Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.016G084000 Populus trichocarpa HOM05D007368 ORTHO05D009330 5.9e-68 260.8 134 100.0
Prupe.6G242800 Prunus persica HOM05D007368 ORTHO05D009330 4.2e-42 174.9 113 76.1
Manes.08G002100 Manihot esculenta HOM05D007368 ORTHO05D009330 9.5e-42 173.7 109 78.0
Ciclev10013048m.g Citrus clementina HOM05D007368 ORTHO05D009330 1.2e-41 173.3 119 74.8
Duzib106G0389 Durio zibethinus HOM05D007368 ORTHO05D009330 2.8e-41 172.2 129 69.0
FAN05G3151 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.0e-40 170.2 122 73.0
Atru.chr8.2541 Acer truncatum HOM05D007368 ORTHO05D009330 1.4e-40 169.9 144 67.4
FAN02G4571 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.4e-40 169.9 126 71.4
FvH4_6g15150 Fragaria vesca HOM05D007368 ORTHO05D009330 4.0e-40 168.3 126 70.6
Sabra16G0091100 Salix brachista HOM05D007368 ORTHO05D009330 6.8e-40 167.5 90 90.0
GSVIVG01025542001 Vitis vinifera HOM05D007368 ORTHO05D009330 1.5e-39 166.4 143 65.0
PGR004G1717 Punica granatum HOM05D007368 ORTHO05D009330 2.0e-39 166.0 114 73.7
RcHm_v2.0_Chr3g0468451 Rosa chinensis HOM05D007368 ORTHO05D009330 2.0e-39 166.0 116 72.4
FAN09G3524 Fragaria x ananassa HOM05D007368 ORTHO05D009330 5.7e-39 164.5 123 71.5
TWI18G0236 Tripterygium wilfordii HOM05D007368 ORTHO05D009330 7.5e-39 164.1 117 70.9
MD12G1126200 Malus domestica HOM05D007368 ORTHO05D009330 9.8e-39 163.7 141 65.2
Peaxi162Scf00005g05110 Petunia axillaris HOM05D007368 ORTHO05D009330 9.8e-39 163.7 113 73.5
Thecc.05G052500 Theobroma cacao HOM05D007368 ORTHO05D009330 1.3e-38 163.3 140 64.3
CsaV3_3G035440 Cucumis sativus L. HOM05D007368 ORTHO05D009330 1.7e-38 162.9 132 65.2
Gohir.D04G116100 Gossypium hirsutum HOM05D007368 ORTHO05D009330 1.7e-38 162.9 133 66.2
Gohir.A04G077000 Gossypium hirsutum HOM05D007368 ORTHO05D009330 3.7e-38 161.8 133 66.2
Nitab4.5_0000848g0200 Nicotiana tabacum HOM05D007368 ORTHO05D009330 3.7e-38 161.8 138 65.9
Haze_20668 Corylus avellana HOM05D007368 ORTHO05D009330 6.4e-38 161.0 140 65.7
PSO384G2936 Papaver somniferum HOM05D007368 ORTHO05D009330 6.4e-38 161.0 138 59.4
Nn2g10623 Nelumbo nucifera HOM05D007368 ORTHO05D009330 8.3e-38 160.6 137 59.9
Eucgr.A01185 Eucalyptus grandis HOM05D007368 ORTHO05D009330 4.1e-37 158.3 143 62.2
MELO3C009303.2 Cucumis melo HOM05D007368 ORTHO05D009330 7.0e-37 157.5 108 69.4
FAN14G0355 Fragaria x ananassa HOM05D007368 ORTHO05D009330 7.0e-37 157.5 122 68.0
QL07p045528 Quercus lobata HOM05D007368 ORTHO05D009330 7.0e-37 157.5 123 68.3
TAR623G0445 Trochodendron aralioides HOM05D007368 ORTHO05D009330 9.2e-37 157.1 135 62.2
CSS0023324 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 1.2e-36 156.8 91 82.4
Cfa017494 Carpinus fangiana HOM05D007368 ORTHO05D009330 1.6e-36 156.4 140 64.3
Nitab4.5_0006316g0030 Nicotiana tabacum HOM05D007368 ORTHO05D009330 1.6e-36 156.4 113 71.7
