Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.016G134700 Populus trichocarpa HOM05D006727 ORTHO05D008408 7.1e-127 457.2 222 100.0
Sabra04G0152100 Salix brachista HOM05D006727 ORTHO05D008408 2.6e-113 412.1 243 84.4
Manes.09G116800 Manihot esculenta HOM05D006727 ORTHO05D008408 5.1e-109 397.9 223 84.3
Dinv11373 Davidia involucrata HOM05D006727 ORTHO05D008408 1.1e-106 390.2 222 82.4
Thecc.04G153700 Theobroma cacao HOM05D006727 ORTHO05D008408 7.6e-105 384.0 211 85.3
Cfa017053 Carpinus fangiana HOM05D006727 ORTHO05D008408 1.3e-104 383.3 221 82.4
Gohir.A10G149900 Gossypium hirsutum HOM05D006727 ORTHO05D008408 1.7e-104 382.9 209 85.2
Dinv25328 Davidia involucrata HOM05D006727 ORTHO05D008408 5.0e-104 381.3 214 84.6
Gorai.011G128700 Gossypium raimondii HOM05D006727 ORTHO05D008408 6.5e-104 380.9 207 85.5
Duzib212G0227 Durio zibethinus HOM05D006727 ORTHO05D008408 1.9e-103 379.4 207 85.5
CSS0002185 Camellia sinensis var. sinensis HOM05D006727 ORTHO05D008408 3.2e-103 378.6 222 81.5
Gohir.D10G116900 Gossypium hirsutum HOM05D006727 ORTHO05D008408 3.2e-103 378.6 207 85.0
CSS0012941 Camellia sinensis var. sinensis HOM05D006727 ORTHO05D008408 2.1e-102 375.9 222 80.6
MD12G1186200 Malus domestica HOM05D006727 ORTHO05D008408 2.1e-102 375.9 223 79.8
Atru.chr8.2386 Acer truncatum HOM05D006727 ORTHO05D008408 2.7e-102 375.6 224 79.5
QL07p032522 Quercus lobata HOM05D006727 ORTHO05D008408 3.5e-102 375.2 210 81.4
Prupe.6G291700 Prunus persica HOM05D006727 ORTHO05D008408 4.6e-102 374.8 225 80.4
COL.COLO4_16540 Corchorus olitorius HOM05D006727 ORTHO05D008408 7.9e-102 374.0 204 84.8
TAR220G0001 Trochodendron aralioides HOM05D006727 ORTHO05D008408 2.3e-101 372.5 214 81.8
PGR004G2541 Punica granatum HOM05D006727 ORTHO05D008408 3.9e-101 371.7 207 81.2
TWI53G1665 Tripterygium wilfordii HOM05D006727 ORTHO05D008408 3.9e-101 371.7 207 83.6
Aqoxy4G02378 Aquilegia oxysepala HOM05D006727 ORTHO05D008408 5.1e-101 371.3 223 78.9
MD04G1172900 Malus domestica HOM05D006727 ORTHO05D008408 5.1e-101 371.3 224 77.7
GSVIVG01030200001 Vitis vinifera HOM05D006727 ORTHO05D008408 1.1e-100 370.2 219 78.5
CiPaw.09G219900 Carya illinoinensis HOM05D006727 ORTHO05D008408 2.5e-100 369.0 219 79.0
FAN02G0358 Fragaria x ananassa HOM05D006727 ORTHO05D008408 2.5e-100 369.0 205 83.4
FAN14G1566 Fragaria x ananassa HOM05D006727 ORTHO05D008408 2.5e-100 369.0 206 83.0
Nitab4.5_0000950g0010 Nicotiana tabacum HOM05D006727 ORTHO05D008408 2.2e-99 365.9 211 80.6
FvH4_6g10100 Fragaria vesca HOM05D006727 ORTHO05D008408 2.8e-99 365.5 206 82.5
