Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.016G098900 Populus trichocarpa HOM05D007534 ORTHO05D009540 3.3e-139 498.4 261 100.0
Sabra16G0099100 Salix brachista HOM05D007534 ORTHO05D009540 1.9e-126 456.1 261 87.4
TWI53G0173 Tripterygium wilfordii HOM05D007534 ORTHO05D009540 4.5e-96 355.1 255 74.1
Manes.09G065300 Manihot esculenta HOM05D007534 ORTHO05D009540 7.6e-96 354.4 261 70.5
Cpa.g.sc102.24 Carica papaya HOM05D007534 ORTHO05D009540 1.1e-91 340.5 210 82.4
Duzib093G0985 Durio zibethinus HOM05D007534 ORTHO05D009540 4.3e-91 338.6 260 68.8
COL.COLO4_26947 Corchorus olitorius HOM05D007534 ORTHO05D009540 7.4e-91 337.8 218 77.5
vmacro08785 Vaccinium macrocarpon HOM05D007534 ORTHO05D009540 1.3e-90 337.0 239 74.5
Thecc.05G068400 Theobroma cacao HOM05D007534 ORTHO05D009540 1.6e-90 336.7 203 82.8
Gohir.D01G204300 Gossypium hirsutum HOM05D007534 ORTHO05D009540 2.1e-90 336.3 208 80.8
CAN.G900.25 Capsicum annuum HOM05D007534 ORTHO05D009540 3.7e-90 335.5 200 83.5
Atru.chr8.1788 Acer truncatum HOM05D007534 ORTHO05D009540 6.3e-90 334.7 267 70.4
QL07p043071 Quercus lobata HOM05D007534 ORTHO05D009540 8.2e-90 334.3 222 75.7
CANSAT80G0853 Cannabis sativa HOM05D007534 ORTHO05D009540 1.4e-89 333.6 271 65.7
Gorai.002G246500 Gossypium raimondii HOM05D007534 ORTHO05D009540 1.8e-89 333.2 209 80.9
Oeu005026.1 Olea europaea HOM05D007534 ORTHO05D009540 4.1e-89 332.0 222 77.0
GSVIVG01033650001 Vitis vinifera HOM05D007534 ORTHO05D009540 9.0e-89 330.9 183 88.0
PGSC0003DMG400003865 Solanum tuberosum HOM05D007534 ORTHO05D009540 1.5e-88 330.1 197 82.7
TAR369G0058 Trochodendron aralioides HOM05D007534 ORTHO05D009540 2.0e-88 329.7 177 91.0
Eucgr.A01668 Eucalyptus grandis HOM05D007534 ORTHO05D009540 4.5e-88 328.6 194 83.5
Sc20g0005570 Simmondsia chinensis HOM05D007534 ORTHO05D009540 5.9e-88 328.2 234 73.5
ClCG04G009370 Citrullus lanatus HOM05D007534 ORTHO05D009540 7.6e-88 327.8 262 66.4
MSTRG.19184 Avicennia marina HOM05D007534 ORTHO05D009540 1.3e-87 327.0 238 71.0
AUR62042063 Chenopodium quinoa HOM05D007534 ORTHO05D009540 1.7e-87 326.6 243 70.4
Solyc09g008270.3 Solanum lycopersicum HOM05D007534 ORTHO05D009540 1.7e-87 326.6 188 85.6
Gohir.A01G213100 Gossypium hirsutum HOM05D007534 ORTHO05D009540 2.2e-87 326.2 205 80.0
Sopen09g003090 Solanum pennellii HOM05D007534 ORTHO05D009540 2.2e-87 326.2 177 89.8
arahy.Tifrunner.gnm1.ann1.39JB5J Arachis hypogaea HOM05D007534 ORTHO05D009540 6.5e-87 324.7 218 75.7
arahy.Tifrunner.gnm1.ann1.C885SU Arachis hypogaea HOM05D007534 ORTHO05D009540 6.5e-87 324.7 218 75.7
Nn2g13809 Nelumbo nucifera HOM05D007534 ORTHO05D009540 8.4e-87 324.3 216 77.8
MELO3C024472.2 Cucumis melo HOM05D007534 ORTHO05D009540 1.4e-86 323.6 267 66.3
CsaV3_6G039950 Cucumis sativus L. HOM05D007534 ORTHO05D009540 2.5e-86 322.8 239 69.9
Migut.J00648 Erythranthe guttata HOM05D007534 ORTHO05D009540 3.2e-86 322.4 218 76.6
HanXRQChr13g0400981 Helianthus annuus HOM05D007534 ORTHO05D009540 3.2e-86 322.4 240 70.4
