Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.017G002100 Populus trichocarpa HOM05D007257 ORTHO05D008924 3.2e-53 211.5 104 100.0
Sabra07G0115500 Salix brachista HOM05D007257 ORTHO05D008924 8.4e-38 160.2 104 77.9
Potri.007G145500 Populus trichocarpa HOM05D007257 ORTHO05D008924 1.6e-36 156.0 104 76.9
Sabra17G0006100 Salix brachista HOM05D007257 ORTHO05D008924 2.7e-36 155.2 89 86.5
Manes.01G009800 Manihot esculenta HOM05D007257 ORTHO05D008924 3.3e-18 95.1 104 55.8
Glyma.05G198900 Glycine max HOM05D007257 ORTHO05D008924 1.5e-15 86.3 117 47.0
Lalb_Chr11g0068971 Lupinus albus HOM05D007257 ORTHO05D008924 7.7e-15 84.0 105 49.5
Glyma.04G203100 Glycine max HOM05D007257 ORTHO05D008924 1.7e-14 82.8 109 45.9
QL10p064610 Quercus lobata HOM05D007257 ORTHO05D008924 2.2e-14 82.4 108 46.3
QL10p065732 Quercus lobata HOM05D007257 ORTHO05D008924 2.2e-14 82.4 108 46.3
Glyma.06G162400 Glycine max HOM05D007257 ORTHO05D008924 8.5e-14 80.5 110 45.5
Atru.chr3.1975 Acer truncatum HOM05D007257 ORTHO05D008924 1.9e-13 79.3 103 47.6
Lj1g0006483 Lotus japonicus HOM05D007257 ORTHO05D008924 2.5e-13 79.0 105 45.7
Manes.05G207200 Manihot esculenta HOM05D007257 ORTHO05D008924 4.2e-13 78.2 103 46.6
Migut.N03023 Erythranthe guttata HOM05D007257 ORTHO05D008924 1.2e-12 76.6 105 45.7
COL.COLO4_14410 Corchorus olitorius HOM05D007257 ORTHO05D008924 3.6e-12 75.1 109 43.1
Gohir.A09G196300 Gossypium hirsutum HOM05D007257 ORTHO05D008924 1.0e-11 73.6 103 45.6
Phvul.009G159100 Phaseolus vulgaris HOM05D007257 ORTHO05D008924 1.4e-11 73.2 110 44.5
Gohir.D09G190900 Gossypium hirsutum HOM05D007257 ORTHO05D008924 1.8e-11 72.8 103 46.6
Gorai.006G213700 Gossypium raimondii HOM05D007257 ORTHO05D008924 1.8e-11 72.8 103 46.6
Thecc.05G001300 Theobroma cacao HOM05D007257 ORTHO05D008924 1.8e-11 72.8 108 43.5
Dinv33249 Davidia involucrata HOM05D008933 ORTHO05D011098 3.0e-11 72.0 82 51.2
Ciclev10022922m.g Citrus clementina HOM05D007257 ORTHO05D008924 3.9e-11 71.6 113 43.4
TWI15G0669 Tripterygium wilfordii HOM05D007257 ORTHO05D008924 3.9e-11 71.6 111 45.0
Migut.G00917 Erythranthe guttata HOM05D007257 ORTHO05D008924 5.1e-11 71.2 103 42.7
vmacro00725 Vaccinium macrocarpon HOM05D007257 ORTHO05D008924 6.7e-11 70.9 116 42.2
Phvul.002G279900 Phaseolus vulgaris HOM05D007257 ORTHO05D008924 1.1e-10 70.1 112 42.0
PGSC0003DMG400029271 Solanum tuberosum HOM05D007257 ORTHO05D008924 1.1e-10 70.1 111 40.5
Sopen12g032450 Solanum pennellii HOM05D007257 ORTHO05D008924 1.5e-10 69.7 111 40.5
Rhsim09G0003000 Rhododendron simsii HOM05D007257 ORTHO05D008924 2.0e-10 69.3 107 42.1
Medtr3g098390 Medicago truncatula HOM05D007257 ORTHO05D008924 2.5e-10 68.9 103 42.7
TPR.G7792 Trifolium pratense HOM05D007257 ORTHO05D008924 3.3e-10 68.6 103 43.7
Peaxi162Scf00169g00094 Petunia axillaris HOM05D007257 ORTHO05D008924 5.7e-10 67.8 116 38.8
CiPaw.01G202100 Carya illinoinensis HOM05D007257 ORTHO05D008924 7.4e-10 67.4 109 39.4
SGA_v2.0_scaffold25G11017 Striga asiatica HOM05D007257 ORTHO05D008924 9.7e-10 67.0 104 39.4
