Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.016G093500 Populus trichocarpa HOM05D006449 ORTHO05D007995 3.9e-66 254.6 123 100.0
Sabra16G0098600 Salix brachista HOM05D006449 ORTHO05D007995 9.5e-65 250.0 123 98.4
Manes.09G065800 Manihot esculenta HOM05D006449 ORTHO05D007995 1.6e-56 222.6 123 89.4
Nn2g13802 Nelumbo nucifera HOM05D006449 ORTHO05D007995 2.0e-54 215.7 123 87.0
CSS0028691 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 1.3e-53 213.0 123 85.4
Nn6g35286 Nelumbo nucifera HOM05D006449 ORTHO05D007995 1.7e-53 212.6 123 85.4
Actinidia08770 Actinidia chinensis HOM05D006449 ORTHO05D007995 2.2e-53 212.2 123 85.4
MSTRG.5764 Avicennia marina HOM05D006449 ORTHO05D007995 1.1e-52 209.9 123 82.9
Thecc.05G067500 Theobroma cacao HOM05D006449 ORTHO05D007995 1.1e-52 209.9 123 82.1
Duzib093G0849 Durio zibethinus HOM05D006449 ORTHO05D007995 2.4e-52 208.8 123 84.6
Glyma.13G142300 Glycine max HOM05D006449 ORTHO05D007995 3.2e-52 208.4 123 83.7
Gohir.D01G202200 Gossypium hirsutum HOM05D006449 ORTHO05D007995 5.4e-52 207.6 123 84.6
CsaV3_6G039970 Cucumis sativus L. HOM05D006449 ORTHO05D007995 7.1e-52 207.2 123 82.1
Hma1.2p1_0205F.1_g086990 Hydrangea macrophylla HOM05D006449 ORTHO05D007995 1.2e-51 206.5 123 84.6
Glyma.10G055200 Glycine max HOM05D006449 ORTHO05D007995 1.6e-51 206.1 123 82.1
Gorai.002G246900 Gossypium raimondii HOM05D006449 ORTHO05D007995 2.1e-51 205.7 123 83.7
PGR004G0793 Punica granatum HOM05D006449 ORTHO05D007995 2.1e-51 205.7 123 82.9
CiPaw.10G129500 Carya illinoinensis HOM05D006449 ORTHO05D007995 4.6e-51 204.5 121 80.2
Gohir.A01G213500 Gossypium hirsutum HOM05D006449 ORTHO05D007995 4.6e-51 204.5 123 83.7
Nitab4.5_0000814g0040 Nicotiana tabacum HOM05D006449 ORTHO05D007995 4.6e-51 204.5 122 81.1
Nitab4.5_0003861g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 7.8e-51 203.8 122 82.0
ClCG04G009390 Citrullus lanatus HOM05D006449 ORTHO05D007995 1.0e-50 203.4 123 79.7
TWI77G0881 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 1.3e-50 203.0 121 81.8
TWI74G0214 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 3.0e-50 201.8 121 81.0
VMungo0720G3134 Vigna mungo HOM05D006449 ORTHO05D007995 3.9e-50 201.4 123 80.5
HanXRQChr15g0491571 Helianthus annuus HOM05D006449 ORTHO05D007995 5.1e-50 201.1 123 80.5
Lj5g0001377 Lotus japonicus HOM05D006449 ORTHO05D007995 5.1e-50 201.1 123 81.3
Phvul.007G219000 Phaseolus vulgaris HOM05D006449 ORTHO05D007995 5.1e-50 201.1 123 80.5
Solyc09g008230.3 Solanum lycopersicum HOM05D006449 ORTHO05D007995 5.1e-50 201.1 122 80.3
Sopen09g003050 Solanum pennellii HOM05D006449 ORTHO05D007995 5.1e-50 201.1 122 80.3
GSVIVG01033644001 Vitis vinifera HOM05D006449 ORTHO05D007995 6.6e-50 200.7 123 81.3