PSO339G6044 Papaver somniferum HOM05D007368 ORTHO05D009330 2.7e-36 155.6 138 58.0
Lsat_1_v5_gn_2_109820 Lactuca sativa HOM05D007368 ORTHO05D009330 3.5e-36 155.2 142 62.0
SalBow4G2292 Salvia bowleyana HOM05D007368 ORTHO05D009330 5.9e-36 154.5 116 69.8
Sp5g08870 Schrenkiella parvula HOM05D007368 ORTHO05D009330 5.9e-36 154.5 126 63.5
THA.LOC104806520 Tarenaya hassleriana HOM05D007368 ORTHO05D009330 7.8e-36 154.1 127 62.2
RhsimUnG0119200 Rhododendron simsii HOM05D007368 ORTHO05D009330 1.3e-35 153.3 136 61.0
CANSAT80G2753 Cannabis sativa HOM05D007368 ORTHO05D009330 1.7e-35 152.9 91 81.3
HanXRQChr07g0195701 Helianthus annuus HOM05D007368 ORTHO05D009330 1.7e-35 152.9 133 62.4
Gorai.009G420700 Gossypium raimondii HOM05D007368 ORTHO05D009330 2.3e-35 152.5 158 55.7
Lalb_Chr01g0019071 Lupinus albus HOM05D007368 ORTHO05D009330 2.3e-35 152.5 107 69.2
EL10Ac7g17332 Beta vulgaris HOM05D007368 ORTHO05D009330 2.9e-35 152.1 122 63.9
SGA_v2.0_scaffold35G14174 Striga asiatica HOM05D007368 ORTHO05D009330 3.9e-35 151.8 137 57.7
AUR62002707 Chenopodium quinoa HOM05D007368 ORTHO05D009330 6.6e-35 151.0 90 80.0
Aqoxy4G03165 Aquilegia oxysepala HOM05D007368 ORTHO05D009330 8.6e-35 150.6 90 75.6
MBI05_g24570_MAGBIO Magnolia biondii HOM05D007368 ORTHO05D009330 8.6e-35 150.6 118 63.6
Os03g0285100 Oryza sativa ssp. japonica HOM05D007368 ORTHO05D009330 8.6e-35 150.6 117 66.7
C08p28830 Brassica napus HOM05D007368 ORTHO05D009330 3.3e-34 148.7 136 60.3
BcaC07g39711 Brassica carinata HOM05D007368 ORTHO05D009330 4.3e-34 148.3 136 60.3
ClCG10G020660 Citrullus lanatus HOM05D007368 ORTHO05D009330 4.3e-34 148.3 86 80.2
CARHR163370 Cardamine hirsuta HOM05D007368 ORTHO05D009330 7.3e-34 147.5 132 60.6
Thhalv10010814m.g Eutrema salsugineum HOM05D007368 ORTHO05D009330 1.6e-33 146.4 136 60.3
vmacro20068 Vaccinium macrocarpon HOM05D007368 ORTHO05D009330 1.6e-33 146.4 88 79.5
Aa31LG10G9720 Aethionema arabicum HOM05D007368 ORTHO05D009330 2.1e-33 146.0 97 71.1
Migut.L01655 Erythranthe guttata HOM05D007368 ORTHO05D009330 2.1e-33 146.0 90 76.7
A07p02830 Brassica napus HOM05D007368 ORTHO05D009330 2.8e-33 145.6 127 63.0
BraA07t28082Z Brassica rapa HOM05D007368 ORTHO05D009330 2.8e-33 145.6 127 63.0
A09p46480 Brassica napus HOM05D007368 ORTHO05D009330 3.6e-33 145.2 138 60.9
Carub.0005s2004 Capsella rubella HOM05D007368 ORTHO05D009330 8.0e-33 144.1 136 58.1
AL5G34390 Arabidopsis lyrata HOM05D007368 ORTHO05D009330 1.0e-32 143.7 136 58.1
Cpa.g.sc114.58 Carica papaya HOM05D007368 ORTHO05D009330 1.0e-32 143.7 99 70.7
Medtr7g100570 Medicago truncatula HOM05D007368 ORTHO05D009330 1.0e-32 143.7 137 58.4
AT3G53470 Arabidopsis thaliana HOM05D007368 ORTHO05D009330 1.4e-32 143.3 139 58.3
Lj1g0027781 Lotus japonicus HOM05D007368 ORTHO05D009330 1.4e-32 143.3 87 75.9
BolC8t50485H Brassica oleracea HOM05D007368 ORTHO05D009330 1.8e-32 142.9 140 59.3
BcaB01g00269 Brassica carinata HOM05D007368 ORTHO05D009330 2.3e-32 142.5 136 56.6
