Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.016G099600 Populus trichocarpa HOM05D006282 ORTHO05D007460 8.9e-37 156.4 76 100.0
Manes.11G128100 Manihot esculenta HOM05D006282 ORTHO05D007460 7.1e-18 93.6 76 61.8
Manes.04G048673 Manihot esculenta HOM05D006282 ORTHO05D007460 2.3e-16 88.6 77 62.3
Gohir.D10G124600 Gossypium hirsutum HOM05D006282 ORTHO05D007460 3.0e-16 88.2 76 63.2
Gorai.011G137700 Gossypium raimondii HOM05D006282 ORTHO05D007460 3.0e-16 88.2 76 63.2
Atru.chr4.1364 Acer truncatum HOM05D006282 ORTHO05D007460 3.9e-16 87.8 50 78.0
Gohir.A10G141900 Gossypium hirsutum HOM05D006282 ORTHO05D007460 8.6e-16 86.7 76 60.5
CsaV3_4G002680 Cucumis sativus L. HOM05D006282 ORTHO05D007460 1.1e-15 86.3 76 53.9
Thecc.04G169300 Theobroma cacao HOM05D006282 ORTHO05D007460 1.5e-15 85.9 76 61.8
Thecc.04G169400 Theobroma cacao HOM05D006282 ORTHO05D007460 1.5e-15 85.9 66 68.2
Manes.04G047561 Manihot esculenta HOM05D006282 ORTHO05D007460 7.3e-15 83.6 77 59.7
Gohir.D02G109100 Gossypium hirsutum HOM05D006282 ORTHO05D007460 2.8e-14 81.6 66 65.2
Hma1.2p1_0324F.1_g125760 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 2.8e-14 81.6 76 57.9
ClCG07G015130 Citrullus lanatus HOM05D002360 ORTHO05D006971 3.6e-14 81.3 75 50.7
MELO3C017773.2 Cucumis melo HOM05D006282 ORTHO05D007460 6.2e-14 80.5 67 56.7
Hma1.2p1_0807F.1_g221500 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 6.2e-14 80.5 76 56.6
Manes.04G045337 Manihot esculenta HOM05D006282 ORTHO05D007460 6.2e-14 80.5 76 53.9
Manes.04G046449 Manihot esculenta HOM05D006282 ORTHO05D007460 6.2e-14 80.5 73 57.5
Lalb_Chr08g0233621 Lupinus albus HOM05D006282 ORTHO05D007460 1.1e-13 79.7 78 53.8
Prupe.1G203300 Prunus persica HOM05D006282 ORTHO05D007460 1.1e-13 79.7 83 56.6
Sed0024901 Sechium edule HOM05D006282 ORTHO05D007460 1.4e-13 79.3 76 51.3
Gorai.005G124500 Gossypium raimondii HOM05D006282 ORTHO05D007460 1.8e-13 79.0 67 65.7
Gohir.A02G091500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 3.1e-13 78.2 67 64.2
Ciclev10023861m.g Citrus clementina HOM05D006282 ORTHO05D007460 4.0e-13 77.8 79 59.5
COL.COLO4_10135 Corchorus olitorius HOM05D006282 ORTHO05D007460 6.8e-13 77.0 77 57.1
FAN26G2261 Fragaria x ananassa HOM05D006282 ORTHO05D007460 6.8e-13 77.0 70 58.6
Prupe.1G203400 Prunus persica HOM05D006282 ORTHO05D007460 6.8e-13 77.0 78 50.0
QL10p052970 Quercus lobata HOM05D006282 ORTHO05D007460 8.9e-13 76.6 66 60.6
CiPaw.01G172100 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.2e-12 76.3 73 60.3
Gohir.A10G142000 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.2e-12 76.3 76 53.9
Gohir.D10G124500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 2.0e-12 75.5 76 52.6
CiPaw.01G172200 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.6e-12 75.1 73 58.9
Rhsim02G0083100 Rhododendron simsii HOM05D006282 ORTHO05D007460 2.6e-12 75.1 71 56.3
CiPaw.01G172600 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.4e-12 74.7 70 62.9
Ciclev10023163m.g Citrus clementina HOM05D006282 ORTHO05D007460 3.4e-12 74.7 79 57.0
Gorai.011G137600 Gossypium raimondii HOM05D006282 ORTHO05D007460 3.4e-12 74.7 76 52.6
Cfa015244 Carpinus fangiana HOM05D006282 ORTHO05D007460 5.8e-12 73.9 76 55.3
Cfa015249 Carpinus fangiana HOM05D006282 ORTHO05D007460 5.8e-12 73.9 76 55.3
Lsat_1_v5_gn_9_60260 Lactuca sativa HOM05D006282 ORTHO05D007460 5.8e-12 73.9 69 53.6
Cfa015231 Carpinus fangiana HOM05D006282 ORTHO05D007460 7.6e-12 73.6 76 55.3
