Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.017G019932 Populus trichocarpa HOM05D010635 ORTHO05D006336 6.3e-88 327.4 166 100.0
Sabra17G0002100 Salix brachista HOM05D010635 ORTHO05D006336 2.6e-65 252.3 167 77.8
Sabra17G0014600 Salix brachista HOM05D010635 ORTHO05D006336 7.5e-65 250.8 167 77.2
Potri.013G084650 Populus trichocarpa HOM05D010635 ORTHO05D006336 1.1e-58 230.3 135 85.9
Potri.017G018901 Populus trichocarpa HOM05D010635 ORTHO05D006336 1.2e-54 216.9 119 92.4
Potri.017G021796 Populus trichocarpa HOM05D010635 ORTHO05D006336 3.6e-51 205.3 128 81.2
Potri.017G022262 Populus trichocarpa HOM05D010635 ORTHO05D006336 8.1e-51 204.1 156 70.5
Potri.017G019000 Populus trichocarpa HOM05D010635 ORTHO05D006336 3.4e-49 198.7 112 90.2
Sabra07G0120000 Salix brachista HOM05D010635 ORTHO05D006336 1.9e-20 103.2 134 45.5
Ciclev10023596m.g Citrus clementina HOM05D010635 ORTHO05D006336 6.9e-18 94.7 134 44.0
Potri.007G133200 Populus trichocarpa HOM05D010635 ORTHO05D006336 1.5e-17 93.6 152 39.5
Sabra07G0108000 Salix brachista HOM05D010635 ORTHO05D006336 3.4e-17 92.4 131 44.3
Sabra07G0108100 Salix brachista HOM05D010635 ORTHO05D006336 7.7e-17 91.3 131 43.5
Sabra07G0119900 Salix brachista HOM05D010635 ORTHO05D006336 1.0e-16 90.9 134 44.0
Ciclev10023402m.g Citrus clementina HOM05D007277 ORTHO05D006336 1.7e-16 90.1 133 42.1
Ciclev10023444m.g Citrus clementina HOM05D007277 ORTHO05D006336 7.2e-15 84.7 135 39.3
Sabra07G0108200 Salix brachista HOM05D010635 ORTHO05D006336 1.2e-14 84.0 130 43.1
Atru.chr4.1305 Acer truncatum HOM05D010298 ORTHO05D006336 2.7e-14 82.8 144 37.5
Sabra03G0023900 Salix brachista HOM05D010635 ORTHO05D006336 3.6e-14 82.4 126 38.9
QL07p042995 Quercus lobata HOM05D007277 ORTHO05D006336 6.1e-14 81.6 122 37.7
Sabra07G0120400 Salix brachista HOM05D010635 ORTHO05D006336 1.0e-13 80.9 132 42.4
QL07p042879 Quercus lobata HOM05D007277 ORTHO05D006336 1.8e-13 80.1 110 40.9
QL10p048111 Quercus lobata HOM05D010635 ORTHO05D006336 1.8e-13 80.1 107 40.2
QL10p012835 Quercus lobata HOM05D007277 ORTHO05D006336 2.3e-13 79.7 131 35.9
QL07p042908 Quercus lobata HOM05D007277 ORTHO05D006336 3.0e-13 79.3 109 39.4
QL10p051898 Quercus lobata HOM05D007277 ORTHO05D006336 5.1e-13 78.6 125 37.6
DCAR_010189 Daucus carota HOM05D007277 ORTHO05D006336 8.8e-13 77.8 107 38.3
QL10p052020 Quercus lobata HOM05D007277 ORTHO05D006336 1.1e-12 77.4 123 36.6
QL07p042903 Quercus lobata HOM05D007277 ORTHO05D006336 2.5e-12 76.3 109 42.2
QL07p042983 Quercus lobata HOM05D007277 ORTHO05D006336 3.3e-12 75.9 108 40.7
Atru.chr4.1303 Acer truncatum HOM05D010298 ORTHO05D012539 7.4e-12 74.7 164 34.8
Haze_24866 Corylus avellana HOM05D007277 ORTHO05D006336 9.7e-12 74.3 95 42.1
QL07p042928 Quercus lobata HOM05D007277 ORTHO05D006336 1.7e-11 73.6 107 42.1
Dinv38624 Davidia involucrata HOM05D007277 ORTHO05D006336 4.8e-11 72.0 112 36.6
Prupe.6G011800 Prunus persica HOM05D007277 ORTHO05D006336 6.3e-11 71.6 151 31.8
Cfa002615 Carpinus fangiana HOM05D007277 ORTHO05D006336 8.2e-11 71.2 148 33.1
Cfa002614 Carpinus fangiana HOM05D007277 ORTHO05D006336 1.4e-10 70.5 102 42.2
CSS0000915 Camellia sinensis var. sinensis HOM05D007277 ORTHO05D006336 2.4e-10 69.7 131 32.8
Cfa021203 Carpinus fangiana HOM05D007277 ORTHO05D006336 2.4e-10 69.7 124 35.5