SalBow3G3627 Salvia bowleyana HOM05D007534 ORTHO05D009540 5.5e-86 321.6 222 74.8
CiPaw.10G129000 Carya illinoinensis HOM05D007534 ORTHO05D009540 7.2e-86 321.2 204 78.4
Sed0017969 Sechium edule HOM05D007534 ORTHO05D009540 2.7e-85 319.3 192 82.8
Aqoxy1G01139 Aquilegia oxysepala HOM05D007534 ORTHO05D009540 3.5e-85 318.9 202 79.7
Lj2A120T45 Lonicera japonica HOM05D007534 ORTHO05D009540 4.6e-85 318.5 177 88.7
THA.LOC104807064 Tarenaya hassleriana HOM05D007534 ORTHO05D009540 4.6e-85 318.5 263 65.0
Carub.0004s1873 Capsella rubella HOM05D007534 ORTHO05D009540 6.1e-85 318.2 236 70.3
Dinv37321 Davidia involucrata HOM05D001037 ORTHO05D000888 6.1e-85 318.2 205 79.5
Ciclev10012507m.g Citrus clementina HOM05D007534 ORTHO05D009540 2.3e-84 316.2 268 65.7
SGA_v2.0_scaffold75G24837 Striga asiatica HOM05D007534 ORTHO05D009540 3.0e-84 315.8 245 69.4
Lsat_1_v5_gn_6_24941 Lactuca sativa HOM05D007534 ORTHO05D009540 8.7e-84 314.3 263 64.3
Haze_20525 Corylus avellana HOM05D007534 ORTHO05D009540 1.5e-83 313.5 193 80.3
Medtr1g063070 Medicago truncatula HOM05D007534 ORTHO05D009540 3.3e-83 312.4 190 81.1
BcaC02g11812 Brassica carinata HOM05D007534 ORTHO05D009540 5.7e-83 311.6 234 68.4
Rhsim04G0144000 Rhododendron simsii HOM05D007534 ORTHO05D009540 5.7e-83 311.6 288 62.5
Prupe.7G128600 Prunus persica HOM05D007534 ORTHO05D009540 7.4e-83 311.2 197 76.6
BcaB02g09324 Brassica carinata HOM05D007534 ORTHO05D009540 9.7e-83 310.8 235 68.5
Lj5g0014413 Lotus japonicus HOM05D007534 ORTHO05D009540 9.7e-83 310.8 188 81.9
Lalb_Chr06g0171761 Lupinus albus HOM05D007534 ORTHO05D009540 1.6e-82 310.1 193 80.3
Ca_28252_v3 Cicer arietinum L. HOM05D007534 ORTHO05D009540 2.8e-82 309.3 176 85.8
CARHR131340 Cardamine hirsuta HOM05D007534 ORTHO05D009540 8.2e-82 307.8 229 69.0
C04p11090 Brassica napus HOM05D007534 ORTHO05D009540 1.4e-81 307.0 230 69.6
AT2G36885 Arabidopsis thaliana HOM05D007534 ORTHO05D009540 1.8e-81 306.6 196 78.1
Glyma.13G141700 Glycine max HOM05D007534 ORTHO05D009540 1.8e-81 306.6 194 79.4
Psat6g074600 Pisum sativum HOM05D007534 ORTHO05D009540 1.8e-81 306.6 217 71.4
BraA05t19860Z Brassica rapa HOM05D007534 ORTHO05D009540 2.4e-81 306.2 194 77.8
AL4G33100 Arabidopsis lyrata HOM05D007534 ORTHO05D009540 4.1e-81 305.4 236 67.4
A05p08980 Brassica napus HOM05D007534 ORTHO05D009540 4.1e-81 305.4 177 84.2
BolC4t22757H Brassica oleracea HOM05D007534 ORTHO05D009540 6.9e-81 304.7 227 70.0
RcHm_v2.0_Chr3g0470401 Rosa chinensis HOM05D007534 ORTHO05D009540 1.2e-80 303.9 263 61.6
Nitab4.5_0000578g0110 Nicotiana tabacum HOM05D007534 ORTHO05D009540 2.6e-80 302.8 270 63.0
Cc06_g04320 Coffea canephora HOM05D007534 ORTHO05D009540 4.5e-80 302.0 187 80.2
Phvul.007G147900 Phaseolus vulgaris HOM05D007534 ORTHO05D009540 5.9e-80 301.6 189 79.9
Cfa017628 Carpinus fangiana HOM05D007534 ORTHO05D009540 2.2e-79 299.7 247 65.6
