Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.016G093000 Populus trichocarpa HOM05D006702 ORTHO05D008540 3.3e-121 438.3 216 100.0
Sabra16G0098200 Salix brachista HOM05D006702 ORTHO05D008540 3.2e-55 219.2 216 56.5
Manes.09G067614 Manihot esculenta HOM05D006702 ORTHO05D008540 5.6e-52 208.4 216 57.9
TWI77G0937 Tripterygium wilfordii HOM05D006702 ORTHO05D008540 4.6e-46 188.7 217 55.8
Haze_20544 Corylus avellana HOM05D006702 ORTHO05D008540 2.3e-45 186.4 203 55.7
QL07p043496 Quercus lobata HOM05D006702 ORTHO05D008540 2.3e-45 186.4 230 53.0
QL07p043331 Quercus lobata HOM05D006702 ORTHO05D008540 6.6e-45 184.9 222 53.2
CiPaw.10G130200 Carya illinoinensis HOM05D006702 ORTHO05D008540 1.1e-44 184.1 165 59.4
Haze_20547 Corylus avellana HOM05D006702 ORTHO05D008540 1.1e-44 184.1 216 54.6
MELO3C024465.2 Cucumis melo HOM05D006702 ORTHO05D008540 2.5e-44 183.0 216 50.9
FvH4_6g16390 Fragaria vesca HOM05D006702 ORTHO05D008540 7.3e-44 181.4 146 65.8
FAN14G1896 Fragaria x ananassa HOM05D006702 ORTHO05D008540 7.3e-44 181.4 146 65.8
Gohir.A04G072000 Gossypium hirsutum HOM05D006702 ORTHO05D008540 7.3e-44 181.4 216 52.3
CsaV3_6G039890 Cucumis sativus L. HOM05D006702 ORTHO05D008540 1.6e-43 180.3 215 50.7
Duzib106G0264 Durio zibethinus HOM05D006702 ORTHO05D008540 1.6e-43 180.3 155 63.9
RcHm_v2.0_Chr3g0470251 Rosa chinensis HOM05D006702 ORTHO05D008540 1.6e-43 180.3 152 64.5
ClCG04G009300 Citrullus lanatus HOM05D006702 ORTHO05D008540 2.1e-43 179.9 219 50.2
CANSAT80G0135 Cannabis sativa HOM05D006702 ORTHO05D008540 6.2e-43 178.3 198 55.1
GSVIVG01025733001 Vitis vinifera HOM05D006702 ORTHO05D008540 8.1e-43 177.9 106 82.1
CiPaw.10G130000 Carya illinoinensis HOM05D006702 ORTHO05D008540 2.4e-42 176.4 173 55.5
FAN05G3937 Fragaria x ananassa HOM05D006702 ORTHO05D008540 2.4e-42 176.4 217 51.2
Gorai.009G414600 Gossypium raimondii HOM05D006702 ORTHO05D008540 3.1e-42 176.0 216 51.4
Phvul.007G219250 Phaseolus vulgaris HOM05D006702 ORTHO05D008540 5.2e-42 175.3 125 73.6
TWI53G0904 Tripterygium wilfordii HOM05D006702 ORTHO05D008540 2.6e-41 172.9 106 77.4
Prupe.6G232200 Prunus persica HOM05D006702 ORTHO05D008540 5.8e-41 171.8 209 51.2
Thecc.05G066700 Theobroma cacao HOM05D006702 ORTHO05D008540 7.6e-41 171.4 212 49.5
MD04G1093600 Malus domestica HOM05D006702 ORTHO05D008540 9.9e-41 171.0 196 51.5
CSS0007009 Camellia sinensis var. sinensis HOM05D006702 ORTHO05D008540 1.3e-40 170.6 143 64.3
Atru.chr8.1809 Acer truncatum HOM05D006702 ORTHO05D008540 1.7e-40 170.2 131 71.0