Thecc.03G110900 Theobroma cacao HOM05D007277 ORTHO05D006336 3.1e-10 69.3 170 30.6
Ciclev10024327m.g Citrus clementina HOM05D007277 ORTHO05D006336 6.9e-10 68.2 97 41.2
COL.COLO4_28375 Corchorus olitorius HOM05D010298 ORTHO05D012539 6.9e-10 68.2 130 36.2
Haze_24862 Corylus avellana HOM05D007277 ORTHO05D006336 1.5e-09 67.0 104 35.6
Haze_27687 Corylus avellana HOM05D007277 ORTHO05D006336 1.5e-09 67.0 129 32.6
Haze_27688 Corylus avellana HOM05D007277 ORTHO05D006336 1.5e-09 67.0 129 32.6
QL07p042874 Quercus lobata HOM05D007277 ORTHO05D006336 2.6e-09 66.2 113 36.3
QL10p047937 Quercus lobata HOM05D007277 ORTHO05D006336 2.6e-09 66.2 119 31.1
Sabra07G0119800 Salix brachista HOM05D010635 ORTHO05D006336 3.4e-09 65.9 106 40.6
Prupe.1G109400 Prunus persica HOM05D007277 ORTHO05D006336 7.7e-09 64.7 117 35.0
TAR636G1532 Trochodendron aralioides HOM05D012741 ORTHO05D006336 7.7e-09 64.7 118 32.2
Ciclev10024167m.g Citrus clementina HOM05D007277 ORTHO05D006336 1.0e-08 64.3 146 27.4
Haze_24863 Corylus avellana HOM05D000010 ORTHO05D006336 1.3e-08 63.9 127 29.1
Rhsim12G0165400 Rhododendron simsii HOM05D007277 ORTHO05D006336 2.9e-08 62.8 153 30.1
Solyc03g114650.3 Solanum lycopersicum HOM05D007277 ORTHO05D006336 2.9e-08 62.8 108 33.3
Thecc.09G294100 Theobroma cacao HOM05D010298 ORTHO05D012539 6.5e-08 61.6 125 35.2
FvH4_5g13170 Fragaria vesca HOM05D007277 ORTHO05D006336 8.5e-08 61.2 132 31.1
Sopen03g033720 Solanum pennellii HOM05D007277 ORTHO05D006336 8.5e-08 61.2 112 34.8
Ciclev10029817m.g Citrus clementina HOM05D007277 ORTHO05D006336 1.1e-07 60.8 146 27.4
COL.COLO4_28831 Corchorus olitorius HOM05D007277 ORTHO05D006336 1.1e-07 60.8 149 33.6
Dinv36831 Davidia involucrata HOM05D007277 ORTHO05D006336 1.1e-07 60.8 105 35.2
Manes.05G115300 Manihot esculenta HOM05D007277 ORTHO05D006336 1.4e-07 60.5 117 34.2
FAN13G2869 Fragaria x ananassa HOM05D007277 ORTHO05D006336 1.9e-07 60.1 124 29.8
PGSC0003DMG400024676 Solanum tuberosum HOM05D007277 ORTHO05D006336 4.2e-07 58.9 152 27.6
FAN18G2501 Fragaria x ananassa HOM05D007277 ORTHO05D006336 5.5e-07 58.5 132 30.3
Gohir.D07G062800 Gossypium hirsutum HOM05D007277 ORTHO05D006336 5.5e-07 58.5 150 28.7
FvH4_5g13230 Fragaria vesca HOM05D007277 ORTHO05D006336 7.2e-07 58.2 132 30.3
Thecc.09G294000 Theobroma cacao HOM05D010298 ORTHO05D012539 9.4e-07 57.8 126 29.4
FvH4_5g13130 Fragaria vesca HOM05D007277 ORTHO05D006336 1.6e-06 57.0 153 26.1
FAN18G0686 Fragaria x ananassa HOM05D007277 ORTHO05D006336 1.6e-06 57.0 153 26.1
Cpa.g.sc3.198 Carica papaya HOM05D007277 ORTHO05D006336 2.1e-06 56.6 104 36.5
Cpa.g.sc3.199 Carica papaya HOM05D007277 ORTHO05D006336 2.7e-06 56.2 104 36.5
FAN18G3246 Fragaria x ananassa HOM05D007277 ORTHO05D006336 2.7e-06 56.2 132 30.3
Cpa.g.sc3.210 Carica papaya HOM05D007277 ORTHO05D006336 3.6e-06 55.8 104 36.5
FAN08G1790 Fragaria x ananassa HOM05D007277 ORTHO05D006336 3.6e-06 55.8 130 29.2
Gohir.A07G058000 Gossypium hirsutum HOM05D007277 ORTHO05D006336 4.7e-06 55.5 150 28.0
FvH4_5g13140 Fragaria vesca HOM05D007277 ORTHO05D006336 6.1e-06 55.1 132 29.5
Gohir.A03G027800 Gossypium hirsutum HOM05D010298 ORTHO05D012539 6.1e-06 55.1 129 31.0
PGSC0003DMG400024518 Solanum tuberosum HOM05D007277 ORTHO05D006336 7.9e-06 54.7 183 24.6


User provided reference genes

Program Settings