PSO266G0073 Papaver somniferum HOM05D007534 ORTHO05D009540 1.9e-78 296.6 265 63.8
ECA233G2496 Erigeron canadensis HOM05D007534 ORTHO05D009540 2.5e-78 296.2 177 80.8
Zm00001eb003080 Zea mays HOM05D007534 ORTHO05D009540 3.2e-78 295.8 181 78.5
Os03g0137600 Oryza sativa ssp. japonica HOM05D007534 ORTHO05D009540 3.6e-77 292.4 182 78.0
Actinidia32489 Actinidia chinensis HOM05D007534 ORTHO05D009540 4.6e-77 292.0 211 71.6
CDE09G0108 Ceratophyllum demersum HOM05D007534 ORTHO05D009540 1.7e-74 283.5 193 73.1
Sp4g19170 Schrenkiella parvula HOM05D007534 ORTHO05D009540 2.8e-74 282.7 186 75.8
Aa31LG5G22110 Aethionema arabicum HOM05D007534 ORTHO05D009540 1.8e-73 280.0 230 67.0
Hma1.2p1_0205F.1_g086900 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 1.8e-73 280.0 189 75.1
MD12G1110000 Malus domestica HOM05D007534 ORTHO05D009540 1.8e-73 280.0 158 84.2
ATR0723G005 Amborella trichopoda HOM05D007534 ORTHO05D009540 2.0e-72 276.6 208 67.3
Thhalv10017130m.g Eutrema salsugineum HOM05D007534 ORTHO05D009540 2.0e-72 276.6 192 74.5
Nitab4.5_0008624g0030 Nicotiana tabacum HOM05D007534 ORTHO05D009540 2.2e-71 273.1 270 56.7
Peaxi162Scf00847g00032 Petunia axillaris HOM05D007534 ORTHO05D009540 5.1e-68 261.9 192 69.8
Ah.15g092560 Amaranthus hybridus HOM05D007534 ORTHO05D009540 8.8e-68 261.2 175 75.4
EL10Ac7g16645 Beta vulgaris HOM05D007534 ORTHO05D009540 1.3e-66 257.3 274 54.7
Mapoly0049s0045 Marchantia polymorpha HOM05D007534 ORTHO05D009540 7.7e-64 248.1 214 59.8
AagrBONN_evm.TU.Sc2ySwM_117.1862 Anthoceros agrestis HOM05D007534 ORTHO05D009540 8.5e-63 244.6 171 71.3
Pp3c2_17450 Physcomitrium patens HOM05D007534 ORTHO05D009540 3.2e-62 242.7 199 61.8
CSS0046236 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D009540 1.0e-60 237.7 199 64.8
PGR004G0787 Punica granatum HOM05D007534 ORTHO05D009540 1.3e-58 230.7 144 79.2
Hma1.2p1_0828F.1_g225100 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 3.7e-58 229.2 130 85.4
TPR.G11259 Trifolium pratense HOM05D007534 ORTHO05D009540 4.8e-58 228.8 123 90.2
QL03p002371 Quercus lobata HOM05D007534 ORTHO05D009540 8.3e-50 201.4 168 66.1
unitig_22.g5100 Utricularia gibba HOM05D007534 ORTHO05D009540 2.4e-49 199.9 205 56.1
AUR62026915 Chenopodium quinoa HOM05D007534 ORTHO05D009540 5.0e-47 192.2 191 59.7
Cre02.g143450 Chlamydomonas reinhardtii HOM05D007534 ORTHO05D009540 9.8e-43 177.9 196 50.5
FAN15G1333 Fragaria x ananassa HOM05D007534 ORTHO05D009540 7.7e-40 168.3 94 83.0
MD04G1092000 Malus domestica HOM05D007534 ORTHO05D009540 2.2e-34 150.2 129 62.8
CSS0001990 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D012079 7.3e-30 135.2 75 88.0
ATR0680G419 Amborella trichopoda HOM05D007534 ORTHO05D009540 6.4e-26 122.1 65 87.7
Rhsim04G0142700 Rhododendron simsii HOM05D007534 ORTHO05D009540 4.4e-19 99.4 58 84.5
MD04G1092200 Malus domestica HOM05D007534 ORTHO05D009540 9.9e-11 71.6 96 45.8


User provided reference genes

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