Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.016G092300 Populus trichocarpa HOM05D006544 ORTHO05D008757 3.3e-124 448.4 221 100.0
Sabra16G0097900 Salix brachista HOM05D006544 ORTHO05D008757 4.5e-105 384.8 315 67.3
TAR636G3123 Trochodendron aralioides HOM05D006544 ORTHO05D008757 3.8e-96 355.1 227 79.7
Thecc.05G065700 Theobroma cacao HOM05D006544 ORTHO05D008757 1.4e-95 353.2 205 84.9
TWI74G1602 Tripterygium wilfordii HOM05D006544 ORTHO05D008757 2.5e-95 352.4 228 79.8
Duzib093G0756 Durio zibethinus HOM05D006544 ORTHO05D008757 1.2e-94 350.1 206 85.0
QL07p043583 Quercus lobata HOM05D006544 ORTHO05D008757 4.6e-94 348.2 200 84.5
Ciclev10012670m.g Citrus clementina HOM05D006544 ORTHO05D008757 7.9e-94 347.4 218 78.9
Manes.09G066600 Manihot esculenta HOM05D006544 ORTHO05D008757 7.9e-94 347.4 227 79.3
Gohir.A09G147100 Gossypium hirsutum HOM05D006544 ORTHO05D008757 3.0e-93 345.5 214 81.8
Nn2g11585 Nelumbo nucifera HOM05D006544 ORTHO05D008757 1.1e-92 343.6 227 78.9
PGSC0003DMG400010472 Solanum tuberosum HOM05D006544 ORTHO05D008757 2.5e-92 342.4 221 76.9
Gohir.D09G142700 Gossypium hirsutum HOM05D006544 ORTHO05D008757 1.3e-91 340.1 208 81.2
MBI18_g04983_MAGBIO Magnolia biondii HOM05D006544 ORTHO05D008757 1.3e-91 340.1 196 82.1
CiPaw.09G172700 Carya illinoinensis HOM05D006544 ORTHO05D008757 1.6e-91 339.7 218 78.0
GSVIVG01025731001 Vitis vinifera HOM05D006544 ORTHO05D008757 2.8e-91 339.0 223 76.7
Actinidia28904 Actinidia chinensis HOM05D006544 ORTHO05D008757 6.3e-91 337.8 189 84.7
Thhalv10014610m.g Eutrema salsugineum HOM05D006544 ORTHO05D008757 1.8e-90 336.3 226 77.0
CAN.G1169.17 Capsicum annuum HOM05D006544 ORTHO05D008757 3.1e-90 335.5 223 76.2
Nitab4.5_0000063g0030 Nicotiana tabacum HOM05D006544 ORTHO05D008757 3.1e-90 335.5 222 76.1
Solyc10g084040.2 Solanum lycopersicum HOM05D006544 ORTHO05D008757 3.1e-90 335.5 222 76.6
Dinv37314 Davidia involucrata HOM05D006544 ORTHO05D008757 6.9e-90 334.3 223 76.7
Sp6g39380 Schrenkiella parvula HOM05D006544 ORTHO05D008757 6.9e-90 334.3 182 87.9
RcHm_v2.0_Chr3g0470171 Rosa chinensis HOM05D006544 ORTHO05D008757 1.2e-89 333.6 224 77.2
Sopen10g033470 Solanum pennellii HOM05D006544 ORTHO05D008757 2.0e-89 332.8 220 77.3
AL8G27480 Arabidopsis lyrata HOM05D006544 ORTHO05D008757 3.4e-89 332.0 214 76.6
ClCG04G009280 Citrullus lanatus HOM05D006544 ORTHO05D008757 3.4e-89 332.0 227 74.0
MD12G1113500 Malus domestica HOM05D006544 ORTHO05D008757 3.4e-89 332.0 203 79.3
BcaC03g13011 Brassica carinata HOM05D006544 ORTHO05D008757 5.9e-89 331.3 181 89.0
Sed0018427 Sechium edule HOM05D006544 ORTHO05D008757 5.9e-89 331.3 228 74.6
