Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.016G101966 Populus trichocarpa HOM05D000296 ORTHO05D050430 1.3e-57 226.1 105 100.0
Potri.018G144101 Populus trichocarpa HOM05D000296 ORTHO05D050430 1.5e-18 96.3 65 73.8
Potri.015G032200 Populus trichocarpa HOM05D000296 ORTHO05D000175 1.2e-15 86.7 68 63.2
Sabra15G0026600 Salix brachista HOM05D000296 ORTHO05D000175 3.2e-13 78.6 61 62.3
SabraUnG0006000 Salix brachista HOM05D000296 ORTHO05D000175 3.2e-13 78.6 61 62.3
Potri.012G041600 Populus trichocarpa HOM05D000296 ORTHO05D000175 5.5e-13 77.8 68 58.8
Sabra12G0028600 Salix brachista HOM05D000296 ORTHO05D000175 9.5e-13 77.0 68 57.4
TWI15G0992 Tripterygium wilfordii HOM05D000296 ORTHO05D000175 8.0e-12 73.9 74 52.7
TWI81G0256 Tripterygium wilfordii HOM05D000296 ORTHO05D000175 1.8e-11 72.8 74 51.4
MD06G1234000 Malus domestica HOM05D000296 ORTHO05D000175 4.9e-09 64.7 90 42.2
Hma1.2p1_0095F.1_g047510 Hydrangea macrophylla HOM05D000296 ORTHO05D000175 1.4e-08 63.2 49 59.2
Prupe.5G238500 Prunus persica HOM05D000296 ORTHO05D000175 1.8e-08 62.8 75 45.3
DCAR_002661 Daucus carota HOM05D000296 ORTHO05D000175 3.1e-08 62.0 74 44.6
MBI13_g21696_MAGBIO Magnolia biondii HOM05D000296 ORTHO05D000175 3.1e-08 62.0 68 44.1
Solyc03g098030.3 Solanum lycopersicum HOM05D000296 ORTHO05D000175 3.1e-08 62.0 58 53.4
Sopen03g028740 Solanum pennellii HOM05D000296 ORTHO05D000175 3.1e-08 62.0 58 53.4
Nn4g24540 Nelumbo nucifera HOM05D000296 ORTHO05D000175 4.1e-08 61.6 68 50.0
CANSAT78G1822 Cannabis sativa HOM05D000296 ORTHO05D000175 5.4e-08 61.2 46 63.0
Lj5C164T8 Lonicera japonica HOM05D000296 ORTHO05D000175 5.4e-08 61.2 98 40.8
Sabra10G0074400 Salix brachista HOM05D000296 ORTHO05D000175 5.4e-08 61.2 51 54.9
Duzib268G0378 Durio zibethinus HOM05D000296 ORTHO05D000175 7.0e-08 60.8 53 52.8
Aqoxy3G04058 Aquilegia oxysepala HOM05D000296 ORTHO05D000175 1.2e-07 60.1 50 56.0
Dinv20530 Davidia involucrata HOM05D000296 ORTHO05D000175 1.6e-07 59.7 52 55.8
MD14G1240700 Malus domestica HOM05D000296 ORTHO05D000175 1.6e-07 59.7 78 44.9
Oeu058745.1 Olea europaea HOM05D000296 ORTHO05D000175 1.6e-07 59.7 52 53.8
Gohir.A03G113100 Gossypium hirsutum HOM05D000296 ORTHO05D000175 2.0e-07 59.3 52 51.9
Gohir.D02G137400 Gossypium hirsutum HOM05D000296 ORTHO05D000175 2.0e-07 59.3 52 51.9
Gorai.005G153900 Gossypium raimondii HOM05D000296 ORTHO05D000175 2.0e-07 59.3 52 51.9
Nn3g18464 Nelumbo nucifera HOM05D000296 ORTHO05D000175 2.0e-07 59.3 52 51.9
arahy.Tifrunner.gnm1.ann1.Z9C4TD Arachis hypogaea HOM05D000296 ORTHO05D000175 3.5e-07 58.5 56 50.0
Cc11_g05790 Coffea canephora HOM05D000296 ORTHO05D000175 3.5e-07 58.5 74 43.2