Ciclev10012549m.g Citrus clementina HOM05D006702 ORTHO05D008540 1.7e-40 170.2 188 53.7
Actinidia32493 Actinidia chinensis HOM05D006702 ORTHO05D008540 2.2e-40 169.9 143 63.6
Gohir.D04G110501 Gossypium hirsutum HOM05D006702 ORTHO05D008540 1.1e-39 167.5 97 81.4
Lalb_Chr06g0171741 Lupinus albus HOM05D006702 ORTHO05D008540 1.1e-39 167.5 134 65.7
VMungo0720G0934 Vigna mungo HOM05D006702 ORTHO05D008540 1.9e-39 166.8 95 83.2
CAN.G900.34 Capsicum annuum HOM05D006702 ORTHO05D008540 7.1e-39 164.9 161 57.1
Migut.L01703 Erythranthe guttata HOM05D006702 ORTHO05D008540 7.1e-39 164.9 124 67.7
Gorai.006G163300 Gossypium raimondii HOM05D006702 ORTHO05D008540 7.1e-39 164.9 155 60.0
Nitab4.5_0008928g0010 Nicotiana tabacum HOM05D006702 ORTHO05D008540 9.3e-39 164.5 138 63.0
Glyma.13G142500 Glycine max HOM05D006702 ORTHO05D008540 1.2e-38 164.1 113 72.6
Gohir.D09G142300 Gossypium hirsutum HOM05D006702 ORTHO05D008540 1.2e-38 164.1 155 59.4
Gohir.A09G146600 Gossypium hirsutum HOM05D006702 ORTHO05D008540 1.6e-38 163.7 148 62.2
Oeu045060.1 Olea europaea HOM05D006702 ORTHO05D008540 1.6e-38 163.7 150 61.3
Sed0024166 Sechium edule HOM05D006702 ORTHO05D008540 3.5e-38 162.5 129 66.7
Lj5g0016847 Lotus japonicus HOM05D006702 ORTHO05D008540 4.6e-38 162.2 132 63.6
Nitab4.5_0000578g0200 Nicotiana tabacum HOM05D006702 ORTHO05D008540 6.0e-38 161.8 138 60.9
Duzib128G1950 Durio zibethinus HOM05D006702 ORTHO05D008540 7.8e-38 161.4 90 82.2
PGR142G4417 Punica granatum HOM05D006702 ORTHO05D008540 1.0e-37 161.0 136 62.5
Eucgr.K02933 Eucalyptus grandis HOM05D006702 ORTHO05D008540 3.0e-37 159.5 95 75.8
Nn2g13794 Nelumbo nucifera HOM05D006702 ORTHO05D008540 3.0e-37 159.5 105 70.5
Nn2g13797 Nelumbo nucifera HOM05D006702 ORTHO05D008540 3.0e-37 159.5 105 70.5
Psat6g074160 Pisum sativum HOM05D006702 ORTHO05D008540 6.6e-37 158.3 144 59.7
Cpa.g.sc54.80 Carica papaya HOM05D006702 ORTHO05D008540 8.7e-37 157.9 201 48.3
Lj2P122T8 Lonicera japonica HOM05D006702 ORTHO05D008540 8.7e-37 157.9 89 80.9
CiPaw.09G172500 Carya illinoinensis HOM05D006702 ORTHO05D008540 1.5e-36 157.1 106 70.8
THA.LOC104823233 Tarenaya hassleriana HOM05D006702 ORTHO05D008540 1.5e-36 157.1 115 68.7
C03p01460 Brassica napus HOM05D006702 ORTHO05D008540 1.9e-36 156.8 144 59.0
Cc06_g04220 Coffea canephora HOM05D006702 ORTHO05D008540 1.9e-36 156.8 144 60.4
BcaB01g05844 Brassica carinata HOM05D006702 ORTHO05D008540 3.3e-36 156.0 144 59.0
BolC3t12702H Brassica oleracea HOM05D006702 ORTHO05D008540 3.3e-36 156.0 143 58.7
MSTRG.10321 Avicennia marina HOM05D006702 ORTHO05D008540 4.3e-36 155.6 167 53.9