AT5G52970 Arabidopsis thaliana HOM05D006544 ORTHO05D008757 7.6e-89 330.9 214 76.6
Cfa017605 Carpinus fangiana HOM05D006544 ORTHO05D008757 7.6e-89 330.9 225 76.0
Gorai.006G164200 Gossypium raimondii HOM05D006544 ORTHO05D008757 7.6e-89 330.9 219 78.1
Carub.0008s1316 Capsella rubella HOM05D006544 ORTHO05D008757 1.3e-88 330.1 197 81.7
Aa31LG1G21780 Aethionema arabicum HOM05D006544 ORTHO05D008757 3.8e-88 328.6 177 88.7
BcaB05g21832 Brassica carinata HOM05D006544 ORTHO05D008757 5.0e-88 328.2 181 86.7
COL.COLO4_26969 Corchorus olitorius HOM05D006544 ORTHO05D008757 5.0e-88 328.2 254 69.7
THA.LOC104816347 Tarenaya hassleriana HOM05D006544 ORTHO05D008757 5.0e-88 328.2 194 79.9
Nitab4.5_0010279g0020 Nicotiana tabacum HOM05D006544 ORTHO05D008757 8.4e-88 327.4 249 68.7
HanXRQChr13g0401051 Helianthus annuus HOM05D006544 ORTHO05D008757 1.1e-87 327.0 184 85.3
PGR004G0128 Punica granatum HOM05D006544 ORTHO05D008757 1.1e-87 327.0 233 72.5
C02p01030 Brassica napus HOM05D006544 ORTHO05D008757 1.4e-87 326.6 182 88.5
CANSAT80G1747 Cannabis sativa HOM05D006544 ORTHO05D008757 2.5e-87 325.9 228 75.0
Lalb_Chr06g0171711 Lupinus albus HOM05D006544 ORTHO05D008757 2.5e-87 325.9 188 83.0
DCAR_020819 Daucus carota HOM05D006544 ORTHO05D008757 3.2e-87 325.5 189 81.5
FvH4_6g16320 Fragaria vesca HOM05D006544 ORTHO05D008757 3.2e-87 325.5 182 85.2
BolC2t06093H Brassica oleracea HOM05D006544 ORTHO05D008757 4.2e-87 325.1 182 87.9
Eucgr.A01683 Eucalyptus grandis HOM05D006544 ORTHO05D008757 7.2e-87 324.3 217 74.2
CsaV3_6G039870 Cucumis sativus L. HOM05D006544 ORTHO05D008757 9.3e-87 323.9 229 72.5
PSO339G0933 Papaver somniferum HOM05D006544 ORTHO05D008757 1.2e-86 323.6 218 75.7
FAN05G5519 Fragaria x ananassa HOM05D006544 ORTHO05D008757 4.6e-86 321.6 192 82.8
MELO3C024463.2 Cucumis melo HOM05D006544 ORTHO05D008757 1.8e-85 319.7 220 73.6
Lj5g0006333 Lotus japonicus HOM05D006544 ORTHO05D008757 1.8e-85 319.7 217 74.7
PSO801G0526 Papaver somniferum HOM05D006544 ORTHO05D008757 2.3e-85 319.3 182 83.5
Lsat_1_v5_gn_6_25121 Lactuca sativa HOM05D006544 ORTHO05D008757 3.9e-85 318.5 194 78.9
Sc02g0001640 Simmondsia chinensis HOM05D006544 ORTHO05D008757 1.1e-84 317.0 183 81.4
ECA233G4064 Erigeron canadensis HOM05D006544 ORTHO05D008757 1.5e-84 316.6 202 75.2
Glyma.10G056700 Glycine max HOM05D006544 ORTHO05D008757 1.5e-84 316.6 225 74.2
Oeu016983.1 Olea europaea HOM05D006544 ORTHO05D008757 1.9e-84 316.2 214 72.9
Cc06_g04210 Coffea canephora HOM05D006544 ORTHO05D008757 3.3e-84 315.5 184 82.1
FAN09G3810 Fragaria x ananassa HOM05D006544 ORTHO05D008757 4.3e-84 315.1 227 72.7
