Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.016G090000 Populus trichocarpa HOM05D006467 ORTHO05D008012 1.0e-61 240.0 129 100.0
Potri.006G127800 Populus trichocarpa HOM05D006467 ORTHO05D008012 3.1e-58 228.4 129 93.0
Sabra16G0095600 Salix brachista HOM05D006467 ORTHO05D008012 4.5e-57 224.6 146 85.6
Manes.08G007300 Manihot esculenta HOM05D006467 ORTHO05D008012 1.3e-48 196.4 124 83.9
Sabra06G0100500 Salix brachista HOM05D006467 ORTHO05D008012 1.6e-46 189.5 171 64.9
TWI77G0724 Tripterygium wilfordii HOM05D006467 ORTHO05D008012 1.2e-38 163.3 128 66.4
RcHm_v2.0_Chr3g0469601 Rosa chinensis HOM05D006467 ORTHO05D008012 6.1e-38 161.0 124 69.4
Thecc.05G060700 Theobroma cacao HOM05D006467 ORTHO05D008012 1.8e-37 159.5 128 63.3
Hma1.2p1_0614F.1_g189470 Hydrangea macrophylla HOM05D006467 ORTHO05D008012 2.3e-37 159.1 126 64.3
Dinv35529 Davidia involucrata HOM05D006467 ORTHO05D008012 4.0e-37 158.3 125 66.4
Dinv35757 Davidia involucrata HOM05D006467 ORTHO05D008012 4.0e-37 158.3 126 65.1
FAN09G2873 Fragaria x ananassa HOM05D006467 ORTHO05D008012 6.8e-37 157.5 125 67.2
Prupe.6G236600 Prunus persica HOM05D006467 ORTHO05D008012 6.8e-37 157.5 125 66.4
GSVIVG01025685001 Vitis vinifera HOM05D006467 ORTHO05D008012 1.2e-36 156.8 111 73.0
QL07p044433 Quercus lobata HOM05D006467 ORTHO05D008012 1.5e-36 156.4 121 66.9
Atru.chr8.1867 Acer truncatum HOM05D006467 ORTHO05D008012 2.0e-36 156.0 129 60.5
Actinidia19675 Actinidia chinensis HOM05D006467 ORTHO05D008012 2.0e-36 156.0 126 63.5
Cfa017565 Carpinus fangiana HOM05D006467 ORTHO05D008012 2.0e-36 156.0 125 64.8
CiPaw.09G176000 Carya illinoinensis HOM05D006467 ORTHO05D008012 2.6e-36 155.6 125 66.4
Ciclev10013106m.g Citrus clementina HOM05D006467 ORTHO05D008012 4.4e-36 154.8 128 60.9
MD04G1097300 Malus domestica HOM05D006467 ORTHO05D008012 9.8e-36 153.7 127 66.1
AL4G33560 Arabidopsis lyrata HOM05D006467 ORTHO05D008012 2.8e-35 152.1 124 62.9
FAN02G4276 Fragaria x ananassa HOM05D006467 ORTHO05D008012 2.8e-35 152.1 125 65.6
FAN14G3947 Fragaria x ananassa HOM05D006467 ORTHO05D008012 2.8e-35 152.1 125 64.0
MD12G1118700 Malus domestica HOM05D006467 ORTHO05D008012 3.7e-35 151.8 129 65.1
Nn2g13105 Nelumbo nucifera HOM05D006467 ORTHO05D008012 8.3e-35 150.6 124 62.1
TAR369G0155 Trochodendron aralioides HOM05D006467 ORTHO05D008012 8.3e-35 150.6 124 64.5
TAR623G0732 Trochodendron aralioides HOM05D006467 ORTHO05D008012 8.3e-35 150.6 127 61.4
CSS0042234 Camellia sinensis var. sinensis HOM05D006467 ORTHO05D008012 1.8e-34 149.4 127 62.2
Duzib128G1557 Durio zibethinus HOM05D006467 ORTHO05D008012 3.1e-34 148.7 128 60.9
