Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.016G103900 Populus trichocarpa HOM05D006892 ORTHO05D008592 1.4e-45 186.0 103 100.0
Potri.006G092300 Populus trichocarpa HOM05D006892 ORTHO05D008592 1.7e-19 99.4 58 81.0
Sabra06G0070000 Salix brachista HOM05D006892 ORTHO05D008592 3.0e-19 98.6 78 70.5
Atru.chr8.2090 Acer truncatum HOM05D006892 ORTHO05D008592 2.8e-17 92.0 78 52.6
Dinv37115 Davidia involucrata HOM05D006892 ORTHO05D008592 2.6e-15 85.5 57 61.4
Prupe.6G264500 Prunus persica HOM05D006892 ORTHO05D008592 7.6e-15 84.0 77 46.8
Cc06_g02080 Coffea canephora HOM05D006892 ORTHO05D008592 9.9e-15 83.6 54 68.5
Lj1g0020029 Lotus japonicus HOM05D006892 ORTHO05D008592 9.9e-15 83.6 77 50.6
Thecc.05G029200 Theobroma cacao HOM05D006892 ORTHO05D008592 1.7e-14 82.8 53 69.8
Ciclev10013234m.g Citrus clementina HOM05D006892 ORTHO05D008592 3.8e-14 81.6 54 64.8
Glyma.07G139200 Glycine max HOM05D006892 ORTHO05D008592 3.8e-14 81.6 56 62.5
TAR623G0452 Trochodendron aralioides HOM05D006892 ORTHO05D008592 3.8e-14 81.6 52 63.5
CiPaw.10G149300 Carya illinoinensis HOM05D006892 ORTHO05D008592 8.4e-14 80.5 52 63.5
Glyma.04G105400 Glycine max HOM05D006892 ORTHO05D008592 8.4e-14 80.5 77 49.4
Gohir.A09G152400 Gossypium hirsutum HOM05D006892 ORTHO05D008592 8.4e-14 80.5 52 67.3
Gohir.D09G148100 Gossypium hirsutum HOM05D006892 ORTHO05D008592 8.4e-14 80.5 52 67.3
Gorai.006G169100 Gossypium raimondii HOM05D006892 ORTHO05D008592 8.4e-14 80.5 52 67.3
Psat3g133520 Pisum sativum HOM05D006892 ORTHO05D008592 8.4e-14 80.5 56 62.5
arahy.Tifrunner.gnm1.ann1.KB6CC9 Arachis hypogaea HOM05D006892 ORTHO05D008592 1.4e-13 79.7 52 63.5
arahy.Tifrunner.gnm1.ann1.KX701I Arachis hypogaea HOM05D006892 ORTHO05D008592 1.4e-13 79.7 52 63.5
FvH4_6g12730 Fragaria vesca HOM05D006892 ORTHO05D008592 1.4e-13 79.7 56 55.4
FAN09G3730 Fragaria x ananassa HOM05D006892 ORTHO05D008592 1.4e-13 79.7 56 55.4
RcHm_v2.0_Chr3g0464651 Rosa chinensis HOM05D006892 ORTHO05D008592 1.4e-13 79.7 56 57.1
TAR636G2473 Trochodendron aralioides HOM05D006892 ORTHO05D008592 1.4e-13 79.7 55 58.2
FAN14G5964 Fragaria x ananassa HOM05D006892 ORTHO05D008592 1.9e-13 79.3 56 55.4
TPR.G34921 Trifolium pratense HOM05D006892 ORTHO05D008592 1.9e-13 79.3 56 60.7
Medtr7g065130 Medicago truncatula HOM05D006892 ORTHO05D008592 2.4e-13 79.0 56 62.5
CSS0014654 Camellia sinensis var. sinensis HOM05D006892 ORTHO05D008592 3.2e-13 78.6 56 60.7
MD04G1138900 Malus domestica HOM05D006892 ORTHO05D008592 3.2e-13 78.6 56 60.7
FAN02G3144 Fragaria x ananassa HOM05D006892 ORTHO05D008592 4.2e-13 78.2 56 53.6
Lalb_Chr03g0042701 Lupinus albus HOM05D006892 ORTHO05D008592 4.2e-13 78.2 57 57.9
Haze_20883 Corylus avellana HOM05D006892 ORTHO05D008592 5.4e-13 77.8 57 57.9
Haze_20892 Corylus avellana HOM05D006892 ORTHO05D008592 5.4e-13 77.8 57 57.9
FAN05G3252 Fragaria x ananassa HOM05D006892 ORTHO05D008592 5.4e-13 77.8 56 53.6
Hma1.2p1_0039F.1_g024865 Hydrangea macrophylla HOM05D006892 ORTHO05D008592 5.4e-13 77.8 54 57.4
