum lycopersicum HOM05D007277 ORTHO05D006336 9.4e-07 57.4 104 32.7
Thecc.09G294100 Theobroma cacao HOM05D010298 ORTHO05D012539 9.4e-07 57.4 116 35.3
Sopen03g033720 Solanum pennellii HOM05D007277 ORTHO05D006336 1.2e-06 57.0 108 34.3
Actinidia22592 Actinidia chinensis HOM05D007277 ORTHO05D006336 1.6e-06 56.6 108 28.7
Cpa.g.sc3.199 Carica papaya HOM05D007277 ORTHO05D006336 1.6e-06 56.6 106 34.0
COL.COLO4_28375 Corchorus olitorius HOM05D010298 ORTHO05D012539 2.1e-06 56.2 109 33.0
RcHm_v2.0_Chr7g0240781 Rosa chinensis HOM05D007277 ORTHO05D006336 2.1e-06 56.2 108 34.3
MD12G1151700 Malus domestica HOM05D007277 ORTHO05D006336 2.7e-06 55.8 125 31.2
Thecc.09G294000 Theobroma cacao HOM05D010298 ORTHO05D012539 2.7e-06 55.8 112 30.4
RcHm_v2.0_Chr7g0241491 Rosa chinensis HOM05D007277 ORTHO05D006336 3.6e-06 55.5 108 33.3
PGSC0003DMG400024676 Solanum tuberosum HOM05D007277 ORTHO05D006336 4.7e-06 55.1 101 31.7


User provided reference genes

Program Settings