Phvul.007G219800 Phaseolus vulgaris HOM05D006544 ORTHO05D008757 3.7e-83 312.0 221 73.3
arahy.Tifrunner.gnm1.ann1.4P9CL0 Arachis hypogaea HOM05D006544 ORTHO05D008757 6.3e-83 311.2 222 72.1
arahy.Tifrunner.gnm1.ann1.8Z8BZM Arachis hypogaea HOM05D006544 ORTHO05D008757 6.3e-83 311.2 222 72.1
BraA02t04758Z Brassica rapa HOM05D006544 ORTHO05D008757 6.3e-83 311.2 181 83.4
SGA_v2.0_scaffold224G42946 Striga asiatica HOM05D006544 ORTHO05D008757 8.2e-83 310.8 213 72.8
CARHR265950 Cardamine hirsuta HOM05D006544 ORTHO05D008757 1.1e-82 310.5 194 77.3
Migut.L01701 Erythranthe guttata HOM05D006544 ORTHO05D008757 1.8e-82 309.7 226 70.4
CDE09G0170 Ceratophyllum demersum HOM05D006544 ORTHO05D008757 6.9e-82 307.8 222 67.6
Peaxi162Scf00311g00059 Petunia axillaris HOM05D006544 ORTHO05D008757 6.9e-82 307.8 242 66.9
unitig_578.g16041 Utricularia gibba HOM05D006544 ORTHO05D008757 1.2e-81 307.0 211 71.1
Psat6g072960 Pisum sativum HOM05D006544 ORTHO05D008757 2.0e-81 306.2 227 70.0
VMungo0720G1694 Vigna mungo HOM05D006544 ORTHO05D008757 2.6e-81 305.8 220 72.3
ATR1093G019 Amborella trichopoda HOM05D006544 ORTHO05D008757 3.4e-81 305.4 216 70.4
Ca_11495_v3 Cicer arietinum L. HOM05D006544 ORTHO05D008757 3.4e-81 305.4 188 79.3
Medtr1g063350 Medicago truncatula HOM05D006544 ORTHO05D008757 3.4e-81 305.4 177 83.6
SalBow5G2848 Salvia bowleyana HOM05D006544 ORTHO05D008757 4.5e-81 305.1 218 70.6
TPR.G11258 Trifolium pratense HOM05D006544 ORTHO05D008757 4.5e-81 305.1 222 71.2
EL10Ac7g16625 Beta vulgaris HOM05D006544 ORTHO05D008757 7.7e-81 304.3 185 79.5
Aqoxy2G01774 Aquilegia oxysepala HOM05D006544 ORTHO05D008757 3.8e-80 302.0 215 73.0
MSTRG.10320 Avicennia marina HOM05D006544 ORTHO05D008757 1.9e-79 299.7 195 72.3
HPP92_009890 Vanilla planifolia HOM05D006544 ORTHO05D008757 2.5e-79 299.3 177 80.2
vmacro07290 Vaccinium macrocarpon HOM05D006544 ORTHO05D008757 2.1e-78 296.2 163 87.1
Prupe.6G232400 Prunus persica HOM05D006544 ORTHO05D008757 2.7e-78 295.8 192 78.1
AUR62042496 Chenopodium quinoa HOM05D006544 ORTHO05D008757 6.1e-78 294.7 232 67.2
Lj2A122G33 Lonicera japonica HOM05D006544 ORTHO05D008757 1.0e-77 293.9 156 88.5
FAN14G3080 Fragaria x ananassa HOM05D006544 ORTHO05D008757 1.8e-77 293.1 166 85.5
AUR62040358 Chenopodium quinoa HOM05D006544 ORTHO05D008757 1.5e-76 290.0 160 85.0
SEGI_38453 Sequoiadendron giganteum HOM05D006544 ORTHO05D008757 3.3e-76 288.9 183 74.9
Ah.15g092510 Amaranthus hybridus HOM05D006544 ORTHO05D008757 3.7e-75 285.4 156 84.6
Zm00001eb088350 Zea mays HOM05D006544 ORTHO05D008757 5.3e-74 281.6 215 65.6
Rhsim03G0092100 Rhododendron simsii HOM05D006544 ORTHO05D008757 5.7e-68 261.5 237 59.1
