Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.017G017200 Populus trichocarpa HOM05D006668 ORTHO05D008252 2.6e-235 818.5 475 100.0
Sabra17G0013400 Salix brachista HOM05D006668 ORTHO05D008252 3.6e-160 568.9 475 75.8
Manes.12G086300 Manihot esculenta HOM05D006668 ORTHO05D008252 6.9e-87 325.5 499 47.1
QL08p040692 Quercus lobata HOM05D006668 ORTHO05D008252 1.7e-77 294.3 506 45.1
Ciclev10015198m.g Citrus clementina HOM05D006668 ORTHO05D008252 9.4e-68 261.9 533 38.8
COL.COLO4_07343 Corchorus olitorius HOM05D006668 ORTHO05D008252 2.6e-65 253.8 505 46.9
Cfa014669 Carpinus fangiana HOM05D006668 ORTHO05D008252 4.4e-65 253.1 505 44.4
Cpa.g.sc165.1 Carica papaya HOM05D006668 ORTHO05D008252 8.2e-64 248.8 495 39.6
Atru.chr6.2861 Acer truncatum HOM05D006668 ORTHO05D008252 3.1e-63 246.9 508 38.6
TWI59G1373 Tripterygium wilfordii HOM05D006668 ORTHO05D008252 4.1e-63 246.5 503 40.8
Duzib132G0616 Durio zibethinus HOM05D006668 ORTHO05D008252 1.9e-60 237.7 505 45.0
RcHm_v2.0_Chr7g0225261 Rosa chinensis HOM05D006668 ORTHO05D008252 1.9e-60 237.7 485 39.8
Glyma.06G287100 Glycine max HOM05D006668 ORTHO05D008252 5.5e-60 236.1 503 38.2
CiPaw.03G182600 Carya illinoinensis HOM05D006668 ORTHO05D008252 2.1e-59 234.2 511 40.5
GSVIVG01020613001 Vitis vinifera HOM05D006668 ORTHO05D008252 1.8e-58 231.1 504 39.3
arahy.Tifrunner.gnm1.ann1.Y4MWM5 Arachis hypogaea HOM05D006668 ORTHO05D008252 1.4e-55 221.5 512 37.7
Hma1.2p1_0002F.1_g002330 Hydrangea macrophylla HOM05D006668 ORTHO05D008252 1.8e-55 221.1 505 43.0
Glyma.12G119000 Glycine max HOM05D006668 ORTHO05D008252 2.4e-55 220.7 505 37.6
Prupe.2G094200 Prunus persica HOM05D006668 ORTHO05D008252 2.4e-55 220.7 507 37.9
Gohir.A08G243900 Gossypium hirsutum HOM05D006668 ORTHO05D008252 4.1e-55 219.9 500 41.0
TAR627G0647 Trochodendron aralioides HOM05D006668 ORTHO05D008252 5.3e-55 219.5 521 38.8
FAN08G3049 Fragaria x ananassa HOM05D006668 ORTHO05D008252 1.0e-53 215.3 482 40.0
Thecc.02G187500 Theobroma cacao HOM05D006668 ORTHO05D008252 3.8e-53 213.4 506 40.9
FvH4_5g30510 Fragaria vesca HOM05D006668 ORTHO05D008252 2.5e-52 210.7 482 40.0
MD15G1126800 Malus domestica HOM05D006668 ORTHO05D008252 4.2e-52 209.9 498 37.8
FAN18G2410 Fragaria x ananassa HOM05D006668 ORTHO05D008252 7.2e-52 209.1 482 40.0
Gorai.004G282700 Gossypium raimondii HOM05D006668 ORTHO05D008252 7.2e-52 209.1 500 40.0
FAN13G2061 Fragaria x ananassa HOM05D006668 ORTHO05D008252 1.0e-50 205.3 482 39.4
Lalb_Chr03g0029681 Lupinus albus HOM05D006668 ORTHO05D008252 4.0e-50 203.4 504 35.7
Ca_18916_v3 Cicer arietinum L. HOM05D006668 ORTHO05D008252 5.2e-50 203.0 507 36.1
Lj3g0004052 Lotus japonicus HOM05D006668 ORTHO05D008252 8.8e-50 202.2 497 34.8
Gohir.D08G264800 Gossypium hirsutum HOM05D006668 ORTHO05D008252 1.5e-49 201.4 500 39.8
PGR142G0029 Punica granatum HOM05D006668 ORTHO05D008252 7.5e-49 199.1 500 36.8
Actinidia10993 Actinidia chinensis HOM05D006668 ORTHO05D008252 8.2e-48 195.7 507 35.9
Medtr4g079100 Medicago truncatula HOM05D006668 ORTHO05D008252 1.8e-47 194.5 509 35.6
vmacro12351 Vaccinium macrocarpon HOM05D006668 ORTHO05D008252 1.3e-45 188.3 523 34.6
Peaxi162Scf00189g00018 Petunia axillaris HOM05D006668 ORTHO05D008252 1.7e-45 188.0 499 34.1