Hma1.2p1_0039F.1_g024870 Hydrangea macrophylla HOM05D006892 ORTHO05D008592 5.4e-13 77.8 54 57.4
Glyma.18G189800 Glycine max HOM05D006892 ORTHO05D008592 7.1e-13 77.4 56 58.9
Lj3g0005144 Lotus japonicus HOM05D006892 ORTHO05D008592 7.1e-13 77.4 56 58.9
Dinv34454 Davidia involucrata HOM05D006892 ORTHO05D008592 1.2e-12 76.6 77 45.5
MD12G1154700 Malus domestica HOM05D006892 ORTHO05D008592 1.2e-12 76.6 56 55.4
Manes.09G098400 Manihot esculenta HOM05D006892 ORTHO05D008592 1.2e-12 76.6 53 64.2
Lalb_Chr19g0125031 Lupinus albus HOM05D006892 ORTHO05D008592 1.6e-12 76.3 56 58.9
Rhsim05G0199800 Rhododendron simsii HOM05D006892 ORTHO05D008592 2.1e-12 75.9 55 63.6
HanXRQChr05g0156901 Helianthus annuus HOM05D006892 ORTHO05D008592 3.5e-12 75.1 52 51.9
GSVIVG01016437001 Vitis vinifera HOM05D006892 ORTHO05D008592 3.5e-12 75.1 51 62.7
Manes.08G082100 Manihot esculenta HOM05D006892 ORTHO05D008592 4.6e-12 74.7 58 58.6
Gohir.D04G125400 Gossypium hirsutum HOM05D006892 ORTHO05D008592 1.0e-11 73.6 54 63.0
Gorai.012G108500 Gossypium raimondii HOM05D006892 ORTHO05D008592 1.0e-11 73.6 54 63.0
Phvul.008G114100 Phaseolus vulgaris HOM05D006892 ORTHO05D008592 1.0e-11 73.6 52 63.5
CSS0009632 Camellia sinensis var. sinensis HOM05D006892 ORTHO05D008592 1.3e-11 73.2 59 57.6
arahy.Tifrunner.gnm1.ann1.71B432 Arachis hypogaea HOM05D006892 ORTHO05D008592 1.7e-11 72.8 56 58.9
arahy.Tifrunner.gnm1.ann1.AC77RP Arachis hypogaea HOM05D006892 ORTHO05D008592 1.7e-11 72.8 56 58.9
CSS0020330 Camellia sinensis var. sinensis HOM05D006892 ORTHO05D008592 1.7e-11 72.8 59 55.9
Lsat_1_v5_gn_9_32981 Lactuca sativa HOM05D006892 ORTHO05D008592 1.7e-11 72.8 51 52.9
Glyma.01G105400 Glycine max HOM05D006892 ORTHO05D008592 2.3e-11 72.4 57 56.1
TAR633G0729 Trochodendron aralioides HOM05D006892 ORTHO05D008592 2.3e-11 72.4 54 57.4
CSS0005500 Camellia sinensis var. sinensis HOM05D006892 ORTHO05D008592 3.0e-11 72.0 60 55.0
COL.COLO4_14695 Corchorus olitorius HOM05D006892 ORTHO05D008592 3.0e-11 72.0 54 61.1
Medtr4g019640 Medicago truncatula HOM05D006892 ORTHO05D008592 3.9e-11 71.6 58 60.3
CiPaw.09G201300 Carya illinoinensis HOM05D006892 ORTHO05D008592 5.1e-11 71.2 54 63.0
Gohir.A04G085600 Gossypium hirsutum HOM05D006892 ORTHO05D008592 5.1e-11 71.2 54 61.1
Phvul.010G009200 Phaseolus vulgaris HOM05D006892 ORTHO05D008592 8.7e-11 70.5 56 53.6
Glyma.03G073200 Glycine max HOM05D006892 ORTHO05D008592 1.1e-10 70.1 58 56.9
MBI05_g02667_MAGBIO Magnolia biondii HOM05D006892 ORTHO05D008592 1.5e-10 69.7 52 51.9
Actinidia13165 Actinidia chinensis HOM05D006892 ORTHO05D008592 1.9e-10 69.3 57 49.1
MBI14_g02866_MAGBIO Magnolia biondii HOM05D006892 ORTHO05D008592 2.5e-10 68.9 54 46.3
MBI14_g02865_MAGBIO Magnolia biondii HOM05D006892 ORTHO05D008592 3.3e-10 68.6 54 46.3
Manes.07G122400 Manihot esculenta HOM05D006892 ORTHO05D008592 7.3e-10 67.4 51 54.9
Nn2g13528 Nelumbo nucifera HOM05D006892 ORTHO05D008592 9.6e-10 67.0 57 50.9
