Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.017G008901 Populus trichocarpa HOM05D000072 ORTHO05D000026 7.3e-115 417.2 198 100.0
Potri.017G009400 Populus trichocarpa HOM05D000072 ORTHO05D000026 1.1e-70 270.4 190 72.6
Potri.017G009100 Populus trichocarpa HOM05D000072 ORTHO05D000026 9.6e-67 257.3 190 70.5
Potri.017G008800 Populus trichocarpa HOM05D000072 ORTHO05D000026 2.3e-60 236.1 187 67.9
Potri.017G007900 Populus trichocarpa HOM05D000072 ORTHO05D000026 4.8e-58 228.4 188 66.0
Potri.017G008600 Populus trichocarpa HOM05D000072 ORTHO05D000026 3.7e-42 175.6 134 70.9
Potri.017G009600 Populus trichocarpa HOM05D000072 ORTHO05D000026 7.4e-35 151.4 136 58.1
Potri.017G009500 Populus trichocarpa HOM05D000072 ORTHO05D000026 4.5e-32 142.1 150 50.7
Potri.007G117050 Populus trichocarpa HOM05D000072 ORTHO05D000026 7.5e-27 124.8 203 40.4
Potri.007G141125 Populus trichocarpa HOM05D000072 ORTHO05D000026 4.7e-21 105.5 209 37.3
Potri.007G141450 Populus trichocarpa HOM05D000072 ORTHO05D000026 1.7e-18 97.1 223 34.5
Manes.04G075400 Manihot esculenta HOM05D000072 ORTHO05D000026 1.6e-13 80.5 139 38.1
Sabra17G0021900 Salix brachista HOM05D000072 ORTHO05D000026 7.0e-09 65.1 112 33.9
Sabra17G0022400 Salix brachista HOM05D000072 ORTHO05D000026 3.5e-08 62.8 100 38.0
RcHm_v2.0_Chr1g0328371 Rosa chinensis HOM05D000072 ORTHO05D000026 4.5e-08 62.4 129 31.8
FvH4_7g04170 Fragaria vesca HOM05D000072 ORTHO05D000026 5.9e-08 62.0 106 33.0
MD02G1274000 Malus domestica HOM05D000072 ORTHO05D000026 1.7e-07 60.5 134 32.8
MSTRG.8670 Avicennia marina HOM05D000072 ORTHO05D000026 2.3e-07 60.1 110 34.5
Cc02_g01730 Coffea canephora HOM05D000072 ORTHO05D000026 2.3e-07 60.1 109 33.9
FvH4_7g04160 Fragaria vesca HOM05D000072 ORTHO05D000026 2.3e-07 60.1 162 27.2
Prupe.2G048700 Prunus persica HOM05D000072 ORTHO05D000026 3.8e-07 59.3 108 38.0
Prupe.2G047500 Prunus persica HOM05D000072 ORTHO05D000026 6.6e-07 58.5 88 35.2
Sabra07G0101600 Salix brachista HOM05D000072 ORTHO05D000026 6.6e-07 58.5 83 38.6
FAN03G1257 Fragaria x ananassa HOM05D000072 ORTHO05D000026 8.6e-07 58.2 115 31.3
RcHm_v2.0_Chr1g0328281 Rosa chinensis HOM05D000072 ORTHO05D000026 8.6e-07 58.2 95 33.7
QL12p039529 Quercus lobata HOM05D000072 ORTHO05D000026 1.1e-06 57.8 91 41.8
Sabra07G0101900 Salix brachista HOM05D000072 ORTHO05D000026 1.1e-06 57.8 115 33.9
Manes.11G116800 Manihot esculenta HOM05D000072 ORTHO05D000026 1.5e-06 57.4 172 26.2
Medtr1g027440 Medicago truncatula HOM05D000072 ORTHO05D000026 1.5e-06 57.4 105 30.5
Sabra07G0101400 Salix brachista HOM05D000072 ORTHO05D000026 1.5e-06 57.4 112 33.0
MD02G1273500 Malus domestica HOM05D000072 ORTHO05D000026 1.9e-06 57.0 91 36.3
Sabra07G0101500 Salix brachista HOM05D000072 ORTHO05D000026 1.9e-06 57.0 81 38.3
FAN10G3322 Fragaria x ananassa HOM05D000072 ORTHO05D000026 2.5e-06 56.6 95 35.8
Manes.06G158900 Manihot esculenta HOM05D000072 ORTHO05D000026 2.5e-06 56.6 89 37.1
FvH4_7g04150 Fragaria vesca HOM05D000072 ORTHO05D000026 3.3e-06 56.2 115 32.2
Sabra17G0021500 Salix brachista HOM05D000072 ORTHO05D000026 3.3e-06 56.2 87 33.3
arahy.Tifrunner.gnm1.ann1.CYE9F3 Arachis hypogaea HOM05D000072 ORTHO05D000026 4.3e-06 55.8 135 26.7
arahy.Tifrunner.gnm1.ann1.H4EH7V Arachis hypogaea HOM05D000072 ORTHO05D000026 4.3e-06 55.8 135 26.7
RcHm_v2.0_Chr1g0333481 Rosa chinensis HOM05D000072 ORTHO05D000026 4.3e-06 55.8 148 28.4
Sabra07G0101000 Salix brachista HOM05D005069 ORTHO05D006024 4.3e-06 55.8 88 35.2
Cfa021379 Carpinus fangiana HOM05D000072 ORTHO05D000026 5.6e-06 55.5 109 37.6
QL09p009937 Quercus lobata HOM05D000072 ORTHO05D000026 5.6e-06 55.5 100 39.0
RcHm_v2.0_Chr1g0328591 Rosa chinensis HOM05D000072 ORTHO05D000026 5.6e-06 55.5 77 35.1
Potri.015G018600 Populus trichocarpa HOM05D000072 ORTHO05D000026 7.3e-06 55.1 91 39.6


User provided reference genes

Program Settings