ECA233G1636 Erigeron canadensis HOM05D006702 ORTHO05D008540 4.3e-36 155.6 109 67.0
Carub.0006s0219 Capsella rubella HOM05D006702 ORTHO05D008540 5.6e-36 155.2 155 55.5
Sp6g39370 Schrenkiella parvula HOM05D006702 ORTHO05D008540 5.6e-36 155.2 169 54.4
PSO339G3061 Papaver somniferum HOM05D006702 ORTHO05D008540 1.3e-35 154.1 164 54.9
DCAR_020817 Daucus carota HOM05D006702 ORTHO05D008540 2.1e-35 153.3 100 74.0
Thhalv10003274m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 2.1e-35 153.3 145 57.2
Solyc09g008190.3 Solanum lycopersicum HOM05D006702 ORTHO05D008540 2.1e-35 153.3 117 64.1
TPR.G11275 Trifolium pratense HOM05D006702 ORTHO05D008540 2.1e-35 153.3 143 57.3
Sopen09g002990 Solanum pennellii HOM05D006702 ORTHO05D008540 2.8e-35 152.9 111 66.7
Aa31LG1G21770 Aethionema arabicum HOM05D006702 ORTHO05D008540 3.6e-35 152.5 152 57.9
AL6G12700 Arabidopsis lyrata HOM05D006702 ORTHO05D008540 4.8e-35 152.1 139 59.0
Medtr1g063240 Medicago truncatula HOM05D006702 ORTHO05D008540 4.8e-35 152.1 121 66.1
PGSC0003DMG400003886 Solanum tuberosum HOM05D006702 ORTHO05D008540 6.2e-35 151.8 111 66.7
Sc02g0001610 Simmondsia chinensis HOM05D006702 ORTHO05D008540 1.4e-34 150.6 91 74.7
BraA03t09496Z Brassica rapa HOM05D006702 ORTHO05D008540 1.8e-34 150.2 143 56.6
EL10Ac7g16628 Beta vulgaris HOM05D006702 ORTHO05D008540 2.4e-34 149.8 112 65.2
TAR369G0293 Trochodendron aralioides HOM05D006702 ORTHO05D008540 2.4e-34 149.8 87 79.3
SGA_v2.0_scaffold224G42945 Striga asiatica HOM05D006702 ORTHO05D008540 3.1e-34 149.4 169 50.3
A03p01140 Brassica napus HOM05D000070 ORTHO05D001255 9.0e-34 147.9 141 56.0
AT5G03370 Arabidopsis thaliana HOM05D006702 ORTHO05D008540 1.2e-33 147.5 154 55.2
AUR62040349 Chenopodium quinoa HOM05D006702 ORTHO05D008540 2.6e-33 146.4 89 75.3
Ca_11502_v3 Cicer arietinum L. HOM05D006702 ORTHO05D008540 2.6e-33 146.4 100 70.0
Potri.006G124966 Populus trichocarpa HOM05D006702 ORTHO05D008540 3.4e-33 146.0 109 71.6
Aqoxy2G01772 Aquilegia oxysepala HOM05D006702 ORTHO05D008540 4.5e-33 145.6 94 75.5
CARHR209960 Cardamine hirsuta HOM05D006702 ORTHO05D008540 9.9e-33 144.4 131 60.3
CDE05G1201 Ceratophyllum demersum HOM05D006702 ORTHO05D008540 2.9e-32 142.9 99 70.7
AUR62042500 Chenopodium quinoa HOM05D006702 ORTHO05D008540 1.9e-31 140.2 97 68.0
ATR0171G014 Amborella trichopoda HOM05D006702 ORTHO05D008540 2.4e-31 139.8 91 71.4
Thhalv10014711m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 3.2e-31 139.4 179 47.5
Lsat_1_v5_gn_6_25081 Lactuca sativa HOM05D006702 ORTHO05D008540 3.2e-31 139.4 114 61.4
