Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.016G092100 Populus trichocarpa HOM05D007373 ORTHO05D009192 2.6e-57 224.9 99 100.0
Sabra16G0097700 Salix brachista HOM05D007373 ORTHO05D009192 3.8e-56 221.1 99 98.0
Migut.J00499 Erythranthe guttata HOM05D007373 ORTHO05D009192 1.8e-50 202.2 99 84.8
Sed0025593 Sechium edule HOM05D007373 ORTHO05D009192 3.1e-50 201.4 100 86.0
Cc06_g04200 Coffea canephora HOM05D007373 ORTHO05D009192 1.6e-49 199.1 99 81.8
MD12G1113600 Malus domestica HOM05D007373 ORTHO05D009192 4.5e-49 197.6 100 86.0
Prupe.6G232500 Prunus persica HOM05D007373 ORTHO05D009192 4.5e-49 197.6 100 85.0
PGR004G1687 Punica granatum HOM05D007373 ORTHO05D009192 7.7e-49 196.8 100 85.0
ClCG10G020140 Citrullus lanatus HOM05D007373 ORTHO05D009192 1.0e-48 196.4 100 83.0
Thecc.05G065600 Theobroma cacao HOM05D007373 ORTHO05D009192 1.0e-48 196.4 100 85.0
GSVIVG01025730001 Vitis vinifera HOM05D007373 ORTHO05D009192 1.0e-48 196.4 100 84.0
QL07p043588 Quercus lobata HOM05D007373 ORTHO05D009192 1.3e-48 196.1 99 83.8
MD04G1093900 Malus domestica HOM05D007373 ORTHO05D009192 2.2e-48 195.3 100 84.0
Manes.08G010000 Manihot esculenta HOM05D007373 ORTHO05D009192 2.2e-48 195.3 99 83.8
TWI53G0924 Tripterygium wilfordii HOM05D007373 ORTHO05D009192 2.9e-48 194.9 99 79.8
Dinv35786 Davidia involucrata HOM05D007373 ORTHO05D009192 3.8e-48 194.5 99 81.8
CSS0040934 Camellia sinensis var. sinensis HOM05D007373 ORTHO05D009192 5.0e-48 194.1 98 84.7
Solyc09g008155.1 Solanum lycopersicum HOM05D007373 ORTHO05D009192 5.0e-48 194.1 100 82.0
Sopen09g002960 Solanum pennellii HOM05D007373 ORTHO05D009192 5.0e-48 194.1 100 82.0
PGSC0003DMG400003861 Solanum tuberosum HOM05D007373 ORTHO05D009192 5.0e-48 194.1 100 82.0
Eucgr.A01684 Eucalyptus grandis HOM05D007373 ORTHO05D009192 6.5e-48 193.7 100 83.0
CSS0019413 Camellia sinensis var. sinensis HOM05D007373 ORTHO05D009192 8.5e-48 193.4 98 84.7
Sc02g0001650 Simmondsia chinensis HOM05D007373 ORTHO05D009192 1.1e-47 193.0 100 83.0
Gohir.A09G147200 Gossypium hirsutum HOM05D007373 ORTHO05D009192 1.9e-47 192.2 100 82.0
Gohir.D09G142800 Gossypium hirsutum HOM05D007373 ORTHO05D009192 1.9e-47 192.2 100 82.0
Gorai.006G164300 Gossypium raimondii HOM05D007373 ORTHO05D009192 1.9e-47 192.2 100 82.0
AL3G21090 Arabidopsis lyrata HOM05D007373 ORTHO05D009192 2.5e-47 191.8 99 81.8
AT3G09860 Arabidopsis thaliana HOM05D007373 ORTHO05D009192 2.5e-47 191.8 99 81.8
EL10Ac7g16624 Beta vulgaris HOM05D007373 ORTHO05D009192 2.5e-47 191.8 99 78.8
Peaxi162Scf00701g00211 Petunia axillaris HOM05D007373 ORTHO05D009192 2.5e-47 191.8 100 81.0
TWI74G0510 Tripterygium wilfordii HOM05D007373 ORTHO05D009192 3.2e-47 191.4 99 79.8
CANSAT80G1991 Cannabis sativa HOM05D007373 ORTHO05D009192 4.2e-47 191.0 100 83.0
PSO017G7276 Papaver somniferum HOM05D007373 ORTHO05D009192 4.2e-47 191.0 99 77.8
PSO478G2855 Papaver somniferum HOM05D007373 ORTHO05D009192 4.2e-47 191.0 99 77.8
THA.LOC104816346 Tarenaya hassleriana HOM05D007373 ORTHO05D009192 5.5e-47 190.7 99 80.8