MELO3C009112.2 Cucumis melo HOM05D006727 ORTHO05D008408 8.2e-99 364.0 214 80.4
Hund03725 Selenicereus undatus HOM05D006727 ORTHO05D008408 1.4e-98 363.2 222 74.3
CsaV3_3G033190 Cucumis sativus L. HOM05D006727 ORTHO05D008408 2.4e-98 362.5 217 78.3
RcHm_v2.0_Chr3g0460801 Rosa chinensis HOM05D006727 ORTHO05D008408 3.1e-98 362.1 206 81.1
Lalb_Chr19g0124021 Lupinus albus HOM05D006727 ORTHO05D008408 5.3e-98 361.3 213 78.4
Peaxi162Scf00732g00434 Petunia axillaris HOM05D006727 ORTHO05D008408 6.9e-98 360.9 211 79.1
CANSAT35G0523 Cannabis sativa HOM05D006727 ORTHO05D008408 9.0e-98 360.5 223 74.9
FAN05G4632 Fragaria x ananassa HOM05D006727 ORTHO05D008408 9.0e-98 360.5 205 82.0
HanXRQChr01g0000191 Helianthus annuus HOM05D006727 ORTHO05D008408 9.0e-98 360.5 207 81.6
THA.LOC104823356 Tarenaya hassleriana HOM05D006727 ORTHO05D008408 9.0e-98 360.5 205 81.5
Ciclev10012697m.g Citrus clementina HOM05D006727 ORTHO05D008408 1.2e-97 360.1 222 74.8
Lj1g0012647 Lotus japonicus HOM05D006727 ORTHO05D008408 1.2e-97 360.1 207 79.2
FAN05G1856 Fragaria x ananassa HOM05D006727 ORTHO05D008408 1.5e-97 359.8 205 82.0
Medtr7g072680 Medicago truncatula HOM05D006727 ORTHO05D008408 4.5e-97 358.2 205 81.5
Migut.J00054 Erythranthe guttata HOM05D006727 ORTHO05D008408 5.9e-97 357.8 214 78.0
Glyma.18G215000 Glycine max HOM05D006727 ORTHO05D008408 5.9e-97 357.8 211 79.1
PSO017G7044 Papaver somniferum HOM05D006727 ORTHO05D008408 5.9e-97 357.8 208 77.9
Sed0012883 Sechium edule HOM05D006727 ORTHO05D008408 7.7e-97 357.5 214 78.0
arahy.Tifrunner.gnm1.ann1.SP3HKJ Arachis hypogaea HOM05D006727 ORTHO05D008408 1.3e-96 356.7 212 77.8
arahy.Tifrunner.gnm1.ann1.U8U4T8 Arachis hypogaea HOM05D006727 ORTHO05D008408 1.7e-96 356.3 212 77.4
Lsat_1_v5_gn_5_150061 Lactuca sativa HOM05D006727 ORTHO05D008408 1.7e-96 356.3 198 82.8
ECA248G2137 Erigeron canadensis HOM05D006727 ORTHO05D008408 2.2e-96 355.9 198 83.8
Sc19g0002650 Simmondsia chinensis HOM05D006727 ORTHO05D008408 2.2e-96 355.9 213 75.1
Phvul.008G083900 Phaseolus vulgaris HOM05D006727 ORTHO05D008408 2.9e-96 355.5 211 79.1
SGA_v2.0_scaffold373G50173 Striga asiatica HOM05D006727 ORTHO05D008408 3.8e-96 355.1 225 76.4
Rhsim05G0229700 Rhododendron simsii HOM05D006727 ORTHO05D008408 6.5e-96 354.4 216 77.8
TPR.G26930 Trifolium pratense HOM05D006727 ORTHO05D008408 8.5e-96 354.0 205 79.5
Cc06_g00470 Coffea canephora HOM05D006727 ORTHO05D008408 4.2e-95 351.7 200 80.5
Glyma.09G276200 Glycine max HOM05D006727 ORTHO05D008408 4.2e-95 351.7 212 77.4
MSTRG.18948 Avicennia marina HOM05D006727 ORTHO05D008408 2.1e-94 349.4 225 74.2
