Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.016G096900 Populus trichocarpa HOM05D007539 ORTHO05D009315 8.7e-125 450.3 222 100.0
Sabra16G0100100 Salix brachista HOM05D007539 ORTHO05D009315 2.2e-104 382.5 260 76.9
Manes.08G015800 Manihot esculenta HOM05D007539 ORTHO05D009315 7.0e-82 307.8 189 78.3
Thecc.05G075600 Theobroma cacao HOM05D007539 ORTHO05D009315 1.0e-80 303.9 166 85.5
Cfa016483 Carpinus fangiana HOM05D007539 ORTHO05D009315 5.0e-80 301.6 166 85.5
COL.COLO4_22255 Corchorus olitorius HOM05D007539 ORTHO05D009315 1.1e-79 300.4 236 66.5
Duzib093G0735 Durio zibethinus HOM05D007539 ORTHO05D009315 1.9e-79 299.7 173 83.2
Lj5g0010413 Lotus japonicus HOM05D007539 ORTHO05D009315 2.5e-79 299.3 165 84.2
Ciclev10009520m.g Citrus clementina HOM05D007539 ORTHO05D009315 2.1e-78 296.2 180 77.8
Nn2g13907 Nelumbo nucifera HOM05D007539 ORTHO05D009315 2.7e-78 295.8 180 81.1
Dinv37358 Davidia involucrata HOM05D007539 ORTHO05D009315 3.6e-78 295.4 232 66.4
TWI74G0011 Tripterygium wilfordii HOM05D007539 ORTHO05D009315 8.0e-78 294.3 228 66.7
Psat6g077160 Pisum sativum HOM05D007539 ORTHO05D009315 1.0e-77 293.9 199 72.9
VMungo0720G2140 Vigna mungo HOM05D007539 ORTHO05D009315 1.0e-77 293.9 164 82.9
QL07p041368 Quercus lobata HOM05D007539 ORTHO05D009315 1.8e-77 293.1 165 83.6
PGR142G1614 Punica granatum HOM05D007539 ORTHO05D009315 2.3e-77 292.7 165 83.0
Ca_11568_v3 Cicer arietinum L. HOM05D007539 ORTHO05D009315 3.0e-77 292.4 217 68.7
Phvul.007G226000 Phaseolus vulgaris HOM05D007539 ORTHO05D009315 8.8e-77 290.8 165 81.8
Sc20g0005850 Simmondsia chinensis HOM05D007539 ORTHO05D009315 8.8e-77 290.8 214 68.2
arahy.Tifrunner.gnm1.ann1.6XWD2H Arachis hypogaea HOM05D007539 ORTHO05D009315 1.1e-76 290.4 165 83.0
arahy.Tifrunner.gnm1.ann1.M3KAW1 Arachis hypogaea HOM05D007539 ORTHO05D009315 1.1e-76 290.4 165 83.0
TPR.G9909 Trifolium pratense HOM05D007539 ORTHO05D009315 1.1e-76 290.4 187 74.3
MELO3C009408.2 Cucumis melo HOM05D007539 ORTHO05D009315 1.5e-76 290.0 166 82.5
Gorai.009G410900 Gossypium raimondii HOM05D007539 ORTHO05D009315 2.6e-76 289.3 174 81.6
Prupe.7G122900 Prunus persica HOM05D007539 ORTHO05D009315 4.4e-76 288.5 169 80.5
Gohir.A04G068300 Gossypium hirsutum HOM05D007539 ORTHO05D009315 5.7e-76 288.1 175 81.1
Aqoxy4G02594 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 9.7e-76 287.3 195 73.3
Glyma.10G063500 Glycine max HOM05D007539 ORTHO05D009315 9.7e-76 287.3 165 81.2
Sopen10g035220 Solanum pennellii HOM05D007539 ORTHO05D009315 9.7e-76 287.3 187 73.8
PGSC0003DMG400008599 Solanum tuberosum HOM05D007539 ORTHO05D009315 1.3e-75 287.0 187 73.3
Cc06_g04790 Coffea canephora HOM05D007539 ORTHO05D009315 1.7e-75 286.6 187 75.4
MSTRG.10338 Avicennia marina HOM05D007539 ORTHO05D009315 2.2e-75 286.2 222 66.2
Gohir.D04G106800 Gossypium hirsutum HOM05D007539 ORTHO05D009315 6.3e-75 284.6 174 81.0
Cpa.g.sc5.125 Carica papaya HOM05D007539 ORTHO05D009315 3.1e-74 282.3 165 81.8