Atru.chr8.1817 Acer truncatum HOM05D007373 ORTHO05D009192 7.2e-47 190.3 98 82.7
CARHR084370 Cardamine hirsuta HOM05D007373 ORTHO05D009192 7.2e-47 190.3 99 80.8
BcaC05g29497 Brassica carinata HOM05D007373 ORTHO05D009192 9.4e-47 189.9 99 80.8
A05p39190 Brassica napus HOM05D007373 ORTHO05D009192 9.4e-47 189.9 99 80.8
C05p58240 Brassica napus HOM05D007373 ORTHO05D009192 9.4e-47 189.9 99 80.8
BolC5t34478H Brassica oleracea HOM05D007373 ORTHO05D009192 9.4e-47 189.9 99 80.8
BraA05t22708Z Brassica rapa HOM05D007373 ORTHO05D009192 9.4e-47 189.9 99 80.8
Carub.0003s0895 Capsella rubella HOM05D007373 ORTHO05D009192 9.4e-47 189.9 99 80.8
CiPaw.09G173000 Carya illinoinensis HOM05D007373 ORTHO05D009192 9.4e-47 189.9 98 81.6
Sp3g08200 Schrenkiella parvula HOM05D007373 ORTHO05D009192 9.4e-47 189.9 99 80.8
TAR629G0480 Trochodendron aralioides HOM05D007373 ORTHO05D009192 9.4e-47 189.9 100 79.0
COL.COLO4_26968 Corchorus olitorius HOM05D007373 ORTHO05D009192 1.2e-46 189.5 100 80.0
Thhalv10022256m.g Eutrema salsugineum HOM05D007373 ORTHO05D009192 2.7e-46 188.3 99 80.8
Nitab4.5_0002632g0030 Nicotiana tabacum HOM05D007373 ORTHO05D009192 3.6e-46 188.0 100 80.0
unitig_27.g25376 Utricularia gibba HOM05D007373 ORTHO05D009192 3.6e-46 188.0 99 78.8
CAN.G900.38 Capsicum annuum HOM05D007373 ORTHO05D009192 4.7e-46 187.6 100 80.0
BcaC05g29708 Brassica carinata HOM05D007373 ORTHO05D009192 8.0e-46 186.8 99 79.8
Lj5g0010566 Lotus japonicus HOM05D007373 ORTHO05D009192 8.0e-46 186.8 100 80.0
Ciclev10013190m.g Citrus clementina HOM05D007373 ORTHO05D009192 1.0e-45 186.4 100 80.0
TAR374G0263 Trochodendron aralioides HOM05D007373 ORTHO05D009192 1.0e-45 186.4 100 77.0
RcHm_v2.0_Chr3g0470161 Rosa chinensis HOM05D007373 ORTHO05D009192 1.8e-45 185.7 100 78.0
MBI16_g10844_MAGBIO Magnolia biondii HOM05D007373 ORTHO05D009192 2.3e-45 185.3 97 77.3
DCAR_020820 Daucus carota HOM05D007373 ORTHO05D009192 3.0e-45 184.9 99 75.8
CsaV3_3G035970 Cucumis sativus L. HOM05D007373 ORTHO05D009192 6.8e-45 183.7 99 76.8
Cfa017601 Carpinus fangiana HOM05D007373 ORTHO05D009192 8.8e-45 183.3 100 79.0
FvH4_6g16300 Fragaria vesca HOM05D007373 ORTHO05D009192 8.8e-45 183.3 100 79.0
FAN14G5019 Fragaria x ananassa HOM05D007373 ORTHO05D009192 8.8e-45 183.3 100 79.0
Phvul.007G219900 Phaseolus vulgaris HOM05D007373 ORTHO05D009192 8.8e-45 183.3 100 77.0
FAN02G4061 Fragaria x ananassa HOM05D007373 ORTHO05D009192 1.5e-44 182.6 100 78.0
Duzib128G1309 Durio zibethinus HOM05D007373 ORTHO05D009192 3.4e-44 181.4 100 77.0
Nn3g17468 Nelumbo nucifera HOM05D007373 ORTHO05D009192 4.4e-44 181.0 100 75.0
Peaxi162Scf00311g00515 Petunia axillaris HOM05D007373 ORTHO05D009192 5.7e-44 180.6 95 81.1
Glyma.10G056800 Glycine max HOM05D007373 ORTHO05D009192 9.8e-44 179.9 100 75.0
ATR0177G027 Amborella trichopoda HOM05D007373 ORTHO05D009192 2.8e-43 178.3 99 75.8
Lalb_Chr02g0155881 Lupinus albus HOM05D007373 ORTHO05D009192 3.7e-43 177.9 99 75.8
Lalb_Chr02g0155991 Lupinus albus HOM05D007373 ORTHO05D009192 3.7e-43 177.9 99 75.8