Gohir.D09G145300 Gossypium hirsutum HOM05D006467 ORTHO05D008012 5.4e-34 147.9 126 60.3
A03p20520 Brassica napus HOM05D006467 ORTHO05D008012 9.1e-34 147.1 126 60.3
C03p24120 Brassica napus HOM05D006467 ORTHO05D008012 9.1e-34 147.1 126 59.5
BraA03t11294Z Brassica rapa HOM05D006467 ORTHO05D008012 9.1e-34 147.1 126 60.3
BcaC01g06644 Brassica carinata HOM05D006467 ORTHO05D008012 1.6e-33 146.4 126 59.5
FvH4_6g15910 Fragaria vesca HOM05D006467 ORTHO05D008012 3.5e-33 145.2 132 60.6
Lj5g0010745 Lotus japonicus HOM05D006467 ORTHO05D008012 3.5e-33 145.2 128 62.5
Carub.0004s1909 Capsella rubella HOM05D006467 ORTHO05D008012 7.7e-33 144.1 124 59.7
Cpa.g.sc102.12 Carica papaya HOM05D006467 ORTHO05D008012 7.7e-33 144.1 126 60.3
BolC3t14804H Brassica oleracea HOM05D006467 ORTHO05D008012 1.0e-32 143.7 127 59.1
COL.COLO4_27023 Corchorus olitorius HOM05D006467 ORTHO05D008012 1.0e-32 143.7 146 56.2
Lj2A112T40 Lonicera japonica HOM05D006467 ORTHO05D008012 1.7e-32 142.9 119 63.9
Ca_11474_v3 Cicer arietinum L. HOM05D006467 ORTHO05D008012 2.3e-32 142.5 128 58.6
Thhalv10017389m.g Eutrema salsugineum HOM05D006467 ORTHO05D008012 2.3e-32 142.5 126 58.7
MELO3C009340.2 Cucumis melo HOM05D006467 ORTHO05D008012 2.9e-32 142.1 128 56.2
Sopen09g002640 Solanum pennellii HOM05D006467 ORTHO05D008012 2.9e-32 142.1 127 59.8
Peaxi162Scf00123g00014 Petunia axillaris HOM05D006467 ORTHO05D008012 5.0e-32 141.4 120 60.8
Glyma.13G140300 Glycine max HOM05D006467 ORTHO05D008012 8.6e-32 140.6 129 59.7
CsaV3_3G035800 Cucumis sativus L. HOM05D006467 ORTHO05D008012 1.1e-31 140.2 128 56.2
Glyma.10G053300 Glycine max HOM05D006467 ORTHO05D008012 1.1e-31 140.2 127 58.3
Gohir.A09G149400 Gossypium hirsutum HOM05D006467 ORTHO05D008012 1.1e-31 140.2 125 58.4
Sp4g19510 Schrenkiella parvula HOM05D006467 ORTHO05D008012 1.1e-31 140.2 126 57.1
PGSC0003DMG400021546 Solanum tuberosum HOM05D006467 ORTHO05D008012 1.1e-31 140.2 127 59.1
AT2G37195 Arabidopsis thaliana HOM05D006467 ORTHO05D008012 1.5e-31 139.8 126 57.9
Solyc09g007800.3 Solanum lycopersicum HOM05D006467 ORTHO05D008012 1.5e-31 139.8 127 58.3
Gohir.A04G074100 Gossypium hirsutum HOM05D006467 ORTHO05D008012 1.9e-31 139.4 123 59.3
Lsat_1_v5_gn_2_109060 Lactuca sativa HOM05D006467 ORTHO05D008012 2.5e-31 139.0 120 60.0
THA.LOC104823447 Tarenaya hassleriana HOM05D006467 ORTHO05D008012 2.5e-31 139.0 124 55.6
TPR.G21203 Trifolium pratense HOM05D006467 ORTHO05D008012 2.5e-31 139.0 128 59.4
Medtr1g064490 Medicago truncatula HOM05D006467 ORTHO05D008012 4.2e-31 138.3 127 59.1