Solyc10g085820.2 Solanum lycopersicum HOM05D007539 ORTHO05D009315 3.1e-74 282.3 187 72.7
Ah.08g211220 Amaranthus hybridus HOM05D007539 ORTHO05D009315 4.1e-74 282.0 191 72.3
MD12G1102800 Malus domestica HOM05D007539 ORTHO05D009315 4.1e-74 282.0 193 72.0
Aqoxy2G01556 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 9.1e-74 280.8 166 81.3
EL10Ac7g16719 Beta vulgaris HOM05D007539 ORTHO05D009315 9.1e-74 280.8 173 76.3
Eucgr.K02422 Eucalyptus grandis HOM05D007539 ORTHO05D009315 9.1e-74 280.8 162 80.9
Sed0004549 Sechium edule HOM05D007539 ORTHO05D009315 9.1e-74 280.8 188 74.5
Lj2A124T70 Lonicera japonica HOM05D007539 ORTHO05D009315 1.6e-73 280.0 223 65.0
Eucgr.K02419 Eucalyptus grandis HOM05D007539 ORTHO05D009315 2.0e-73 279.6 174 77.0
CAN.G729.5 Capsicum annuum HOM05D007539 ORTHO05D009315 2.7e-73 279.3 165 78.8
Peaxi162Scf00146g00014 Petunia axillaris HOM05D007539 ORTHO05D009315 3.5e-73 278.9 196 70.4
RcHm_v2.0_Chr3g0471301 Rosa chinensis HOM05D007539 ORTHO05D009315 4.5e-73 278.5 219 66.7
SalBow5G4705 Salvia bowleyana HOM05D007539 ORTHO05D009315 4.5e-73 278.5 166 75.9
Migut.L01732 Erythranthe guttata HOM05D007539 ORTHO05D009315 5.9e-73 278.1 225 63.6
Nitab4.5_0009839g0010 Nicotiana tabacum HOM05D007539 ORTHO05D009315 7.7e-73 277.7 221 66.1
Actinidia39861 Actinidia chinensis HOM05D007539 ORTHO05D009315 1.3e-72 276.9 187 73.8
Medtr1g062250 Medicago truncatula HOM05D007539 ORTHO05D009315 1.7e-72 276.6 202 69.3
HanXRQChr08g0218701 Helianthus annuus HOM05D007539 ORTHO05D009315 2.9e-72 275.8 168 77.4
BcaB01g05802 Brassica carinata HOM05D007539 ORTHO05D009315 5.0e-72 275.0 223 64.1
MBI11_g41953_MAGBIO Magnolia biondii HOM05D007539 ORTHO05D009315 1.9e-71 273.1 191 69.6
GSVIVG01033714001 Vitis vinifera HOM05D007539 ORTHO05D009315 2.5e-71 272.7 187 71.7
CARHR209760 Cardamine hirsuta HOM05D007539 ORTHO05D009315 4.2e-71 271.9 176 72.7
Os08g0560600 Oryza sativa ssp. japonica HOM05D007539 ORTHO05D009315 4.2e-71 271.9 180 70.6
unitig_8.g4721 Utricularia gibba HOM05D007539 ORTHO05D009315 1.2e-70 270.4 188 68.1
Oeu045245.1 Olea europaea HOM05D007539 ORTHO05D009315 2.7e-70 269.2 222 64.0
AUR62042699 Chenopodium quinoa HOM05D007539 ORTHO05D009315 4.7e-70 268.5 171 73.1
FAN05G2086 Fragaria x ananassa HOM05D007539 ORTHO05D009315 4.7e-70 268.5 188 71.8
CsaV3_3G036460 Cucumis sativus L. HOM05D007539 ORTHO05D009315 1.4e-69 266.9 189 71.4
Thhalv10014552m.g Eutrema salsugineum HOM05D007539 ORTHO05D009315 1.4e-69 266.9 212 63.7
CANSAT80G1421 Cannabis sativa HOM05D007539 ORTHO05D009315 3.0e-69 265.8 171 77.8
FvH4_6g17220 Fragaria vesca HOM05D007539 ORTHO05D009315 3.0e-69 265.8 225 63.1
FAN05G5748 Fragaria x ananassa HOM05D007539 ORTHO05D009315 5.2e-69 265.0 166 77.1
Zm00001eb175880 Zea mays HOM05D007539 ORTHO05D009315 1.5e-68 263.5 164 73.8
FAN14G0473 Fragaria x ananassa HOM05D007539 ORTHO05D009315 2.6e-68 262.7 225 62.2
FAN02G2576 Fragaria x ananassa HOM05D007539 ORTHO05D009315 7.5e-68 261.2 225 62.2