Psat6g074040 Pisum sativum HOM05D006449 ORTHO05D007995 1.1e-49 199.9 123 78.9
PGSC0003DMG400003863 Solanum tuberosum HOM05D006449 ORTHO05D007995 1.1e-49 199.9 122 79.5
THA.LOC104823475 Tarenaya hassleriana HOM05D006449 ORTHO05D007995 1.1e-49 199.9 121 82.6
EL10Ac7g16636 Beta vulgaris HOM05D006449 ORTHO05D007995 1.9e-49 199.1 123 80.5
DCAR_015000 Daucus carota HOM05D006449 ORTHO05D007995 1.9e-49 199.1 123 79.7
Peaxi162Scf00311g00119 Petunia axillaris HOM05D006449 ORTHO05D007995 1.9e-49 199.1 122 79.5
CAN.G900.29 Capsicum annuum HOM05D006449 ORTHO05D007995 3.3e-49 198.4 122 78.7
Atru.chr8.1798 Acer truncatum HOM05D006449 ORTHO05D007995 4.3e-49 198.0 121 80.2
ECA248G0052 Erigeron canadensis HOM05D006449 ORTHO05D007995 4.3e-49 198.0 123 79.7
Ca_11505_v3 Cicer arietinum L. HOM05D006449 ORTHO05D007995 7.3e-49 197.2 123 78.9
Sed0015731 Sechium edule HOM05D006449 ORTHO05D007995 7.3e-49 197.2 123 76.4
Aqoxy1G01150 Aquilegia oxysepala HOM05D006449 ORTHO05D007995 9.6e-49 196.8 123 78.9
AUR62040339 Chenopodium quinoa HOM05D006449 ORTHO05D007995 1.3e-48 196.4 123 78.9
FAN05G0981 Fragaria x ananassa HOM05D006449 ORTHO05D007995 1.3e-48 196.4 123 78.9
FAN14G2797 Fragaria x ananassa HOM05D006449 ORTHO05D007995 1.3e-48 196.4 123 78.9
FAN14G3008 Fragaria x ananassa HOM05D006449 ORTHO05D007995 1.3e-48 196.4 123 78.9
Os08g0564500 Oryza sativa ssp. japonica HOM05D006449 ORTHO05D007995 1.3e-48 196.4 125 76.8
Medtr1g063190 Medicago truncatula HOM05D006449 ORTHO05D007995 1.6e-48 196.1 123 78.9
Peaxi162Scf00638g00414 Petunia axillaris HOM05D006449 ORTHO05D007995 1.6e-48 196.1 122 77.9
AUR62042508 Chenopodium quinoa HOM05D006449 ORTHO05D007995 2.1e-48 195.7 123 78.9
RcHm_v2.0_Chr3g0470301 Rosa chinensis HOM05D006449 ORTHO05D007995 2.1e-48 195.7 123 78.9
Oeu041490.2 Olea europaea HOM05D006449 ORTHO05D007995 3.6e-48 194.9 130 76.9
Zm00001eb038700 Zea mays HOM05D006449 ORTHO05D007995 3.6e-48 194.9 127 76.4
FvH4_6g16440 Fragaria vesca HOM05D006449 ORTHO05D007995 4.8e-48 194.5 122 77.9
FAN02G2429 Fragaria x ananassa HOM05D006449 ORTHO05D007995 6.2e-48 194.1 123 78.0
Hund26578 Selenicereus undatus HOM05D006449 ORTHO05D007995 6.2e-48 194.1 123 76.4
SEGI_04945 Sequoiadendron giganteum HOM05D006449 ORTHO05D007995 6.2e-48 194.1 119 77.3
Hund20380 Selenicereus undatus HOM05D006449 ORTHO05D007995 4.0e-47 191.4 123 75.6
CDE09G0874 Ceratophyllum demersum HOM05D006449 ORTHO05D007995 9.0e-47 190.3 123 78.0
Thhalv10017435m.g Eutrema salsugineum HOM05D006449 ORTHO05D007995 9.9e-46 186.8 118 78.0
TPR.G11267 Trifolium pratense HOM05D006449 ORTHO05D007995 2.2e-45 185.7 123 74.0
