Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.016G123700 Populus trichocarpa HOM05D007653 ORTHO05D009670 2.8e-163 578.6 295 100.0
Sabra16G0118500 Salix brachista HOM05D007653 ORTHO05D009670 2.2e-128 462.6 295 79.7
Manes.09G109500 Manihot esculenta HOM05D007653 ORTHO05D009670 2.1e-78 296.6 288 57.6
TWI74G0740 Tripterygium wilfordii HOM05D007653 ORTHO05D009670 5.8e-60 235.3 255 52.9
Cfa017149 Carpinus fangiana HOM05D007653 ORTHO05D009670 5.5e-58 228.8 287 49.5
Thecc.05G009700 Theobroma cacao HOM05D007653 ORTHO05D009670 6.0e-57 225.3 297 47.5
QL07p034260 Quercus lobata HOM05D007653 ORTHO05D009670 7.9e-57 224.9 278 49.6
Lj3g0004323 Lotus japonicus HOM05D007653 ORTHO05D009670 3.7e-54 216.1 290 45.9
CiPaw.10G159500 Carya illinoinensis HOM05D007653 ORTHO05D009670 1.1e-53 214.5 268 47.8
Gohir.D01G218900 Gossypium hirsutum HOM05D007653 ORTHO05D009670 2.0e-52 210.3 268 48.1
Gorai.002G265600 Gossypium raimondii HOM05D007653 ORTHO05D009670 2.0e-52 210.3 268 48.1
Duzib093G1250 Durio zibethinus HOM05D007653 ORTHO05D009670 2.2e-51 206.8 292 48.6
Gohir.A01G229000 Gossypium hirsutum HOM05D007653 ORTHO05D009670 4.9e-51 205.7 268 47.4
Dinv08443 Davidia involucrata HOM05D007653 ORTHO05D009670 9.3e-50 201.4 273 48.7
Atru.chr8.2298 Acer truncatum HOM05D007653 ORTHO05D009670 1.1e-47 194.5 293 47.8
Phvul.010G060900 Phaseolus vulgaris HOM05D007653 ORTHO05D009670 1.9e-47 193.7 285 42.5
Glyma.01G124000 Glycine max HOM05D007653 ORTHO05D009670 1.6e-46 190.7 273 44.0
Glyma.03G051200 Glycine max HOM05D007653 ORTHO05D009670 2.8e-46 189.9 269 44.2
TAR369G0435 Trochodendron aralioides HOM05D007653 ORTHO05D009670 3.1e-45 186.4 270 43.0
COL.COLO4_14486 Corchorus olitorius HOM05D007653 ORTHO05D009670 9.0e-45 184.9 289 48.8
VMungo0331G0216 Vigna mungo HOM05D007653 ORTHO05D009670 2.6e-44 183.3 269 42.4
Lalb_Chr12g0207101 Lupinus albus HOM05D007653 ORTHO05D009670 5.9e-44 182.2 286 42.0
Ciclev10012426m.g Citrus clementina HOM05D007653 ORTHO05D009670 8.5e-43 178.3 276 41.3
Glyma.07G154000 Glycine max HOM05D007653 ORTHO05D009670 3.2e-42 176.4 295 44.1
Prupe.6G282500 Prunus persica HOM05D007653 ORTHO05D009670 4.2e-42 176.0 268 47.8
Actinidia20753 Actinidia chinensis HOM05D007653 ORTHO05D009670 1.2e-41 174.5 285 40.4
MD04G1163000 Malus domestica HOM05D007653 ORTHO05D009670 1.6e-41 174.1 273 44.7
Medtr7g069710 Medicago truncatula HOM05D007653 ORTHO05D009670 6.1e-41 172.2 267 44.9
Cpa.g.sc120.35 Carica papaya HOM05D007653 ORTHO05D009670 3.0e-40 169.9 254 48.4
FAN05G3332 Fragaria x ananassa HOM05D007653 ORTHO05D009670 6.7e-40 168.7 293 45.1
TPR.G21326 Trifolium pratense HOM05D007653 ORTHO05D009670 1.5e-39 167.5 285 41.4
Ca_07676_v3 Cicer arietinum L. HOM05D007653 ORTHO05D009670 1.4e-37 161.0 283 39.9
VMungo1383G1231 Vigna mungo HOM05D007653 ORTHO05D009670 1.4e-37 161.0 273 41.0
FAN14G3858 Fragaria x ananassa HOM05D001497 ORTHO05D001619 1.8e-37 160.6 268 44.4