CiPaw.05G255000 Carya illinoinensis HOM05D006282 ORTHO05D007460 7.6e-12 73.6 67 58.2
Nn1g09678 Nelumbo nucifera HOM05D006282 ORTHO05D007460 7.6e-12 73.6 76 51.3
Nn1g09677 Nelumbo nucifera HOM05D006282 ORTHO05D007460 9.9e-12 73.2 49 65.3
TWI63G0935 Tripterygium wilfordii HOM05D006282 ORTHO05D007460 9.9e-12 73.2 72 55.6
CiPaw.01G172500 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.7e-11 72.4 73 58.9
Cc00_g15290 Coffea canephora HOM05D006282 ORTHO05D007460 1.7e-11 72.4 77 51.9
Oeu023771.1 Olea europaea HOM05D006282 ORTHO05D007460 1.7e-11 72.4 77 48.1
Cfa015251 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.2e-11 72.0 72 50.0
Cfa015245 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.9e-11 71.6 67 58.2
Cfa015254 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.8e-11 71.2 76 55.3
CiPaw.01G201300 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.8e-11 71.2 76 52.6
Oeu016605.1 Olea europaea HOM05D006282 ORTHO05D007460 4.9e-11 70.9 76 47.4
Cc03_g13680 Coffea canephora HOM05D006282 ORTHO05D007460 6.4e-11 70.5 77 50.6
QL10p053002 Quercus lobata HOM05D006282 ORTHO05D007460 8.4e-11 70.1 75 48.0
QL10p053038 Quercus lobata HOM05D006282 ORTHO05D007460 8.4e-11 70.1 66 59.1
Cc00_g15280 Coffea canephora HOM05D006282 ORTHO05D007460 1.1e-10 69.7 77 50.6
Oeu016604.1 Olea europaea HOM05D006282 ORTHO05D007460 1.1e-10 69.7 76 46.1
CiPaw.02G102600 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.4e-10 69.3 77 51.9
QL10p052968 Quercus lobata HOM05D006282 ORTHO05D007460 1.4e-10 69.3 75 48.0
TAR362G0908 Trochodendron aralioides HOM05D006282 ORTHO05D007460 1.4e-10 69.3 71 47.9
Cfa015246 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.9e-10 68.9 76 52.6
CiPaw.02G102700 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.9e-10 68.9 81 53.1
Cc00_g33840 Coffea canephora HOM05D006282 ORTHO05D007460 1.9e-10 68.9 77 48.1
QL10p052782 Quercus lobata HOM05D006282 ORTHO05D007460 1.9e-10 68.9 75 52.0
Cfa015238 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.2e-10 68.2 76 57.9
QL10p052947 Quercus lobata HOM05D006282 ORTHO05D007460 3.2e-10 68.2 75 50.7
QL10p052996 Quercus lobata HOM05D006282 ORTHO05D007460 3.2e-10 68.2 75 46.7
Cfa015242 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.1e-10 67.8 70 60.0
Cfa015252 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.1e-10 67.8 67 55.2
Oeu034174.1 Olea europaea HOM05D006282 ORTHO05D007460 4.1e-10 67.8 67 49.3
Cfa015253 Carpinus fangiana HOM05D006282 ORTHO05D007460 5.4e-10 67.4 67 55.2
QL10p053004 Quercus lobata HOM05D006282 ORTHO05D007460 5.4e-10 67.4 66 57.6
Hma1.2p1_3261F.1_g334650 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 7.1e-10 67.0 67 53.7
MBI07_g38402_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 7.1e-10 67.0 50 58.0
MBI07_g38403_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 7.1e-10 67.0 66 47.0
Nn1g09676 Nelumbo nucifera HOM05D006282 ORTHO05D007460 7.1e-10 67.0 66 53.0
Lalb_Chr11g0073031 Lupinus albus HOM05D006282 ORTHO05D007460 9.2e-10 66.6 69 50.7
QL10p052979 Quercus lobata HOM05D006282 ORTHO05D007460 1.2e-09 66.2 75 46.7
Cfa015241 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.6e-09 65.9 79 55.7
CiPaw.01G033300 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.6e-09 65.9 76 50.0
ClCG07G015250 Citrullus lanatus HOM05D006282 ORTHO05D007460 1.6e-09 65.9 78 46.2
Oeu020810.1 Olea europaea HOM05D006282 ORTHO05D007460 1.6e-09 65.9 67 49.3