AT2G36930 Arabidopsis thaliana HOM05D006449 ORTHO05D007995 2.9e-45 185.3 119 76.5
BcaB01g03807 Brassica carinata HOM05D006449 ORTHO05D007995 2.9e-45 185.3 119 76.5
CSS0018897 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 2.9e-45 185.3 136 71.3
CARHR131400 Cardamine hirsuta HOM05D006449 ORTHO05D007995 2.9e-45 185.3 121 74.4
unitig_749.g14285 Utricularia gibba HOM05D006449 ORTHO05D007995 4.9e-45 184.5 122 75.4
A05p08950 Brassica napus HOM05D006449 ORTHO05D007995 8.4e-45 183.7 119 76.5
C04p11060 Brassica napus HOM05D006449 ORTHO05D007995 8.4e-45 183.7 119 76.5
BolC4t22754H Brassica oleracea HOM05D006449 ORTHO05D007995 8.4e-45 183.7 119 76.5
BraA05t19857Z Brassica rapa HOM05D006449 ORTHO05D007995 8.4e-45 183.7 119 76.5
AL4G33170 Arabidopsis lyrata HOM05D006449 ORTHO05D007995 1.4e-44 183.0 119 74.8
BcaB02g09320 Brassica carinata HOM05D006449 ORTHO05D007995 1.9e-44 182.6 119 75.6
BcaC02g11815 Brassica carinata HOM05D006449 ORTHO05D007995 1.9e-44 182.6 119 75.6
Sp4g19220 Schrenkiella parvula HOM05D006449 ORTHO05D007995 4.2e-44 181.4 119 75.6
A03p20330 Brassica napus HOM05D006449 ORTHO05D007995 9.3e-44 180.3 119 74.8
BraA03t11279Z Brassica rapa HOM05D006449 ORTHO05D007995 9.3e-44 180.3 119 74.8
Lsat_1_v5_gn_1_52340 Lactuca sativa HOM05D006449 ORTHO05D007995 9.3e-44 180.3 123 73.2
Sabra06G0098200 Salix brachista HOM05D006449 ORTHO05D007995 1.6e-43 179.5 94 93.6
BcaC01g05620 Brassica carinata HOM05D006449 ORTHO05D007995 2.1e-43 179.1 119 73.9
C03p23890 Brassica napus HOM05D006449 ORTHO05D007995 2.1e-43 179.1 119 73.9
BolC3t14781H Brassica oleracea HOM05D006449 ORTHO05D007995 2.1e-43 179.1 119 73.9
Carub.0004s1878 Capsella rubella HOM05D006449 ORTHO05D007995 2.1e-43 179.1 119 74.8
Aa31LG5G22150 Aethionema arabicum HOM05D006449 ORTHO05D007995 4.0e-39 164.9 121 69.4
Cfa017617 Carpinus fangiana HOM05D006449 ORTHO05D007995 1.3e-37 159.8 133 66.9
Rhsim03G0091200 Rhododendron simsii HOM05D006449 ORTHO05D007995 2.2e-37 159.1 94 84.0
SGA_v2.0_scaffold40G15520 Striga asiatica HOM05D006449 ORTHO05D007995 2.9e-37 158.7 94 80.9
Mapoly0185s0018 Marchantia polymorpha HOM05D006449 ORTHO05D007995 3.8e-37 158.3 121 64.5
SGA_v2.0_scaffold75G24848 Striga asiatica HOM05D006449 ORTHO05D007995 4.9e-37 157.9 119 67.2
HanXRQChr01g0027751 Helianthus annuus HOM05D006449 ORTHO05D007995 1.1e-36 156.8 94 80.9
Potri.006G124100 Populus trichocarpa HOM05D006449 ORTHO05D007995 1.4e-36 156.4 77 93.5
QL07p043219 Quercus lobata HOM05D006449 ORTHO05D007995 4.2e-36 154.8 90 82.2
Lalb_Chr02g0155801 Lupinus albus HOM05D006449 ORTHO05D007995 7.1e-36 154.1 91 82.4
COL.COLO4_26955 Corchorus olitorius HOM05D006449 ORTHO05D007995 6.0e-35 151.0 104 73.1