PSO675G8266 Papaver somniferum HOM05D006668 ORTHO05D008252 8.5e-45 185.7 510 34.7
Nn1g06398 Nelumbo nucifera HOM05D006668 ORTHO05D008252 5.5e-44 183.0 417 38.8
Oeu036086.1 Olea europaea HOM05D006668 ORTHO05D008252 7.2e-44 182.6 500 36.8
Sc12g0003270 Simmondsia chinensis HOM05D006668 ORTHO05D008252 1.2e-43 181.8 507 35.3
MBI06_g42697_MAGBIO Magnolia biondii HOM05D006668 ORTHO05D008252 2.1e-43 181.0 531 33.3
Rhsim06G0136200 Rhododendron simsii HOM05D006668 ORTHO05D008252 2.1e-43 181.0 524 35.5
Aqoxy1G02297 Aquilegia oxysepala HOM05D006668 ORTHO05D008252 6.1e-43 179.5 543 34.4
CANSAT54G0862 Cannabis sativa HOM05D006668 ORTHO05D008252 6.1e-43 179.5 499 35.5
TPR.G14253 Trifolium pratense HOM05D006668 ORTHO05D008252 1.8e-42 177.9 520 36.0
Hma1.2p1_0002F.1_g002320 Hydrangea macrophylla HOM05D006668 ORTHO05D008252 4.0e-42 176.8 214 52.8
VMungo0037G0001 Vigna mungo HOM05D006668 ORTHO05D008252 4.0e-42 176.8 496 32.5
PSO541G3384 Papaver somniferum HOM05D006668 ORTHO05D008252 2.0e-41 174.5 513 33.7
Cc05_g07800 Coffea canephora HOM05D006668 ORTHO05D008252 2.6e-41 174.1 495 34.3
ClCG03G006150 Citrullus lanatus HOM05D006668 ORTHO05D008252 4.4e-41 173.3 497 32.8
DCAR_009761 Daucus carota HOM05D006668 ORTHO05D008252 5.7e-41 172.9 500 34.6
ClCG00G003780 Citrullus lanatus HOM05D006668 ORTHO05D008252 2.8e-40 170.6 497 33.0
ClCG02G002300 Citrullus lanatus HOM05D006668 ORTHO05D008252 2.8e-40 170.6 497 33.0
Phvul.010G089800 Phaseolus vulgaris HOM05D006668 ORTHO05D008252 1.4e-39 168.3 500 32.2
PGSC0003DMG400009383 Solanum tuberosum HOM05D006668 ORTHO05D008252 3.1e-39 167.2 501 32.1
Sopen07g027510 Solanum pennellii HOM05D006668 ORTHO05D008252 9.1e-39 165.6 494 32.6
Psat7g136840 Pisum sativum HOM05D006668 ORTHO05D008252 2.7e-38 164.1 506 33.6
CAN.G1808.7 Capsicum annuum HOM05D006668 ORTHO05D008252 5.9e-38 162.9 408 35.3
Hund01006 Selenicereus undatus HOM05D006668 ORTHO05D008252 7.7e-38 162.5 504 31.9
Aa31LG5G3090 Aethionema arabicum HOM05D006668 ORTHO05D008252 1.7e-37 161.4 519 34.1
Sed0009608 Sechium edule HOM05D006668 ORTHO05D008252 3.8e-37 160.2 413 34.6
Eucgr.K01063 Eucalyptus grandis HOM05D006668 ORTHO05D008252 3.3e-36 157.1 509 32.4
MELO3C018863.2 Cucumis melo HOM05D006668 ORTHO05D008252 1.2e-35 155.2 482 31.5
SalBow7G4646 Salvia bowleyana HOM05D006668 ORTHO05D008252 4.0e-34 150.2 505 30.3
CsaV3_7G003140 Cucumis sativus L. HOM05D006668 ORTHO05D008252 8.9e-34 149.1 480 30.8
BcaC06g31649 Brassica carinata HOM05D006668 ORTHO05D008252 1.2e-33 148.7 196 50.0
THA.LOC104801157 Tarenaya hassleriana HOM05D006668 ORTHO05D008252 1.2e-33 148.7 503 30.4
CDE10G0622 Ceratophyllum demersum HOM05D006668 ORTHO05D008252 3.4e-33 147.1 493 30.8
Solyc07g053560.3 Solanum lycopersicum HOM05D006668 ORTHO05D008252 3.4e-33 147.1 493 31.0
SGA_v2.0_scaffold70G23480 Striga asiatica HOM05D006668 ORTHO05D008252 3.4e-33 147.1 493 31.2
SGA_v2.0_scaffold58G20553 Striga asiatica HOM05D006668 ORTHO05D008252 1.7e-32 144.8 482 31.3
BcaC04g21861 Brassica carinata HOM05D006668 ORTHO05D008252 2.2e-32 144.4 496 32.3
Sp2g08980 Schrenkiella parvula HOM05D006668 ORTHO05D008252 8.3e-32 142.5 515 30.9