Lsat_1_v5_gn_6_25141 Lactuca sativa HOM05D007373 ORTHO05D009192 1.1e-42 176.4 100 72.0
ECA233G3432 Erigeron canadensis HOM05D007373 ORTHO05D009192 5.4e-42 174.1 100 71.0
Glyma.13G143300 Glycine max HOM05D007373 ORTHO05D009192 4.5e-41 171.0 97 72.2
CDE10G1255 Ceratophyllum demersum HOM05D007373 ORTHO05D009192 5.9e-41 170.6 98 72.4
CDE10G0795 Ceratophyllum demersum HOM05D007373 ORTHO05D009192 7.7e-41 170.2 98 72.4
HanXRQChr02g0051631 Helianthus annuus HOM05D007373 ORTHO05D009192 1.0e-40 169.9 100 70.0
HanXRQChr13g0401061 Helianthus annuus HOM05D007373 ORTHO05D009192 3.8e-40 167.9 100 69.0
Cpa.g.sc56.30 Carica papaya HOM05D007373 ORTHO05D009192 7.2e-39 163.7 88 80.7
Dinv37313 Davidia involucrata HOM05D007373 ORTHO05D009192 9.5e-39 163.3 85 82.4
Actinidia08775 Actinidia chinensis HOM05D007373 ORTHO05D009192 3.6e-38 161.4 99 64.6
Actinidia28903 Actinidia chinensis HOM05D007373 ORTHO05D009192 4.7e-38 161.0 99 64.6
Aqoxy3G03675 Aquilegia oxysepala HOM05D007373 ORTHO05D009192 2.3e-37 158.7 98 67.3
Duzib106G1098 Durio zibethinus HOM05D007373 ORTHO05D009192 6.8e-37 157.1 134 55.2
BolC1t05427H Brassica oleracea HOM05D007373 ORTHO05D009192 8.8e-37 156.8 87 75.9
AUR62040359 Chenopodium quinoa HOM05D007373 ORTHO05D009192 2.0e-36 155.6 100 70.0
AUR62042495 Chenopodium quinoa HOM05D007373 ORTHO05D009192 2.0e-36 155.6 100 70.0
Aa31LG3G2330 Aethionema arabicum HOM05D007373 ORTHO05D009192 2.6e-36 155.2 169 47.9
Medtr1g063360 Medicago truncatula HOM05D007373 ORTHO05D009192 8.3e-35 150.2 99 66.7
TPR.G6865 Trifolium pratense HOM05D007373 ORTHO05D009192 8.3e-35 150.2 98 66.3
SGA_v2.0_scaffold40G15517 Striga asiatica HOM05D007373 ORTHO05D009192 4.1e-34 147.9 110 58.2
Psat6g073000 Pisum sativum HOM05D007373 ORTHO05D009192 7.3e-31 137.1 99 60.6
Nitab4.5_0000578g0180 Nicotiana tabacum HOM05D007373 ORTHO05D009192 1.2e-30 136.3 71 81.7
Pp3c23_20900 Physcomitrium patens HOM05D007373 ORTHO05D009192 1.6e-25 119.4 101 55.4
Mapoly0091s0024 Marchantia polymorpha HOM05D007373 ORTHO05D009192 6.2e-22 107.5 101 51.5
BcaB04g21242 Brassica carinata HOM05D007373 ORTHO05D009192 4.0e-21 104.8 58 77.6
AagrBONN_evm.TU.Sc2ySwM_368.2821 Anthoceros agrestis HOM05D007373 ORTHO05D009192 1.5e-20 102.8 102 51.0
SEGI_18158 Sequoiadendron giganteum HOM05D007373 ORTHO05D009192 1.6e-17 92.8 100 43.0
Ah.15g092500 Amaranthus hybridus HOM05D007373 ORTHO05D009192 1.2e-12 76.6 37 86.5
Nn2g15280 Nelumbo nucifera HOM05D007373 ORTHO05D009192 4.4e-12 74.7 40 75.0
Atru.BG.127.p Acer truncatum HOM05D007373 ORTHO05D009192 1.7e-11 72.8 31 96.8
CBR_g23007 Chara braunii HOM05D007373 ORTHO05D009192 8.6e-08 60.5 88 36.4
Zm00001eb212440 Zea mays HOM05D007373 ORTHO05D009192 5.6e-07 57.8 75 34.7
Os03g0578200 Oryza sativa ssp. japonica HOM05D007373 ORTHO05D009192 7.3e-07 57.4 76 34.2
Zm00001eb061850 Zea mays HOM05D007373 ORTHO05D009192 1.2e-06 56.6 76 34.2


User provided reference genes

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