Migut.I00576 Erythranthe guttata HOM05D000296 ORTHO05D000175 3.5e-07 58.5 49 59.2
Peaxi162Scf01111g00311 Petunia axillaris HOM05D000296 ORTHO05D000175 3.5e-07 58.5 49 55.1
Psat6g100640 Pisum sativum HOM05D000296 ORTHO05D000175 3.5e-07 58.5 82 42.7
Sopen06g028760 Solanum pennellii HOM05D000296 ORTHO05D000175 3.5e-07 58.5 54 55.6
PGSC0003DMG400026956 Solanum tuberosum HOM05D000296 ORTHO05D000175 3.5e-07 58.5 54 55.6
Cpa.g.sc2.128 Carica papaya HOM05D000296 ORTHO05D000175 4.5e-07 58.2 49 53.1
THA.LOC104805099 Tarenaya hassleriana HOM05D000296 ORTHO05D000175 4.5e-07 58.2 78 41.0
GSVIVG01011597001 Vitis vinifera HOM05D000296 ORTHO05D000175 4.5e-07 58.2 52 51.9
Nitab4.5_0001935g0040 Nicotiana tabacum HOM05D000296 ORTHO05D000175 5.9e-07 57.8 43 60.5
RcHm_v2.0_Chr4g0433671 Rosa chinensis HOM05D000296 ORTHO05D000175 5.9e-07 57.8 69 44.9
CARHR144470 Cardamine hirsuta HOM05D000296 ORTHO05D000175 7.7e-07 57.4 75 40.0
Migut.L00616 Erythranthe guttata HOM05D000296 ORTHO05D000175 7.7e-07 57.4 56 51.8
FAN22G1570 Fragaria x ananassa HOM05D000296 ORTHO05D000175 7.7e-07 57.4 49 53.1
Manes.17G089300 Manihot esculenta HOM05D000296 ORTHO05D000175 7.7e-07 57.4 52 51.9
Nitab4.5_0000430g0060 Nicotiana tabacum HOM05D000296 ORTHO05D000175 7.7e-07 57.4 69 43.5
Nitab4.5_0000521g0070 Nicotiana tabacum HOM05D000296 ORTHO05D000175 7.7e-07 57.4 43 60.5
PGSC0003DMG400022789 Solanum tuberosum HOM05D000296 ORTHO05D000175 7.7e-07 57.4 43 60.5
CSS0001714 Camellia sinensis var. sinensis HOM05D000296 ORTHO05D000175 1.0e-06 57.0 46 56.5
CSS0003510 Camellia sinensis var. sinensis HOM05D000296 ORTHO05D000175 1.0e-06 57.0 46 56.5
MELO3C005242.2 Cucumis melo HOM05D000296 ORTHO05D000175 1.0e-06 57.0 59 49.2
DCAR_023544 Daucus carota HOM05D000296 ORTHO05D000175 1.0e-06 57.0 53 50.9
Dinv08905 Davidia involucrata HOM05D000296 ORTHO05D000175 1.0e-06 57.0 45 60.0
FvH4_4g26100 Fragaria vesca HOM05D000296 ORTHO05D000175 1.0e-06 57.0 69 44.9
FAN12G0839 Fragaria x ananassa HOM05D000296 ORTHO05D000175 1.0e-06 57.0 69 44.9
FAN12G1144 Fragaria x ananassa HOM05D000296 ORTHO05D000175 1.0e-06 57.0 69 44.9
Thecc.02G304100 Theobroma cacao HOM05D000296 ORTHO05D000175 1.0e-06 57.0 49 51.0
MD13G1015800 Malus domestica HOM05D000296 ORTHO05D000175 1.3e-06 56.6 49 57.1
TWI74G0779 Tripterygium wilfordii HOM05D000296 ORTHO05D000175 1.3e-06 56.6 56 50.0
ATR0598G168 Amborella trichopoda HOM05D000296 ORTHO05D000175 1.7e-06 56.2 83 39.8
Eucgr.B02653 Eucalyptus grandis HOM05D000296 ORTHO05D000175 1.7e-06 56.2 52 51.9
FAN07G1380 Fragaria x ananassa HOM05D000296 ORTHO05D000175 1.7e-06 56.2 49 51.0