Lalb_Chr01g0023261 Lupinus albus HOM05D007653 ORTHO05D009670 1.8e-37 160.6 322 37.9
RcHm_v2.0_Chr3g0462281 Rosa chinensis HOM05D007653 ORTHO05D009670 5.3e-37 159.1 278 42.8
ClCG04G006820 Citrullus lanatus HOM05D007653 ORTHO05D009670 2.1e-33 147.1 279 36.9
MELO3C026011.2 Cucumis melo HOM05D007653 ORTHO05D009670 3.6e-33 146.4 291 38.1
Sed0001003 Sechium edule HOM05D007653 ORTHO05D009670 4.7e-33 146.0 295 36.9
Haze_21051 Corylus avellana HOM05D007653 ORTHO05D009670 1.4e-32 144.4 282 35.1
Medtr4g014670 Medicago truncatula HOM05D007653 ORTHO05D009670 3.0e-32 143.3 296 36.5
DCAR_028874 Daucus carota HOM05D007653 ORTHO05D009670 5.1e-32 142.5 264 36.4
CsaV3_4G026460 Cucumis sativus L. HOM05D007653 ORTHO05D009670 8.8e-32 141.7 292 37.7
arahy.Tifrunner.gnm1.ann1.4LI2NJ Arachis hypogaea HOM05D007653 ORTHO05D009670 7.4e-31 138.7 263 38.4
TPR.G5265 Trifolium pratense HOM05D007653 ORTHO05D009670 2.2e-30 137.1 270 37.8
Psat7g247360 Pisum sativum HOM05D007653 ORTHO05D009670 6.3e-30 135.6 291 36.4
Phvul.008G094700 Phaseolus vulgaris HOM05D001497 ORTHO05D001707 1.8e-29 134.0 259 36.3
Oeu057628.1 Olea europaea HOM05D007653 ORTHO05D009670 3.5e-28 129.8 266 36.5
ECA247G1536 Erigeron canadensis HOM05D007653 ORTHO05D009670 4.5e-28 129.4 260 38.1
Aqoxy2G00810 Aquilegia oxysepala HOM05D007653 ORTHO05D009670 2.2e-27 127.1 243 35.4
Actinidia32531 Actinidia chinensis HOM05D007653 ORTHO05D009670 5.0e-27 125.9 258 36.0
Rhsim04G0175600 Rhododendron simsii HOM05D007653 ORTHO05D009670 2.5e-26 123.6 280 33.2
AT3G51760 Arabidopsis thaliana HOM05D007653 ORTHO05D009670 5.5e-26 122.5 282 34.8
AUR62030507 Chenopodium quinoa HOM05D007653 ORTHO05D009670 7.2e-26 122.1 285 36.1
Nn2g10953 Nelumbo nucifera HOM05D007653 ORTHO05D009670 7.2e-26 122.1 267 39.0
EL10Ac5g12516 Beta vulgaris HOM05D007653 ORTHO05D009670 6.1e-25 119.0 271 34.3
Thhalv10010652m.g Eutrema salsugineum HOM05D007653 ORTHO05D009670 6.1e-25 119.0 278 34.5
Sc07g0006490 Simmondsia chinensis HOM05D007653 ORTHO05D009670 8.0e-25 118.6 277 36.8
Sp5g10510 Schrenkiella parvula HOM05D007653 ORTHO05D009670 3.0e-24 116.7 277 33.6
AL5G32220 Arabidopsis lyrata HOM05D007653 ORTHO05D009670 6.7e-24 115.5 279 34.4
Migut.L02038 Erythranthe guttata HOM05D007653 ORTHO05D009670 2.6e-23 113.6 268 35.4
BcaB01g00481 Brassica carinata HOM05D007653 ORTHO05D009670 4.4e-23 112.8 280 31.4
C08p26990 Brassica napus HOM05D007653 ORTHO05D009670 4.4e-23 112.8 280 31.4
BolC8t50316H Brassica oleracea HOM05D007653 ORTHO05D009670 4.4e-23 112.8 280 31.4
CAN.G588.49 Capsicum annuum HOM05D007653 ORTHO05D009670 7.4e-23 112.1 286 32.5
A09p44930 Brassica napus HOM05D007653 ORTHO05D009670 1.3e-22 111.3 280 31.4
BraA09t39952Z Brassica rapa HOM05D007653 ORTHO05D009670 1.3e-22 111.3 280 31.4
CARHR161390 Cardamine hirsuta HOM05D007653 ORTHO05D009670 1.3e-22 111.3 277 32.1
BcaB01g00421 Brassica carinata HOM05D007653 ORTHO05D009670 1.7e-22 110.9 274 33.2
