Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.016G099700 Populus trichocarpa HOM05D007483 ORTHO05D009133 6.5e-76 287.3 149 100.0
Sabra16G0100900 Salix brachista HOM05D007483 ORTHO05D009133 5.2e-65 251.1 146 83.6
Sabra13G0104100 Salix brachista HOM05D007483 ORTHO05D009133 4.6e-53 211.5 126 88.9
Duzib093G2195 Durio zibethinus HOM05D007483 ORTHO05D009133 1.3e-39 166.8 86 88.4
GSVIVG01034153001 Vitis vinifera HOM05D007483 ORTHO05D009133 1.3e-39 166.8 83 89.2
CiPaw.09G194400 Carya illinoinensis HOM05D007483 ORTHO05D009133 1.7e-39 166.4 80 92.5
Eucgr.A01276 Eucalyptus grandis HOM05D007483 ORTHO05D009133 2.2e-39 166.0 84 89.3
MSTRG.19078 Avicennia marina HOM05D007483 ORTHO05D009133 1.4e-38 163.3 79 92.4
Gohir.A12G221500 Gossypium hirsutum HOM05D007483 ORTHO05D009133 1.4e-38 163.3 112 70.5
Thecc.05G037700 Theobroma cacao HOM05D007483 ORTHO05D009133 1.4e-38 163.3 86 86.0
CAN.G324.11 Capsicum annuum HOM05D007483 ORTHO05D009133 1.9e-38 162.9 86 86.0
PSO063G2390 Papaver somniferum HOM05D007483 ORTHO05D009133 1.9e-38 162.9 86 82.6
Sopen10g034250 Solanum pennellii HOM05D007483 ORTHO05D009133 2.4e-38 162.5 86 84.9
Aqoxy1G00916 Aquilegia oxysepala HOM05D007483 ORTHO05D009133 5.4e-38 161.4 83 84.3
Dinv35587 Davidia involucrata HOM05D007483 ORTHO05D009133 9.2e-38 160.6 79 89.9
FAN09G2152 Fragaria x ananassa HOM05D007483 ORTHO05D009133 9.2e-38 160.6 80 87.5
Gohir.D12G223900 Gossypium hirsutum HOM05D007483 ORTHO05D009133 9.2e-38 160.6 138 62.3
Cfa016672 Carpinus fangiana HOM05D007483 ORTHO05D009133 1.2e-37 160.2 76 93.4
FAN14G1457 Fragaria x ananassa HOM05D007483 ORTHO05D009133 1.2e-37 160.2 80 87.5
Sed0013393 Sechium edule HOM05D007483 ORTHO05D009133 1.2e-37 160.2 77 89.6
arahy.Tifrunner.gnm1.ann1.A9IP9X Arachis hypogaea HOM05D007483 ORTHO05D009133 1.6e-37 159.8 86 81.4
ClCG04G008120 Citrullus lanatus HOM05D007483 ORTHO05D009133 1.6e-37 159.8 77 88.3
Actinidia13151 Actinidia chinensis HOM05D007483 ORTHO05D009133 2.7e-37 159.1 76 93.4
RcHm_v2.0_Chr3g0466381 Rosa chinensis HOM05D007483 ORTHO05D009133 2.7e-37 159.1 88 83.0
Migut.J00322 Erythranthe guttata HOM05D007483 ORTHO05D009133 4.6e-37 158.3 125 60.0
PSO339G1657 Papaver somniferum HOM05D007483 ORTHO05D009133 4.6e-37 158.3 135 60.0
FAN02G3616 Fragaria x ananassa HOM05D007483 ORTHO05D009133 6.0e-37 157.9 80 86.2
Nn2g13380 Nelumbo nucifera HOM05D007483 ORTHO05D009133 7.8e-37 157.5 108 69.4
Lj3g0014039 Lotus japonicus HOM05D007483 ORTHO05D009133 1.0e-36 157.1 115 65.2
arahy.Tifrunner.gnm1.ann1.29J2UD Arachis hypogaea HOM05D007483 ORTHO05D009133 1.7e-36 156.4 116 65.5
Manes.08G088800 Manihot esculenta HOM05D007483 ORTHO05D009133 1.7e-36 156.4 154 55.2
Nitab4.5_0000216g0380 Nicotiana tabacum HOM05D007483 ORTHO05D009133 1.7e-36 156.4 83 81.9
CARHR083670 Cardamine hirsuta HOM05D007483 ORTHO05D009133 2.3e-36 156.0 77 88.3