Psat7g084120 Pisum sativum HOM05D000296 ORTHO05D000175 1.7e-06 56.2 80 41.2
Sabra08G0105800 Salix brachista HOM05D000296 ORTHO05D000175 1.7e-06 56.2 51 52.9
Sopen01g001010 Solanum pennellii HOM05D000296 ORTHO05D000175 1.7e-06 56.2 43 58.1
TPR.G35529 Trifolium pratense HOM05D000296 ORTHO05D000175 1.7e-06 56.2 53 49.1
ClCG01G006780 Citrullus lanatus HOM05D000296 ORTHO05D000175 2.3e-06 55.8 59 45.8
Duzib248G0299 Durio zibethinus HOM05D000296 ORTHO05D000175 2.3e-06 55.8 48 52.1
Lj2g0014597 Lotus japonicus HOM05D000296 ORTHO05D000175 2.3e-06 55.8 56 46.4
Lj2g0021544 Lotus japonicus HOM05D000296 ORTHO05D000175 2.3e-06 55.8 48 52.1
Rhsim09G0085700 Rhododendron simsii HOM05D000296 ORTHO05D000175 2.3e-06 55.8 46 56.5
Sed0006650 Sechium edule HOM05D000296 ORTHO05D000175 2.3e-06 55.8 47 55.3
Manes.15G138500 Manihot esculenta HOM05D000296 ORTHO05D000175 2.9e-06 55.5 49 53.1
Nitab4.5_0003309g0060 Nicotiana tabacum HOM05D000296 ORTHO05D000175 2.9e-06 55.5 58 48.3
Potri.008G139600 Populus trichocarpa HOM05D000296 ORTHO05D000175 3.8e-06 55.1 51 52.9
PGR083G1699 Punica granatum HOM05D000296 ORTHO05D000175 3.8e-06 55.1 50 54.0
VMungo0251G1610 Vigna mungo HOM05D000296 ORTHO05D000175 3.8e-06 55.1 52 50.0
Carub.0005s0088 Capsella rubella HOM05D000296 ORTHO05D000175 5.0e-06 54.7 49 51.0
DCAR_030306 Daucus carota HOM05D000296 ORTHO05D000175 5.0e-06 54.7 53 47.2
Thhalv10004281m.g Eutrema salsugineum HOM05D000296 ORTHO05D000175 5.0e-06 54.7 49 49.0
FAN17G1651 Fragaria x ananassa HOM05D000296 ORTHO05D000175 5.0e-06 54.7 69 43.5
Lj4g0019218 Lotus japonicus HOM05D000296 ORTHO05D000175 5.0e-06 54.7 70 40.0
C02p50030 Brassica napus HOM05D000296 ORTHO05D000175 6.6e-06 54.3 49 51.0
BolC2t11082H Brassica oleracea HOM05D000296 ORTHO05D000175 6.6e-06 54.3 49 51.0
CSS0042347 Camellia sinensis var. sinensis HOM05D000296 ORTHO05D000175 6.6e-06 54.3 49 53.1
MD16G1013300 Malus domestica HOM05D000296 ORTHO05D000175 6.6e-06 54.3 46 58.7
Solyc01g005090.3 Solanum lycopersicum HOM05D000296 ORTHO05D000175 6.6e-06 54.3 58 46.6
AL5G11010 Arabidopsis lyrata HOM05D000296 ORTHO05D000175 8.6e-06 53.9 49 49.0
AT2G01900 Arabidopsis thaliana HOM05D000296 ORTHO05D000175 8.6e-06 53.9 49 49.0
ECA234G2996 Erigeron canadensis HOM05D000296 ORTHO05D000175 8.6e-06 53.9 49 55.1
Eucgr.G02072 Eucalyptus grandis HOM05D000296 ORTHO05D000175 8.6e-06 53.9 49 51.0
Peaxi162Scf00643g00651 Petunia axillaris HOM05D000296 ORTHO05D000175 8.6e-06 53.9 55 50.9
Prupe.1G337900 Prunus persica HOM05D000296 ORTHO05D000175 8.6e-06 53.9 49 53.1
QL03p039098 Quercus lobata HOM05D000296 ORTHO05D000175 8.6e-06 53.9 52 46.2


User provided reference genes

Program Settings