PGR142G2369 Punica granatum HOM05D006467 ORTHO05D008012 4.2e-31 138.3 124 57.3
Gorai.006G166500 Gossypium raimondii HOM05D006467 ORTHO05D008012 5.5e-31 137.9 141 53.9
Oeu059967.1 Olea europaea HOM05D006467 ORTHO05D008012 5.5e-31 137.9 124 58.1
Gorai.009G417600 Gossypium raimondii HOM05D006467 ORTHO05D008012 7.2e-31 137.5 135 54.8
EL10Ac7g16554 Beta vulgaris HOM05D006467 ORTHO05D008012 9.5e-31 137.1 126 57.1
Nitab4.5_0003923g0010 Nicotiana tabacum HOM05D006467 ORTHO05D008012 2.1e-30 136.0 123 59.3
VMungo0720G0455 Vigna mungo HOM05D006467 ORTHO05D008012 2.1e-30 136.0 128 54.7
CANSAT80G0273 Cannabis sativa HOM05D006467 ORTHO05D008012 4.7e-30 134.8 124 58.1
AUR62033514 Chenopodium quinoa HOM05D006467 ORTHO05D008012 6.1e-30 134.4 129 56.6
ClCG10G020300 Citrullus lanatus HOM05D006467 ORTHO05D008012 6.1e-30 134.4 128 54.7
Aa31LG5G22520 Aethionema arabicum HOM05D006467 ORTHO05D008012 1.0e-29 133.7 126 54.8
CARHR131710 Cardamine hirsuta HOM05D006467 ORTHO05D008012 1.0e-29 133.7 128 56.2
Sc02g0001830 Simmondsia chinensis HOM05D006467 ORTHO05D008012 1.8e-29 132.9 125 56.8
HanXRQChr07g0195271 Helianthus annuus HOM05D006467 ORTHO05D008012 2.3e-29 132.5 121 57.9
Nitab4.5_0000101g0130 Nicotiana tabacum HOM05D006467 ORTHO05D008012 2.3e-29 132.5 123 56.1
PSO063G5019 Papaver somniferum HOM05D006467 ORTHO05D008012 3.0e-29 132.1 124 53.2
PSO339G1849 Papaver somniferum HOM05D006467 ORTHO05D008012 3.0e-29 132.1 124 53.2
vmacro20032 Vaccinium macrocarpon HOM05D006467 ORTHO05D008012 3.0e-29 132.1 160 49.4
ECA238G0062 Erigeron canadensis HOM05D006467 ORTHO05D008012 4.0e-29 131.7 120 55.8
MSTRG.19165 Avicennia marina HOM05D006467 ORTHO05D008012 5.2e-29 131.3 122 54.9
Phvul.007G220100 Phaseolus vulgaris HOM05D006467 ORTHO05D008012 5.2e-29 131.3 128 53.9
AUR62028561 Chenopodium quinoa HOM05D006467 ORTHO05D008012 8.8e-29 130.6 128 55.5
MBI07_g19293_MAGBIO Magnolia biondii HOM05D006467 ORTHO05D008012 1.5e-28 129.8 129 50.4
Nn2g10804 Nelumbo nucifera HOM05D006467 ORTHO05D008012 1.5e-28 129.8 119 57.1
Ah.15g092380 Amaranthus hybridus HOM05D006467 ORTHO05D008012 2.0e-28 129.4 129 54.3
Aqoxy1G01232 Aquilegia oxysepala HOM05D006467 ORTHO05D008012 2.0e-28 129.4 122 54.1
arahy.Tifrunner.gnm1.ann1.HNS49Q Arachis hypogaea HOM05D006467 ORTHO05D008012 2.6e-28 129.0 122 54.9
arahy.Tifrunner.gnm1.ann1.RH0WXQ Arachis hypogaea HOM05D006467 ORTHO05D008012 2.6e-28 129.0 122 54.9
arahy.Tifrunner.gnm1.ann1.VPUZ6C Arachis hypogaea HOM05D006467 ORTHO05D008012 2.6e-28 129.0 122 54.9
Lalb_Chr21g0314871 Lupinus albus HOM05D006467 ORTHO05D008012 2.6e-28 129.0 128 53.9