Actinidia18394 Actinidia chinensis HOM05D008933 ORTHO05D011098 1.3e-09 66.6 78 46.2
CiPaw.02G125200 Carya illinoinensis HOM05D007257 ORTHO05D008924 1.3e-09 66.6 84 45.2
Lalb_Chr12g0202631 Lupinus albus HOM05D007257 ORTHO05D008924 1.3e-09 66.6 108 40.7
Nitab4.5_0000160g0050 Nicotiana tabacum HOM05D007257 ORTHO05D008924 1.3e-09 66.6 103 41.7
Nitab4.5_0001110g0010 Nicotiana tabacum HOM05D007257 ORTHO05D008924 1.7e-09 66.2 110 43.6
THA.LOC104827561 Tarenaya hassleriana HOM05D007257 ORTHO05D008924 2.2e-09 65.9 110 40.9
EL10Ac3g06173 Beta vulgaris HOM05D007257 ORTHO05D008924 3.7e-09 65.1 122 34.4
Rhsim09G0003300 Rhododendron simsii HOM05D007257 ORTHO05D008924 3.7e-09 65.1 104 40.4
Nn1g09433 Nelumbo nucifera HOM05D007257 ORTHO05D008924 6.3e-09 64.3 108 42.6
Dinv24749 Davidia involucrata HOM05D007257 ORTHO05D008924 1.1e-08 63.5 100 42.0
PGR042G0806 Punica granatum HOM05D007257 ORTHO05D008924 1.1e-08 63.5 119 40.3
ClCG06G009780 Citrullus lanatus HOM05D007257 ORTHO05D008924 1.4e-08 63.2 116 38.8
Eucgr.A00421 Eucalyptus grandis HOM05D007257 ORTHO05D008924 1.4e-08 63.2 107 31.8
TAR365G0873 Trochodendron aralioides HOM05D007257 ORTHO05D008924 2.4e-08 62.4 80 45.0
Haze_11125 Corylus avellana HOM05D007257 ORTHO05D008924 3.1e-08 62.0 110 43.6
Glyma.08G006200 Glycine max HOM05D007257 ORTHO05D008924 4.1e-08 61.6 119 38.7
SalBow3G3102 Salvia bowleyana HOM05D007257 ORTHO05D008924 4.1e-08 61.6 116 39.7
Psat5g055880 Pisum sativum HOM05D007257 ORTHO05D008924 5.3e-08 61.2 107 43.0
Sc13g0007600 Simmondsia chinensis HOM05D007257 ORTHO05D008924 9.1e-08 60.5 110 37.3
Oeu018062.1 Olea europaea HOM05D007257 ORTHO05D008924 1.2e-07 60.1 115 36.5
Nn7g37449 Nelumbo nucifera HOM05D007257 ORTHO05D008924 2.6e-07 58.9 107 41.1
Sed0023616 Sechium edule HOM05D007257 ORTHO05D008924 2.6e-07 58.9 110 38.2
Peaxi162Scf00057g00224 Petunia axillaris HOM05D007257 ORTHO05D008924 3.4e-07 58.5 103 36.9
Ah.07g203290 Amaranthus hybridus HOM05D007257 ORTHO05D008924 4.5e-07 58.2 38 63.2
AL5G42000 Arabidopsis lyrata HOM05D007257 ORTHO05D008924 5.9e-07 57.8 120 42.5
Cfa008520 Carpinus fangiana HOM05D007257 ORTHO05D008924 1.0e-06 57.0 107 41.1
TPR.G12885 Trifolium pratense HOM05D033974 ORTHO05D008924 1.7e-06 56.2 96 40.6
Hma1.2p1_1782F.1_g302120 Hydrangea macrophylla HOM05D007257 ORTHO05D008924 2.2e-06 55.8 40 65.0
Medtr8g095560 Medicago truncatula HOM05D033974 ORTHO05D008924 2.2e-06 55.8 109 38.5
CsaV3_2G011240 Cucumis sativus L. HOM05D007257 ORTHO05D008924 2.9e-06 55.5 119 35.3
Aa31LG1G25680 Aethionema arabicum HOM05D007257 ORTHO05D008924 3.8e-06 55.1 110 36.4
AT3G59880 Arabidopsis thaliana HOM05D007257 ORTHO05D008924 3.8e-06 55.1 124 37.9
Solyc12g017960.1 Solanum lycopersicum HOM05D007257 ORTHO05D008924 5.0e-06 54.7 103 35.0
Carub.0005s2662 Capsella rubella HOM05D007257 ORTHO05D008924 6.5e-06 54.3 114 36.8
CARHR170210 Cardamine hirsuta HOM05D007257 ORTHO05D008924 6.5e-06 54.3 111 34.2
Sopen12g009180 Solanum pennellii HOM05D007257 ORTHO05D008924 6.5e-06 54.3 103 35.9


User provided reference genes

Program Settings