MSTRG.5024 Avicennia marina HOM05D006668 ORTHO05D008252 1.6e-30 138.3 511 30.9
BolC9t55549H Brassica oleracea HOM05D006668 ORTHO05D008252 3.5e-30 137.1 496 31.5
Carub.0008s0437 Capsella rubella HOM05D006668 ORTHO05D008252 7.8e-30 136.0 511 31.5
AUR62036068 Chenopodium quinoa HOM05D006668 ORTHO05D008252 7.8e-30 136.0 529 29.5
Thhalv10003234m.g Eutrema salsugineum HOM05D006668 ORTHO05D008252 1.0e-29 135.6 229 44.5
C09p26530 Brassica napus HOM05D006668 ORTHO05D008252 1.3e-29 135.2 496 31.2
AL8G15870 Arabidopsis lyrata HOM05D006668 ORTHO05D008252 1.7e-29 134.8 511 30.9
Migut.M00152 Erythranthe guttata HOM05D006668 ORTHO05D008252 1.7e-29 134.8 353 33.1
CARHR179120 Cardamine hirsuta HOM05D006668 ORTHO05D008252 5.0e-29 133.3 277 37.9
ECA232G0319 Erigeron canadensis HOM05D006668 ORTHO05D008252 6.6e-29 132.9 496 29.0
A09p20930 Brassica napus HOM05D006668 ORTHO05D008252 8.6e-29 132.5 493 30.6
BraA09t37693Z Brassica rapa HOM05D006668 ORTHO05D008252 8.6e-29 132.5 493 30.6
HanXRQChr17g0555041 Helianthus annuus HOM05D006668 ORTHO05D008252 4.3e-28 130.2 240 40.0
EL10Ac9g20828 Beta vulgaris HOM05D006668 ORTHO05D008252 5.6e-28 129.8 538 28.6
Dinv06849 Davidia involucrata HOM05D006668 ORTHO05D008252 1.2e-27 128.6 337 36.8
Nitab4.5_0006091g0020 Nicotiana tabacum HOM05D006668 ORTHO05D008252 1.6e-27 128.3 507 30.2
Nitab4.5_0000621g0040 Nicotiana tabacum HOM05D006668 ORTHO05D008252 2.3e-26 124.4 509 28.7
AT5G44150 Arabidopsis thaliana HOM05D006668 ORTHO05D008252 4.0e-26 123.6 288 35.1
Haze_13261 Corylus avellana HOM05D006668 ORTHO05D008252 1.5e-25 121.7 184 45.7
Zm00001eb295870 Zea mays HOM05D006668 ORTHO05D008252 2.6e-25 120.9 416 30.3
Lsat_1_v5_gn_8_69500 Lactuca sativa HOM05D006668 ORTHO05D008252 3.4e-25 120.6 271 36.9
Duzib248G1400 Durio zibethinus HOM05D006668 ORTHO05D008252 5.8e-25 119.8 356 32.9
Oeu016899.1 Olea europaea HOM05D006668 ORTHO05D008252 2.9e-24 117.5 333 35.1
Sed0015399 Sechium edule HOM05D006668 ORTHO05D008252 3.7e-24 117.1 477 29.6
Os05g0564000 Oryza sativa ssp. japonica HOM05D006668 ORTHO05D008252 1.6e-22 111.7 209 38.8
Sabra07G0109400 Salix brachista HOM05D006668 ORTHO05D008252 1.0e-21 109.0 72 75.0
HPP92_023281 Vanilla planifolia HOM05D006668 ORTHO05D008252 1.3e-21 108.6 521 27.6
Haze_13262 Corylus avellana HOM05D006668 ORTHO05D008252 1.8e-18 98.2 296 35.8
BcaC04g21859 Brassica carinata HOM05D006668 ORTHO05D008252 3.1e-18 97.4 193 40.4
SEGI_30235 Sequoiadendron giganteum HOM05D006668 ORTHO05D008252 4.4e-17 93.6 330 30.6
ATR0602G055 Amborella trichopoda HOM05D006668 ORTHO05D008252 1.2e-14 85.5 218 33.5
CSS0030364 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 4.4e-09 67.0 145 40.0
CSS0015867 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 5.8e-09 66.6 145 39.3
CSS0037366 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 1.1e-07 62.4 238 31.1
RcHm_v2.0_Chr7g0225321 Rosa chinensis HOM05D006668 ORTHO05D008252 7.1e-07 59.7 151 35.8
ATR0602G285 Amborella trichopoda HOM05D006668 ORTHO05D008252 2.1e-06 58.2 105 40.0
CSS0027561 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 4.6e-06 57.0 237 30.0


User provided reference genes

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