Pp3c13_11800 Physcomitrium patens HOM05D006544 ORTHO05D008757 7.4e-68 261.2 167 75.4
Mapoly0064s0090 Marchantia polymorpha HOM05D006544 ORTHO05D008757 1.7e-67 260.0 173 70.5
SMO118G0079 Selaginella moellendorffii HOM05D006544 ORTHO05D008757 2.0e-65 253.1 147 78.9
Cpa.g.sc54.75 Carica papaya HOM05D006544 ORTHO05D008757 4.4e-60 235.3 118 91.5
AagrBONN_evm.TU.Sc2ySwM_228.4577 Anthoceros agrestis HOM05D006544 ORTHO05D008757 7.5e-60 234.6 157 72.0
SEGI_20985 Sequoiadendron giganteum HOM05D006544 ORTHO05D008757 3.5e-57 225.7 122 82.8
Cre15.g636050 Chlamydomonas reinhardtii HOM05D006544 ORTHO05D008757 1.0e-56 224.2 164 67.1
CBR_g11899 Chara braunii HOM05D006544 ORTHO05D008757 1.3e-56 223.8 194 55.2
AagrBONN_evm.TU.Sc2ySwM_344.816 Anthoceros agrestis HOM05D006544 ORTHO05D008757 8.8e-53 211.1 122 76.2
PRCOL_00002491 Prasinoderma coloniale HOM05D006544 ORTHO05D008757 2.8e-51 206.1 180 58.3
MCO09G250 Micromonas commoda HOM05D006544 ORTHO05D008757 4.5e-49 198.7 217 48.8
CSS0000889 Camellia sinensis var. sinensis HOM05D006544 ORTHO05D008757 4.0e-45 185.7 197 52.3
Cpa.g.sc4277.1 Carica papaya HOM05D006544 ORTHO05D008757 1.1e-42 177.6 115 75.7
Cpa.g.sc54.73 Carica papaya HOM05D006544 ORTHO05D008757 1.1e-42 177.6 115 75.7
Os07g0534000 Oryza sativa ssp. japonica HOM05D006544 ORTHO05D008757 1.8e-42 176.8 118 67.8
Lj5g0024591 Lotus japonicus HOM05D006544 ORTHO05D008757 4.1e-42 175.6 94 84.0
Medtr5g037320 Medicago truncatula HOM05D006544 ORTHO05D008757 8.0e-30 134.8 91 74.7
HPP92_009894 Vanilla planifolia HOM05D006544 ORTHO05D008757 2.4e-26 123.2 65 86.2
Hund20313 Selenicereus undatus HOM05D006544 ORTHO05D008757 2.0e-25 120.2 68 82.4
Cpa.g.sc54.74 Carica papaya HOM05D006544 ORTHO05D008757 8.9e-21 104.8 112 56.2
CBR_g20266 Chara braunii HOM05D006544 ORTHO05D021234 6.4e-19 98.6 133 36.1
AagrBONN_evm.TU.Sc2ySwM_368.258 Anthoceros agrestis HOM05D006544 ORTHO05D021234 4.1e-18 95.9 126 34.9
Nn2g13777 Nelumbo nucifera HOM05D006544 ORTHO05D008757 1.3e-16 90.9 62 71.0
SEGI_36386 Sequoiadendron giganteum HOM05D006544 ORTHO05D021234 5.6e-15 85.5 128 34.4
SalBow5G0971 Salvia bowleyana HOM05D008540 ORTHO05D009454 2.1e-14 83.6 47 74.5
HPP92_009893 Vanilla planifolia HOM05D006544 ORTHO05D008757 6.2e-14 82.0 57 73.7
Cre03.g154600 Chlamydomonas reinhardtii HOM05D006544 ORTHO05D021234 1.6e-09 67.4 170 27.6
MCO12G278 Micromonas commoda HOM05D006544 ORTHO05D021234 3.9e-08 62.8 121 26.4
MD04G1093800 Malus domestica HOM05D006544 ORTHO05D247365 2.5e-07 60.1 35 80.0


User provided reference genes

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