Thhalv10029095m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 4.2e-31 139.0 89 70.8
Lalb_Chr24g0398871 Lupinus albus HOM05D006702 ORTHO05D008540 5.4e-31 138.7 97 63.9
arahy.Tifrunner.gnm1.ann1.C2LQEN Arachis hypogaea HOM05D006702 ORTHO05D008540 1.8e-29 133.7 74 86.5
arahy.Tifrunner.gnm1.ann1.NQ6TBI Arachis hypogaea HOM05D006702 ORTHO05D008540 1.8e-29 133.7 74 86.5
Hund25533 Selenicereus undatus HOM05D006702 ORTHO05D008540 1.8e-29 133.7 149 55.0
Hma1.2p1_0205F.1_g087030 Hydrangea macrophylla HOM05D006702 ORTHO05D008540 2.3e-29 133.3 75 85.3
DCAR_014995 Daucus carota HOM05D006702 ORTHO05D008540 3.9e-29 132.5 95 66.3
CAN.G900.33 Capsicum annuum HOM05D006702 ORTHO05D008540 2.4e-26 123.2 98 61.2
Peaxi162Scf01139g00005 Petunia axillaris HOM05D006702 ORTHO05D008540 5.3e-26 122.1 93 63.4
CARHR118060 Cardamine hirsuta HOM05D006702 ORTHO05D008540 2.0e-25 120.2 89 61.8
Nitab4.5_0008928g0020 Nicotiana tabacum HOM05D006702 ORTHO05D008540 1.7e-24 117.1 98 59.2
SEGI_37807 Sequoiadendron giganteum HOM05D006702 ORTHO05D008540 1.7e-24 117.1 119 56.3
Os06g0264700 Oryza sativa ssp. japonica HOM05D006702 ORTHO05D008540 3.2e-23 112.8 103 60.2
Zm00001eb380050 Zea mays HOM05D006702 ORTHO05D008540 4.2e-23 112.5 115 56.5
unitig_0.g683 Utricularia gibba HOM05D006702 ORTHO05D008540 5.5e-23 112.1 150 49.3
Mapoly0013s0202 Marchantia polymorpha HOM05D006702 ORTHO05D008540 1.3e-21 107.5 92 54.3
SMO137G0384 Selaginella moellendorffii HOM05D006702 ORTHO05D008540 2.5e-20 103.2 87 55.2
AagrBONN_evm.TU.Sc2ySwM_368.2290 Anthoceros agrestis HOM05D006702 ORTHO05D008540 4.3e-20 102.4 75 62.7
Zm00001eb380040 Zea mays HOM05D006702 ORTHO05D008540 3.7e-19 99.4 105 54.3
Pp3c18_4750 Physcomitrium patens HOM05D006702 ORTHO05D008540 8.1e-19 98.2 89 52.8
AagrBONN_evm.TU.Sc2ySwM_362.139 Anthoceros agrestis HOM05D006702 ORTHO05D008540 1.8e-18 97.1 109 45.0
Pp3c1_15300 Physcomitrium patens HOM05D006702 ORTHO05D008540 7.6e-17 91.7 93 45.2
FAN02G1423 Fragaria x ananassa HOM05D006702 ORTHO05D008540 1.3e-13 80.9 157 41.4
FAN05G1090 Fragaria x ananassa HOM05D006702 ORTHO05D008540 1.3e-13 80.9 157 41.4
Sabra06G0098700 Salix brachista HOM05D000002 ORTHO05D000047 8.2e-11 71.6 50 72.0
Pp3c5_16270 Physcomitrium patens HOM05D006702 ORTHO05D008540 1.8e-10 70.5 95 36.8
MSTRG.19178 Avicennia marina HOM05D006702 ORTHO05D008540 3.1e-10 69.7 136 38.2
CDE05G1088 Ceratophyllum demersum HOM05D006702 ORTHO05D008540 9.0e-10 68.2 40 77.5


User provided reference genes

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