Sed0017827 Sechium edule HOM05D006467 ORTHO05D008012 7.5e-28 127.5 128 53.1
SGA_v2.0_scaffold40G15542 Striga asiatica HOM05D006467 ORTHO05D008012 7.5e-28 127.5 134 51.5
CAN.G888.4 Capsicum annuum HOM05D006467 ORTHO05D008012 2.8e-27 125.6 123 54.5
Migut.J00532 Erythranthe guttata HOM05D006467 ORTHO05D008012 1.4e-26 123.2 134 53.0
Gohir.D04G113200 Gossypium hirsutum HOM05D006467 ORTHO05D008012 9.2e-26 120.6 98 62.2
SalBow8G4982 Salvia bowleyana HOM05D006467 ORTHO05D008012 1.2e-25 120.2 123 52.0
Dinv37285 Davidia involucrata HOM05D006467 ORTHO05D008012 1.0e-24 117.1 82 69.5
Haze_20589 Corylus avellana HOM05D006467 ORTHO05D008012 2.9e-24 115.5 88 63.6
Cc06_g03930 Coffea canephora HOM05D006467 ORTHO05D008012 5.0e-24 114.8 109 54.1
Eucgr.K03249 Eucalyptus grandis HOM05D006467 ORTHO05D008012 3.3e-23 112.1 103 56.3
DCAR_009295 Daucus carota HOM05D006467 ORTHO05D008012 4.7e-22 108.2 76 65.8
HPP92_022407 Vanilla planifolia HOM05D006467 ORTHO05D008012 3.0e-21 105.5 129 45.7
HPP92_027503 Vanilla planifolia HOM05D006467 ORTHO05D008012 4.0e-21 105.1 129 45.0
Hund20246 Selenicereus undatus HOM05D006467 ORTHO05D008012 5.7e-20 101.3 80 61.2
Psat6g070840 Pisum sativum HOM05D006467 ORTHO05D008012 3.7e-19 98.6 74 64.9
Zm00001eb191980 Zea mays HOM05D006467 ORTHO05D008012 5.0e-16 88.2 122 41.8
unitig_27.g25371 Utricularia gibba HOM05D006467 ORTHO05D008012 1.1e-15 87.0 86 46.5
ATR0048G054 Amborella trichopoda HOM05D006467 ORTHO05D008012 3.3e-15 85.5 87 50.6
Os02g0805700 Oryza sativa ssp. japonica HOM05D006467 ORTHO05D008012 1.2e-14 83.6 126 38.1
FvH4_1g27957 Fragaria vesca HOM05D000871 ORTHO05D008012 1.6e-14 83.2 86 58.1
Zm00001eb258270 Zea mays HOM05D006467 ORTHO05D008012 8.0e-14 80.9 127 39.4
BcaC03g13318 Brassica carinata HOM05D006467 ORTHO05D008012 3.4e-12 75.5 95 45.3
BcaC03g13319 Brassica carinata HOM05D006467 ORTHO05D008012 3.4e-12 75.5 95 45.3
FvH4_1g28030 Fragaria vesca HOM05D000871 ORTHO05D008012 4.4e-12 75.1 66 63.6
C07p17010 Brassica napus HOM05D006467 ORTHO05D008012 1.9e-10 69.7 89 44.9
C02p04540 Brassica napus HOM05D006467 ORTHO05D008012 3.2e-10 68.9 89 44.9
C06p12980 Brassica napus HOM05D006467 ORTHO05D008012 1.6e-09 66.6 86 45.3
BolC1t01590H Brassica oleracea HOM05D006467 ORTHO05D008012 2.7e-09 65.9 89 43.8
BcaC08g43911 Brassica carinata HOM05D006467 ORTHO05D008012 1.5e-07 60.1 47 61.7
PSO063G7135 Papaver somniferum HOM05D000530 ORTHO05D000621 9.5e-07 57.4 40 65.0
FAN26G0965 Fragaria x ananassa HOM05D000871 ORTHO05D011596 4.7e-06 55.1 40 65.0


User provided reference genes

Program Settings