FAN05G4215 Fragaria x ananassa HOM05D007483 ORTHO05D009133 2.3e-36 156.0 80 85.0
THA.LOC104816252 Tarenaya hassleriana HOM05D007483 ORTHO05D009133 2.3e-36 156.0 85 84.7
A05p39660 Brassica napus HOM05D007483 ORTHO05D009133 3.9e-36 155.2 87 80.5
C05p58700 Brassica napus HOM05D007483 ORTHO05D009133 3.9e-36 155.2 87 80.5
BraA05t22748Z Brassica rapa HOM05D007483 ORTHO05D009133 3.9e-36 155.2 87 80.5
Lalb_Chr07g0193781 Lupinus albus HOM05D007483 ORTHO05D009133 3.9e-36 155.2 82 79.3
BolC5t34519H Brassica oleracea HOM05D007483 ORTHO05D009133 5.1e-36 154.8 77 87.0
Carub.0003s0842 Capsella rubella HOM05D007483 ORTHO05D009133 6.6e-36 154.5 78 84.6
Glyma.03G066000 Glycine max HOM05D007483 ORTHO05D009133 6.6e-36 154.5 82 79.3
AT3G09310 Arabidopsis thaliana HOM05D007483 ORTHO05D009133 8.6e-36 154.1 75 89.3
BcaC05g29659 Brassica carinata HOM05D007483 ORTHO05D009133 8.6e-36 154.1 84 83.3
Lsat_1_v5_gn_9_30381 Lactuca sativa HOM05D007483 ORTHO05D009133 8.6e-36 154.1 77 87.0
QL07p048670 Quercus lobata HOM05D007483 ORTHO05D009133 8.6e-36 154.1 76 88.2
Sp3g07690 Schrenkiella parvula HOM05D007483 ORTHO05D009133 8.6e-36 154.1 84 83.3
SEGI_13406 Sequoiadendron giganteum HOM05D007483 ORTHO05D009133 8.6e-36 154.1 76 86.8
EL10Ac6g14169 Beta vulgaris HOM05D007483 ORTHO05D009133 1.5e-35 153.3 81 82.7
Medtr4g021820 Medicago truncatula HOM05D007483 ORTHO05D009133 1.5e-35 153.3 82 79.3
TWI74G0092 Tripterygium wilfordii HOM05D007483 ORTHO05D009133 1.9e-35 152.9 148 54.7
Aa31LG3G1800 Aethionema arabicum HOM05D007483 ORTHO05D009133 2.5e-35 152.5 75 88.0
Phvul.010G011100 Phaseolus vulgaris HOM05D007483 ORTHO05D009133 2.5e-35 152.5 75 88.0
BcaC05g29522 Brassica carinata HOM05D007483 ORTHO05D009133 3.3e-35 152.1 85 80.0
Cfa017361 Carpinus fangiana HOM05D007483 ORTHO05D009133 3.3e-35 152.1 80 87.5
Thhalv10021669m.g Eutrema salsugineum HOM05D007483 ORTHO05D009133 4.3e-35 151.8 75 88.0
Ah.06g191870 Amaranthus hybridus HOM05D007483 ORTHO05D009133 5.6e-35 151.4 81 84.0
AUR62025813 Chenopodium quinoa HOM05D007483 ORTHO05D009133 5.6e-35 151.4 76 86.8
AL3G20460 Arabidopsis lyrata HOM05D007483 ORTHO05D009133 7.3e-35 151.0 82 81.7
Ca_05061_v3 Cicer arietinum L. HOM05D007483 ORTHO05D009133 9.5e-35 150.6 76 84.2
Hund10634 Selenicereus undatus HOM05D007483 ORTHO05D009133 9.5e-35 150.6 89 76.4
VMungo0331G1516 Vigna mungo HOM05D007483 ORTHO05D009133 1.2e-34 150.2 75 85.3
Os11g0706100 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 1.6e-34 149.8 77 81.8
Cc06_g02530 Coffea canephora HOM05D007483 ORTHO05D009133 2.8e-34 149.1 83 80.7
HanXRQChr16g0497811 Helianthus annuus HOM05D007483 ORTHO05D009133 2.8e-34 149.1 109 64.2
SGA_v2.0_scaffold126G33776 Striga asiatica HOM05D007483 ORTHO05D009133 3.6e-34 148.7 78 85.9
ECA247G0729 Erigeron canadensis HOM05D001424 ORTHO05D009133 4.7e-34 148.3 82 80.5
Solyc10g084810.3 Solanum lycopersicum HOM05D007483 ORTHO05D009133 6.2e-34 147.9 72 87.5