PSO339G6297 Papaver somniferum HOM05D007653 ORTHO05D009670 1.1e-21 108.2 270 30.4
Carub.0005s1811 Capsella rubella HOM05D007653 ORTHO05D009670 1.4e-21 107.8 279 34.8
PGSC0003DMG400026639 Solanum tuberosum HOM05D007653 ORTHO05D009670 1.8e-21 107.5 280 33.9
Eucgr.K00125 Eucalyptus grandis HOM05D007653 ORTHO05D009670 1.6e-20 104.4 267 31.1
Aa31sc892G20 Aethionema arabicum HOM05D007653 ORTHO05D009670 5.9e-20 102.4 291 30.6
Lsat_1_v5_gn_9_37441 Lactuca sativa HOM05D007653 ORTHO05D009670 1.0e-19 101.7 263 33.5
Cc06_g00860 Coffea canephora HOM05D007653 ORTHO05D009670 1.7e-19 100.9 286 31.5
Ca_20332_v3 Cicer arietinum L. HOM05D007653 ORTHO05D009670 3.8e-19 99.8 231 35.1
THA.LOC104806615 Tarenaya hassleriana HOM05D007653 ORTHO05D009670 2.5e-18 97.1 282 30.5
Nitab4.5_0009553g0030 Nicotiana tabacum HOM05D007653 ORTHO05D009670 3.6e-17 93.2 251 39.0
Solyc09g005020.1 Solanum lycopersicum HOM05D007653 ORTHO05D009670 2.3e-16 90.5 286 30.4
FAN09G3847 Fragaria x ananassa HOM05D007653 ORTHO05D009670 8.8e-16 88.6 262 33.6
SGA_v2.0_scaffold110G31197 Striga asiatica HOM05D007653 ORTHO05D009670 3.4e-15 86.7 259 30.9
Nn7g37369 Nelumbo nucifera HOM05D007653 ORTHO05D009670 4.4e-15 86.3 269 33.5
Peaxi162Scf01132g00319 Petunia axillaris HOM05D007653 ORTHO05D009670 9.7e-15 85.1 207 40.6
Cc06_g00970 Coffea canephora HOM05D001108 ORTHO05D001619 2.8e-14 83.6 187 35.3
FAN02G3974 Fragaria x ananassa HOM05D007653 ORTHO05D009670 8.3e-14 82.0 123 48.8
AUR62030786 Chenopodium quinoa HOM05D007653 ORTHO05D009670 1.8e-13 80.9 231 35.1
Nn1g06127 Nelumbo nucifera HOM05D007653 ORTHO05D009670 7.2e-10 68.9 214 33.2
Ciclev10014532m.g Citrus clementina HOM05D002063 ORTHO05D002075 1.6e-09 67.8 206 32.0
QL05p047487 Quercus lobata HOM05D002063 ORTHO05D002075 3.6e-09 66.6 210 28.1
MD05G1299600 Malus domestica HOM05D002063 ORTHO05D002075 8.0e-09 65.5 206 27.7
CANSAT54G0797 Cannabis sativa HOM05D002063 ORTHO05D002075 1.8e-08 64.3 188 33.5
Aqoxy1G02039 Aquilegia oxysepala HOM05D002063 ORTHO05D002075 2.3e-08 63.9 318 26.1
COL.COLO4_31282 Corchorus olitorius HOM05D002063 ORTHO05D002075 5.2e-08 62.8 252 25.8
Nn1g04435 Nelumbo nucifera HOM05D002063 ORTHO05D002075 5.2e-08 62.8 231 28.1
Gorai.011G039100 Gossypium raimondii HOM05D002063 ORTHO05D002075 6.8e-08 62.4 212 29.2
HanXRQChr17g0564361 Helianthus annuus HOM05D002063 ORTHO05D002075 6.8e-08 62.4 213 33.8
Nn4g22427 Nelumbo nucifera HOM05D007653 ORTHO05D009670 6.8e-08 62.4 98 37.8
A08p25230 Brassica napus HOM05D002063 ORTHO05D002075 1.2e-07 61.6 214 29.4
Atru.chr10.1653 Acer truncatum HOM05D002063 ORTHO05D002075 2.0e-07 60.8 207 29.0
ClCG07G002750 Citrullus lanatus HOM05D002063 ORTHO05D002075 2.0e-07 60.8 198 29.3
Lj1A680T13 Lonicera japonica HOM05D002063 ORTHO05D002075 2.0e-07 60.8 233 29.2
Gohir.A10G036500 Gossypium hirsutum HOM05D002063 ORTHO05D002075 2.6e-07 60.5 212 28.8