Psat7g241320 Pisum sativum HOM05D006892 ORTHO05D008592 3.6e-09 65.1 56 57.1
CSS0011916 Camellia sinensis var. sinensis HOM05D006892 ORTHO05D008592 4.8e-09 64.7 55 54.5
Cpa.g.sc56.60 Carica papaya HOM05D006892 ORTHO05D008592 4.8e-09 64.7 52 55.8
Haze_18710 Corylus avellana HOM05D006892 ORTHO05D008592 6.2e-09 64.3 79 44.3
Ciclev10033223m.g Citrus clementina HOM05D006892 ORTHO05D008592 8.1e-09 63.9 38 63.2
Haze_17148 Corylus avellana HOM05D000015 ORTHO05D000270 8.1e-09 63.9 43 65.1
Haze_17150 Corylus avellana HOM05D006892 ORTHO05D008592 1.1e-08 63.5 43 65.1
Cfa001402 Carpinus fangiana HOM05D006892 ORTHO05D008592 1.4e-08 63.2 43 62.8
TPR.G32561 Trifolium pratense HOM05D006892 ORTHO05D008592 1.4e-08 63.2 56 51.8
COL.COLO4_36543 Corchorus olitorius HOM05D006892 ORTHO05D008592 1.8e-08 62.8 56 50.0
GSVIVG01034067001 Vitis vinifera HOM05D006892 ORTHO05D008592 2.4e-08 62.4 54 53.7
PGSC0003DMG400024270 Solanum tuberosum HOM05D006892 ORTHO05D008592 3.1e-08 62.0 54 50.0
CDE02G2266 Ceratophyllum demersum HOM05D006892 ORTHO05D008592 6.9e-08 60.8 56 48.2
MBI14_g02869_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.9e-08 60.8 40 50.0
Manes.10G021300 Manihot esculenta HOM05D006892 ORTHO05D008592 6.9e-08 60.8 51 54.9
Phvul.001G238200 Phaseolus vulgaris HOM05D006892 ORTHO05D008592 9.0e-08 60.5 37 56.8
CiPaw.01G293100 Carya illinoinensis HOM05D006892 ORTHO05D008592 1.2e-07 60.1 34 64.7
DCAR_028810 Daucus carota HOM05D006892 ORTHO05D008592 1.2e-07 60.1 38 57.9
Potri.010G196500 Populus trichocarpa HOM05D006892 ORTHO05D008592 1.2e-07 60.1 54 48.1
Sopen09g006180 Solanum pennellii HOM05D006892 ORTHO05D008592 1.5e-07 59.7 57 45.6
MELO3C033485.2 Cucumis melo HOM05D006892 ORTHO05D008592 2.0e-07 59.3 38 57.9
Actinidia02903 Actinidia chinensis HOM05D006892 ORTHO05D008592 2.6e-07 58.9 61 44.3
CAN.G697.1 Capsicum annuum HOM05D006892 ORTHO05D008592 3.4e-07 58.5 46 54.3
TAR633G0009 Trochodendron aralioides HOM05D006892 ORTHO05D414936 3.4e-07 58.5 45 55.6
ClCG04G007580 Citrullus lanatus HOM05D006892 ORTHO05D008592 4.5e-07 58.2 38 57.9
HanXRQChr08g0221291 Helianthus annuus HOM05D006892 ORTHO05D008592 4.5e-07 58.2 42 54.8
Medtr3g069540 Medicago truncatula HOM05D006892 ORTHO05D008592 4.5e-07 58.2 41 56.1
Eucgr.G02995 Eucalyptus grandis HOM05D006892 ORTHO05D008592 7.6e-07 57.4 43 55.8
Thecc.10G031400 Theobroma cacao HOM05D006892 ORTHO05D008592 9.9e-07 57.0 37 62.2
Atru.chr12.266 Acer truncatum HOM05D006892 ORTHO05D008592 2.2e-06 55.8 41 63.4
Sopen09g006190 Solanum pennellii HOM05D006892 ORTHO05D008592 2.9e-06 55.5 48 47.9
Gohir.A10G225300 Gossypium hirsutum HOM05D006892 ORTHO05D008592 3.8e-06 55.1 56 44.6
Sabra08G0045200 Salix brachista HOM05D006892 ORTHO05D008592 3.8e-06 55.1 54 44.4
Sed0015200 Sechium edule HOM05D006892 ORTHO05D008592 3.8e-06 55.1 38 52.6
Eucgr.G02997 Eucalyptus grandis HOM05D006892 ORTHO05D008592 6.4e-06 54.3 43 53.5


User provided reference genes

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