Pp3c13_22060 Physcomitrium patens HOM05D006449 ORTHO05D007995 1.3e-34 149.8 118 60.2
MELO3C024474.2 Cucumis melo HOM05D006449 ORTHO05D007995 2.3e-34 149.1 91 80.2
ATR0219G007 Amborella trichopoda HOM05D006449 ORTHO05D007995 6.7e-34 147.5 85 81.2
Sc20g0005520 Simmondsia chinensis HOM05D006449 ORTHO05D007995 6.7e-34 147.5 89 78.7
CANSAT80G0535 Cannabis sativa HOM05D006449 ORTHO05D007995 1.5e-33 146.4 91 78.0
Cc06_g04250 Coffea canephora HOM05D006449 ORTHO05D007995 1.5e-33 146.4 79 87.3
Ciclev10013228m.g Citrus clementina HOM05D006449 ORTHO05D007995 1.9e-33 146.0 87 80.5
Nitab4.5_0029554g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 2.5e-33 145.6 94 73.4
Migut.J00654 Erythranthe guttata HOM05D006449 ORTHO05D007995 3.3e-33 145.2 89 78.7
arahy.Tifrunner.gnm1.ann1.9GBJ25 Arachis hypogaea HOM05D006449 ORTHO05D007995 4.3e-33 144.8 89 75.3
arahy.Tifrunner.gnm1.ann1.D9FX9P Arachis hypogaea HOM05D006449 ORTHO05D007995 4.3e-33 144.8 89 75.3
Manes.08G011000 Manihot esculenta HOM05D006449 ORTHO05D007995 1.6e-32 142.9 100 75.0
MD12G1112600 Malus domestica HOM05D006449 ORTHO05D007995 4.8e-32 141.4 91 75.8
HPP92_025806 Vanilla planifolia HOM05D006449 ORTHO05D007995 2.4e-31 139.0 91 71.4
PSO063G3287 Papaver somniferum HOM05D006449 ORTHO05D007995 6.9e-31 137.5 118 62.7
PSO339G4301 Papaver somniferum HOM05D006449 ORTHO05D007995 6.9e-31 137.5 118 62.7
vmacro07293 Vaccinium macrocarpon HOM05D006449 ORTHO05D007995 1.2e-30 136.7 101 72.3
MD00G1155400 Malus domestica HOM05D006449 ORTHO05D007995 4.5e-30 134.8 91 72.5
Haze_20546 Corylus avellana HOM05D006449 ORTHO05D007995 1.0e-29 133.7 103 68.9
Oeu005023.1 Olea europaea HOM05D006449 ORTHO05D007995 1.3e-29 133.3 104 66.3
SMO144G0185 Selaginella moellendorffii HOM05D006449 ORTHO05D007995 5.1e-26 121.3 67 79.1
TAR633G1413 Trochodendron aralioides HOM05D002509 ORTHO05D002758 1.4e-20 103.2 54 87.0
Prupe.7G129700 Prunus persica HOM05D006449 ORTHO05D007995 3.0e-18 95.5 68 69.1
PRCOL_00003735 Prasinoderma coloniale HOM05D006449 ORTHO05D007995 6.3e-16 87.8 112 42.9
MCO09G543 Micromonas commoda HOM05D006449 ORTHO05D007995 1.1e-15 87.0 146 37.0
Cre17.g734628 Chlamydomonas reinhardtii HOM05D006449 ORTHO05D007995 7.7e-14 80.9 131 39.7
Lj3A986G82 Lonicera japonica HOM05D006449 ORTHO05D007995 7.7e-14 80.9 123 43.1
CBR_g8310 Chara braunii HOM05D006449 ORTHO05D007995 1.0e-13 80.5 118 40.7
HanXRQChr16g0526221 Helianthus annuus HOM05D006449 ORTHO05D007995 8.8e-10 67.4 30 93.3
MSTRG.19181 Avicennia marina HOM05D006449 ORTHO05D007995 5.7e-09 64.7 33 90.9
Thhalv10009663m.g Eutrema salsugineum HOM05D005081 ORTHO05D005506 2.6e-06 55.8 31 83.9


User provided reference genes

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