Psat3g120440 Pisum sativum HOM05D006727 ORTHO05D008408 2.1e-94 349.4 211 75.8
EL10Ac7g17073 Beta vulgaris HOM05D006727 ORTHO05D008408 1.1e-92 343.6 208 76.0
Eucgr.K01278 Eucalyptus grandis HOM05D006727 ORTHO05D008408 4.3e-92 341.7 204 76.0
HPP92_001138 Vanilla planifolia HOM05D006727 ORTHO05D008408 7.4e-92 340.9 217 73.3
Aa31sc296G30 Aethionema arabicum HOM05D006727 ORTHO05D008408 9.7e-92 340.5 211 76.3
BcaNung00375 Brassica carinata HOM05D006727 ORTHO05D008408 4.8e-91 338.2 217 74.7
CARHR161200 Cardamine hirsuta HOM05D006727 ORTHO05D008408 1.4e-90 336.7 217 74.7
C01p28960 Brassica napus HOM05D006727 ORTHO05D008408 6.9e-90 334.3 217 74.2
Thhalv10010694m.g Eutrema salsugineum HOM05D006727 ORTHO05D008408 6.9e-90 334.3 214 74.8
BolC1t02827H Brassica oleracea HOM05D006727 ORTHO05D008408 9.1e-90 334.0 217 74.2
BcaC09g50100 Brassica carinata HOM05D006727 ORTHO05D008408 1.2e-89 333.6 217 74.2
AL5G32050 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 2.6e-89 332.4 203 76.4
AT3G51610 Arabidopsis thaliana HOM05D006727 ORTHO05D008408 4.5e-89 331.6 203 76.8
Zm00001eb281990 Zea mays HOM05D006727 ORTHO05D008408 7.7e-89 330.9 205 72.2
A01p23320 Brassica napus HOM05D006727 ORTHO05D008408 1.0e-88 330.5 220 72.7
BraA01t02241Z Brassica rapa HOM05D006727 ORTHO05D008408 1.0e-88 330.5 220 72.7
Carub.0005s1797 Capsella rubella HOM05D006727 ORTHO05D008408 1.0e-88 330.5 210 77.1
ATR0681G348 Amborella trichopoda HOM05D006727 ORTHO05D008408 3.2e-87 325.5 205 73.7
Haze_21159 Corylus avellana HOM05D006727 ORTHO05D008408 5.5e-87 324.7 178 84.8
Os05g0168400 Oryza sativa ssp. japonica HOM05D006727 ORTHO05D008408 1.8e-85 319.7 208 69.7
Oeu026955.4 Olea europaea HOM05D006727 ORTHO05D008408 7.4e-84 314.3 267 59.9
vmacro20362 Vaccinium macrocarpon HOM05D006727 ORTHO05D008408 1.3e-83 313.5 211 71.6
PSO170G4157 Papaver somniferum HOM05D006727 ORTHO05D008408 1.4e-82 310.1 178 78.7
CDE04G1801 Ceratophyllum demersum HOM05D006727 ORTHO05D008408 3.1e-82 308.9 177 75.7
Ah.15g090120 Amaranthus hybridus HOM05D006727 ORTHO05D008408 1.3e-80 303.5 221 67.0
Nn2g10333 Nelumbo nucifera HOM05D006727 ORTHO05D008408 2.5e-79 299.3 173 76.3
Sp5g10660 Schrenkiella parvula HOM05D006727 ORTHO05D008408 2.0e-76 289.7 180 75.6
unitig_749.g14090 Utricularia gibba HOM05D006727 ORTHO05D008408 9.7e-76 287.3 188 70.7
TAR623G1271 Trochodendron aralioides HOM05D006727 ORTHO05D008408 2.4e-74 282.7 222 65.8
CAN.G119.2 Capsicum annuum HOM05D006727 ORTHO05D008408 3.0e-69 265.8 149 80.5