ECA238G4618 Erigeron canadensis HOM05D007539 ORTHO05D009315 1.3e-67 260.4 169 74.6
A03p01240 Brassica napus HOM05D007539 ORTHO05D009315 1.7e-67 260.0 180 70.0
HPP92_014788 Vanilla planifolia HOM05D007539 ORTHO05D009315 4.8e-67 258.5 161 75.2
CiPaw.09G005200 Carya illinoinensis HOM05D007539 ORTHO05D009315 1.8e-66 256.5 137 88.3
Lalb_Chr02g0155351 Lupinus albus HOM05D007539 ORTHO05D009315 1.8e-66 256.5 147 81.0
Rhsim03G0085100 Rhododendron simsii HOM05D007539 ORTHO05D009315 3.1e-66 255.8 237 59.5
PSO339G1895 Papaver somniferum HOM05D007539 ORTHO05D009315 5.4e-66 255.0 214 61.2
SGA_v2.0_scaffold224G42914 Striga asiatica HOM05D007539 ORTHO05D009315 5.4e-66 255.0 189 66.7
CDE02G3922 Ceratophyllum demersum HOM05D007539 ORTHO05D009315 1.6e-65 253.4 204 63.2
ATR0950G005 Amborella trichopoda HOM05D007539 ORTHO05D009315 6.5e-64 248.1 214 58.4
Glyma.13G148000 Glycine max HOM05D007539 ORTHO05D009315 1.2e-62 243.8 138 81.2
vmacro07349 Vaccinium macrocarpon HOM05D007539 ORTHO05D009315 1.4e-61 240.4 142 79.6
ClCG10G019640 Citrullus lanatus HOM05D007539 ORTHO05D009315 1.8e-61 240.0 141 80.9
Ah.12g063350 Amaranthus hybridus HOM05D007539 ORTHO05D009315 1.2e-60 237.3 139 77.0
TAR633G2614 Trochodendron aralioides HOM05D006793 ORTHO05D009315 4.4e-60 235.3 200 63.0
Nitab4.5_0000725g0080 Nicotiana tabacum HOM05D007539 ORTHO05D009315 2.4e-58 229.6 256 52.0
BolC3t12712H Brassica oleracea HOM05D007539 ORTHO05D009315 3.1e-58 229.2 296 47.0
Aa31LG1G21630 Aethionema arabicum HOM05D007539 ORTHO05D009315 2.7e-57 226.1 148 72.3
C03p01600 Brassica napus HOM05D007539 ORTHO05D009315 2.5e-55 219.5 193 60.6
BcaB01g05814 Brassica carinata HOM05D007539 ORTHO05D009315 7.3e-55 218.0 192 59.4
Lsat_1_v5_gn_2_18420 Lactuca sativa HOM05D007539 ORTHO05D009315 3.5e-49 199.1 122 74.6
Carub.0006s0239 Capsella rubella HOM05D007539 ORTHO05D009315 3.9e-48 195.7 123 73.2
AL6G13050 Arabidopsis lyrata HOM05D007539 ORTHO05D009315 5.0e-48 195.3 123 72.4
AUR62040192 Chenopodium quinoa HOM05D007539 ORTHO05D009315 1.5e-47 193.7 122 73.0
BraA03t09504Z Brassica rapa HOM05D007539 ORTHO05D009315 1.4e-42 177.2 214 46.3
AagrBONN_evm.TU.Sc2ySwM_117.3355 Anthoceros agrestis HOM05D007539 ORTHO05D009315 1.2e-41 174.1 191 46.6
Mapoly0014s0214 Marchantia polymorpha HOM05D007539 ORTHO05D009315 1.1e-39 167.5 210 46.7
FAN09G1910 Fragaria x ananassa HOM05D007539 ORTHO05D009315 1.9e-31 140.2 77 85.7
QL07p041388 Quercus lobata HOM05D007539 ORTHO05D009315 4.3e-31 139.0 74 83.8
CBR_g37238 Chara braunii HOM05D007539 ORTHO05D009315 1.3e-19 100.9 217 29.5
FAN13G0623 Fragaria x ananassa HOM05D002804 ORTHO05D003755 9.0e-13 78.2 119 48.7
CSS0027054 Camellia sinensis var. sinensis HOM05D021154 ORTHO05D009315 2.8e-06 56.6 80 52.5
CSS0032451 Camellia sinensis var. sinensis HOM05D021154 ORTHO05D009315 2.8e-06 56.6 98 44.9


User provided reference genes

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