Gohir.D10G037200 Gossypium hirsutum HOM05D002063 ORTHO05D002075 2.6e-07 60.5 212 29.2
Lju1655A0T37 Lonicera japonica HOM05D002063 ORTHO05D002075 3.4e-07 60.1 233 29.2
Aa31LG6G6300 Aethionema arabicum HOM05D002063 ORTHO05D002075 4.4e-07 59.7 208 30.3
Nitab4.5_0000249g0250 Nicotiana tabacum HOM05D002063 ORTHO05D002075 4.4e-07 59.7 223 26.9
Nitab4.5_0006875g0040 Nicotiana tabacum HOM05D002063 ORTHO05D002075 4.4e-07 59.7 224 27.2
Potri.014G142800 Populus trichocarpa HOM05D002063 ORTHO05D002075 5.7e-07 59.3 250 25.6
Sopen07g027090 Solanum pennellii HOM05D002063 ORTHO05D002075 7.5e-07 58.9 223 26.5
Cpa.g.sc7.77 Carica papaya HOM05D002063 ORTHO05D002075 1.3e-06 58.2 246 26.4
Nn2g12482 Nelumbo nucifera HOM05D007653 ORTHO05D009670 1.3e-06 58.2 77 44.2
CAN.G370.91 Capsicum annuum HOM05D002063 ORTHO05D002075 1.7e-06 57.8 205 26.8
Nn6g33585 Nelumbo nucifera HOM05D007653 ORTHO05D009670 1.7e-06 57.8 267 31.5
BraA08t34475Z Brassica rapa HOM05D002063 ORTHO05D002075 2.2e-06 57.4 209 30.1
CiPaw.10G059700 Carya illinoinensis HOM05D002063 ORTHO05D002075 2.2e-06 57.4 163 29.4
SEGI_16088 Sequoiadendron giganteum HOM05D002063 ORTHO05D002075 2.2e-06 57.4 287 25.8
Atru.chr6.2786 Acer truncatum HOM05D002063 ORTHO05D002075 2.8e-06 57.0 228 25.0
Duzib192G1071 Durio zibethinus HOM05D002063 ORTHO05D002075 3.7e-06 56.6 208 27.9
Nn1g09178 Nelumbo nucifera HOM05D002063 ORTHO05D002075 3.7e-06 56.6 256 23.8
Oeu039912.2 Olea europaea HOM05D002063 ORTHO05D002075 3.7e-06 56.6 227 24.7
Sopen02g021610 Solanum pennellii HOM05D002063 ORTHO05D002075 3.7e-06 56.6 207 24.6
BcaC01g00085 Brassica carinata HOM05D002063 ORTHO05D002075 4.8e-06 56.2 210 31.9
C03p75610 Brassica napus HOM05D002063 ORTHO05D002075 4.8e-06 56.2 210 31.9
CSS0018909 Camellia sinensis var. sinensis HOM05D002063 ORTHO05D002075 4.8e-06 56.2 180 28.3
MBI07_g09571_MAGBIO Magnolia biondii HOM05D002063 ORTHO05D002075 4.8e-06 56.2 222 28.8
Peaxi162Scf00469g00410 Petunia axillaris HOM05D002063 ORTHO05D002075 4.8e-06 56.2 246 27.2
BolC3t19818H Brassica oleracea HOM05D002063 ORTHO05D002075 6.3e-06 55.8 210 31.4
CSS0048552 Camellia sinensis var. sinensis HOM05D002063 ORTHO05D002075 6.3e-06 55.8 180 28.3
Duzib061G0001 Durio zibethinus HOM05D002063 ORTHO05D002075 6.3e-06 55.8 251 26.3
Manes.17G056500 Manihot esculenta HOM05D002063 ORTHO05D002075 6.3e-06 55.8 262 26.7
Solyc02g076680.3 Solanum lycopersicum HOM05D002063 ORTHO05D002075 6.3e-06 55.8 207 24.6
arahy.Tifrunner.gnm1.ann1.F9SG0G Arachis hypogaea HOM05D002063 ORTHO05D002075 8.3e-06 55.5 209 27.8
arahy.Tifrunner.gnm1.ann1.HJ4PFL Arachis hypogaea HOM05D002063 ORTHO05D002075 8.3e-06 55.5 209 27.8
TPR.G11764 Trifolium pratense HOM05D002063 ORTHO05D002075 8.3e-06 55.5 220 27.3
VMungo0540G2378 Vigna mungo HOM05D002063 ORTHO05D002075 8.3e-06 55.5 216 27.3


User provided reference genes

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