FAN09G3050 Fragaria x ananassa HOM05D006727 ORTHO05D008408 5.2e-69 265.0 151 78.8
ClCG10G022640 Citrullus lanatus HOM05D006727 ORTHO05D008408 2.6e-68 262.7 214 65.9
Mapoly0003s0079 Marchantia polymorpha HOM05D006727 ORTHO05D008408 8.3e-67 257.7 198 57.6
SMO356G0277 Selaginella moellendorffii HOM05D006727 ORTHO05D008408 3.6e-62 242.3 176 58.0
AUR62006372 Chenopodium quinoa HOM05D006727 ORTHO05D008408 8.0e-62 241.1 213 56.8
Nitab4.5_0000330g0040 Nicotiana tabacum HOM05D006727 ORTHO05D008408 1.3e-59 233.8 140 78.6
Pp3c2_32200 Physcomitrium patens HOM05D006727 ORTHO05D008408 9.2e-58 227.6 200 53.5
Actinidia20787 Actinidia chinensis HOM05D006727 ORTHO05D008408 2.9e-56 222.6 127 80.3
Ca_07756_v3 Cicer arietinum L. HOM05D006727 ORTHO05D008408 2.0e-52 209.9 126 73.0
SHI12925 Sapria himalayana HOM05D006727 ORTHO05D008408 1.3e-48 197.2 129 69.0
Sopen03g037430 Solanum pennellii HOM05D006727 ORTHO05D008408 5.2e-45 185.3 115 76.5
Oeu060435.2 Olea europaea HOM05D006727 ORTHO05D008408 3.7e-43 179.1 98 80.6
AagrBONN_evm.TU.Sc2ySwM_344.2624 Anthoceros agrestis HOM05D006727 ORTHO05D008408 2.7e-41 172.9 137 54.7
Cre01.g049450 Chlamydomonas reinhardtii HOM05D006727 ORTHO05D008408 7.5e-36 154.8 207 37.2
BraA09t39934Z Brassica rapa HOM05D006727 ORTHO05D008408 3.0e-32 142.9 128 59.4
PRCOL_00001207 Prasinoderma coloniale HOM05D006727 ORTHO05D008408 8.6e-32 141.4 196 32.7
A09p44730 Brassica napus HOM05D006727 ORTHO05D008408 2.5e-31 139.8 128 57.0
Solyc03g118520.4 Solanum lycopersicum HOM05D006727 ORTHO05D008408 8.9e-29 131.3 76 77.6
MCO09G625 Micromonas commoda HOM05D006727 ORTHO05D008408 9.9e-28 127.9 153 34.0
Sopen03g037400 Solanum pennellii HOM05D006727 ORTHO05D008408 9.9e-28 127.9 71 80.3
AagrBONN_evm.TU.Sc2ySwM_344.2622 Anthoceros agrestis HOM05D006727 ORTHO05D008408 1.3e-27 127.5 89 60.7
PSO017G2966 Papaver somniferum HOM05D004863 ORTHO05D005802 1.1e-26 124.4 66 78.8
AL1G25050 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 9.6e-23 111.3 67 76.1
SEGI_08771 Sequoiadendron giganteum HOM05D006727 ORTHO05D008408 6.9e-21 105.1 58 72.4
AL8G15680 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 8.9e-21 104.8 51 90.2
BolC8t50296H Brassica oleracea HOM05D006727 ORTHO05D008408 9.6e-15 84.7 71 57.7
Carub.0007s3202 Capsella rubella HOM05D006727 ORTHO05D008408 6.9e-13 78.6 58 75.9
MD12G1088300 Malus domestica HOM05D006727 ORTHO05D008408 2.2e-11 73.6 47 68.1
BcaB01g00436 Brassica carinata HOM05D006727 ORTHO05D008408 4.8e-06 55.8 73 47.9


User provided reference genes

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