QL10p052886 Quercus lobata HOM05D006282 ORTHO05D007460 1.6e-09 65.9 75 50.7
Cfa015237 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.1e-09 65.5 72 56.9
QL10p053061 Quercus lobata HOM05D006282 ORTHO05D007460 2.1e-09 65.5 69 55.1
CiPaw.01G172000 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.7e-09 65.1 76 48.7
CiPaw.01G172400 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.7e-09 65.1 76 48.7
Eucgr.H00330 Eucalyptus grandis HOM05D006282 ORTHO05D007460 2.7e-09 65.1 77 50.6
QL10p052881 Quercus lobata HOM05D006282 ORTHO05D007460 2.7e-09 65.1 75 53.3
Peaxi162Scf00075g01414 Petunia axillaris HOM05D006282 ORTHO05D007460 3.5e-09 64.7 64 51.6
QL10p052931 Quercus lobata HOM05D006282 ORTHO05D007460 4.6e-09 64.3 75 49.3
Cfa015232 Carpinus fangiana HOM05D006282 ORTHO05D007460 6.0e-09 63.9 77 54.5
CiPaw.02G102800 Carya illinoinensis HOM05D006282 ORTHO05D007460 7.8e-09 63.5 68 51.5
Sopen08g004950 Solanum pennellii HOM05D006282 ORTHO05D007460 7.8e-09 63.5 76 42.1
Cfa015248 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.0e-08 63.2 76 51.3
CsaV3_4G002840 Cucumis sativus L. HOM05D006282 ORTHO05D007460 1.7e-08 62.4 74 40.5
QL10p052856 Quercus lobata HOM05D006282 ORTHO05D007460 1.7e-08 62.4 75 49.3
PGSC0003DMG400014649 Solanum tuberosum HOM05D006282 ORTHO05D007460 2.3e-08 62.0 67 49.3
CiPaw.01G172700 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.0e-08 61.6 76 46.1
QL10p052834 Quercus lobata HOM05D006282 ORTHO05D007460 3.9e-08 61.2 72 51.4
arahy.Tifrunner.gnm1.ann1.HGL526 Arachis hypogaea HOM05D006282 ORTHO05D007460 5.1e-08 60.8 46 63.0
PGSC0003DMG400006400 Solanum tuberosum HOM05D006282 ORTHO05D007460 5.1e-08 60.8 74 43.2
MELO3C032848.2 Cucumis melo HOM05D006282 ORTHO05D007460 6.6e-08 60.5 71 39.4
QL10p052897 Quercus lobata HOM05D006282 ORTHO05D007460 6.6e-08 60.5 72 50.0
Sopen04g030460 Solanum pennellii HOM05D006282 ORTHO05D007460 1.5e-07 59.3 67 50.7
TPR.G34185 Trifolium pratense HOM05D006282 ORTHO05D007460 1.5e-07 59.3 70 48.6
TPR.G34221 Trifolium pratense HOM05D006282 ORTHO05D007460 1.5e-07 59.3 70 48.6
Solyc04g076730.1 Solanum lycopersicum HOM05D006282 ORTHO05D007460 2.5e-07 58.5 68 48.5
Medtr4g068220 Medicago truncatula HOM05D006282 ORTHO05D007460 5.6e-07 57.4 71 45.1
Sed0000720 Sechium edule HOM05D006282 ORTHO05D007460 5.6e-07 57.4 65 43.1
Haze_01385 Corylus avellana HOM05D006282 ORTHO05D007460 7.3e-07 57.0 67 52.2
MBI07_g38404_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 7.3e-07 57.0 50 52.0
Nn1g09674 Nelumbo nucifera HOM05D006282 ORTHO05D007460 7.3e-07 57.0 72 47.2
QL10p053025 Quercus lobata HOM05D006282 ORTHO05D007460 7.3e-07 57.0 68 52.9
Glyma.11G124700 Glycine max HOM05D006282 ORTHO05D007460 1.2e-06 56.2 71 46.5
Cfa015233 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.6e-06 55.8 78 51.3
Glyma.12G049300 Glycine max HOM05D006282 ORTHO05D007460 1.6e-06 55.8 40 65.0
arahy.Tifrunner.gnm1.ann1.RU422H Arachis hypogaea HOM05D006282 ORTHO05D007460 2.1e-06 55.5 58 53.4
Cfa015255 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.1e-06 55.5 68 47.1
Migut.N03076 Erythranthe guttata HOM05D006282 ORTHO05D007460 2.1e-06 55.5 69 44.9
DCAR_023941 Daucus carota HOM05D006282 ORTHO05D007460 2.8e-06 55.1 67 46.3
Phvul.011G051600 Phaseolus vulgaris HOM05D006282 ORTHO05D007460 4.7e-06 54.3 40 65.0
QL10p053030 Quercus lobata HOM05D006282 ORTHO05D007460 6.2e-06 53.9 64 45.3


User provided reference genes

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