Zm00001eb164460 Zea mays HOM05D007483 ORTHO05D009133 6.2e-34 147.9 79 81.0
unitig_744.g24653 Utricularia gibba HOM05D000968 ORTHO05D003096 8.1e-34 147.5 83 75.9
Prupe.6G257100 Prunus persica HOM05D007483 ORTHO05D009133 1.4e-33 146.7 88 73.9
MD12G1143600 Malus domestica HOM05D007483 ORTHO05D009133 1.8e-33 146.4 143 53.1
TPR.G7337 Trifolium pratense HOM05D007483 ORTHO05D009133 2.4e-33 146.0 86 75.6
CANSAT11G2488 Cannabis sativa HOM05D007483 ORTHO05D009133 8.9e-33 144.1 80 77.5
HPP92_019244 Vanilla planifolia HOM05D007483 ORTHO05D009133 8.9e-33 144.1 114 61.4
DCAR_028750 Daucus carota HOM05D007483 ORTHO05D009133 1.5e-32 143.3 72 84.7
Oeu007795.1 Olea europaea HOM05D007483 ORTHO05D009133 5.8e-32 141.4 69 87.0
CBR_g19672 Chara braunii HOM05D007483 ORTHO05D009133 3.8e-31 138.7 80 72.5
Pp3c15_21390 Physcomitrium patens HOM05D007483 ORTHO05D009133 3.8e-31 138.7 113 56.6
AagrBONN_evm.TU.Sc2ySwM_228.2371 Anthoceros agrestis HOM05D007483 ORTHO05D009133 6.4e-31 137.9 78 75.6
Mapoly0019s0017 Marchantia polymorpha HOM05D007483 ORTHO05D009133 6.4e-31 137.9 85 68.2
Rhsim04G0158000 Rhododendron simsii HOM05D007483 ORTHO05D009133 5.4e-30 134.8 69 88.4
MBI05_g28376_MAGBIO Magnolia biondii HOM05D007483 ORTHO05D009133 1.6e-29 133.3 68 86.8
Cpa.g.sc169.23 Carica papaya HOM05D007483 ORTHO05D009133 3.5e-29 132.1 115 58.3
FvH4_6g13510 Fragaria vesca HOM05D007483 ORTHO05D009133 1.3e-28 130.2 59 91.5
CsaV3_4G025070 Cucumis sativus L. HOM05D007483 ORTHO05D009133 1.7e-28 129.8 64 87.5
TAR636G3143 Trochodendron aralioides HOM05D007483 ORTHO05D009133 1.7e-28 129.8 84 72.6
Os02g0260400 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 2.3e-28 129.4 60 88.3
Nitab4.5_0000202g0060 Nicotiana tabacum HOM05D007483 ORTHO05D009133 6.6e-28 127.9 67 85.1
MELO3C033192.2 Cucumis melo HOM05D007483 ORTHO05D009133 1.1e-27 127.1 66 84.8
PGSC0003DMG400011065 Solanum tuberosum HOM05D007483 ORTHO05D009133 1.5e-27 126.7 68 82.4
ATR0559G251 Amborella trichopoda HOM05D007483 ORTHO05D009133 7.3e-27 124.4 79 72.2
Lj2A93G81 Lonicera japonica HOM05D007483 ORTHO05D009133 2.8e-26 122.5 62 88.7
Cre17.g720183 Chlamydomonas reinhardtii HOM05D007483 ORTHO05D009133 1.8e-25 119.8 72 66.7
SMO165G0096 Selaginella moellendorffii HOM05D007483 ORTHO05D009133 5.8e-24 114.8 66 75.8
Ciclev10012381m.g Citrus clementina HOM05D007483 ORTHO05D009133 9.9e-24 114.0 97 60.8
Peaxi162Scf00094g01112 Petunia axillaris HOM05D007483 ORTHO05D009133 1.1e-22 110.5 75 66.7
PRCOL_00002574 Prasinoderma coloniale HOM05D007483 ORTHO05D009133 2.5e-19 99.4 68 69.1
MCO07G608 Micromonas commoda HOM05D007483 ORTHO05D009133 2.8e-18 95.9 63 57.1
Psat2g094360 Pisum sativum HOM05D007483 ORTHO05D009133 3.2e-14 82.4 60 66.7
CBR_g19673 Chara braunii HOM05D007483 ORTHO05D009133 4.9e-07 58.5 37 64.9


User provided reference genes

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