Zm00001eb039470 Zea mays HOM05D007368 ORTHO05D009330 1.2e-31 140.2 105 68.6
BraA09t40112Z Brassica rapa HOM05D007368 ORTHO05D009330 1.5e-31 139.8 142 59.9
Zm00001eb013060 Zea mays HOM05D007368 ORTHO05D009330 1.5e-31 139.8 111 63.1
Zm00001eb039440 Zea mays HOM05D007368 ORTHO05D009330 1.5e-31 139.8 114 64.9
Zm00001eb039540 Zea mays HOM05D007368 ORTHO05D009330 5.8e-31 137.9 114 64.0
Sc20g0004140 Simmondsia chinensis HOM05D007368 ORTHO05D009330 7.5e-31 137.5 92 72.8
BolC2t05999H Brassica oleracea HOM05D007368 ORTHO05D009330 9.8e-31 137.1 129 58.9
BcaC03g13096 Brassica carinata HOM05D007368 ORTHO05D009330 1.3e-30 136.7 131 58.0
Cc06_g03400 Coffea canephora HOM05D007368 ORTHO05D009330 1.3e-30 136.7 141 54.6
Glyma.03G177200 Glycine max HOM05D007368 ORTHO05D009330 1.7e-30 136.3 126 62.7
CSS0022034 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 2.2e-30 136.0 88 76.1
Medtr7g061255 Medicago truncatula HOM05D007368 ORTHO05D009330 2.2e-30 136.0 86 73.3
Glyma.19G177900 Glycine max HOM05D007368 ORTHO05D009330 2.9e-30 135.6 134 59.7
CDE07G1273 Ceratophyllum demersum HOM05D007368 ORTHO05D009330 3.7e-30 135.2 134 53.0
Psat3g046880 Pisum sativum HOM05D007368 ORTHO05D009330 4.9e-30 134.8 131 57.3
VMungo1383G1325 Vigna mungo HOM05D007368 ORTHO05D009330 8.3e-30 134.0 114 64.9
AUR62030166 Chenopodium quinoa HOM05D007368 ORTHO05D009330 1.6e-28 129.8 65 89.2
HPP92_003604 Vanilla planifolia HOM05D007368 ORTHO05D009330 3.5e-28 128.6 108 57.4
Phvul.001G174100 Phaseolus vulgaris HOM05D007368 ORTHO05D009330 1.0e-27 127.1 90 71.1
Sopen09g002110 Solanum pennellii HOM05D007368 ORTHO05D009330 3.0e-27 125.6 112 60.7
Dinv37241 Davidia involucrata HOM05D007368 ORTHO05D009330 5.0e-27 124.8 65 84.6
Solyc09g007240.3 Solanum lycopersicum HOM05D007368 ORTHO05D009330 1.1e-26 123.6 112 59.8
arahy.Tifrunner.gnm1.ann1.FER711 Arachis hypogaea HOM05D007368 ORTHO05D009330 3.3e-26 122.1 74 73.0
arahy.Tifrunner.gnm1.ann1.XWNT9U Arachis hypogaea HOM05D007368 ORTHO05D009330 4.7e-25 118.2 71 73.2
Actinidia11231 Actinidia chinensis HOM05D007368 ORTHO05D009330 6.8e-24 114.4 120 54.2
SEGI_06625 Sequoiadendron giganteum HOM05D007368 ORTHO05D009330 1.1e-21 107.1 91 54.9
CSS0036054 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 1.2e-20 103.6 88 62.5
Sed0014476 Sechium edule HOM05D007368 ORTHO05D009330 1.2e-20 103.6 103 54.4
ECA238G4406 Erigeron canadensis HOM05D001465 ORTHO05D001434 1.6e-17 93.2 91 52.7
Mapoly0019s0018 Marchantia polymorpha HOM05D007368 ORTHO05D009330 5.4e-13 78.2 114 42.1
TAR369G0858 Trochodendron aralioides HOM05D000391 ORTHO05D011523 2.3e-11 72.8 46 67.4
Pp3c5_6130 Physcomitrium patens HOM05D007368 ORTHO05D009330 2.5e-10 69.3 92 42.4
Sabra16G0091000 Salix brachista HOM05D007368 ORTHO05D009330 3.3e-10 68.9 45 86.7
SMO180G0004 Selaginella moellendorffii HOM05D007368 ORTHO05D009330 4.7e-09 65.1 80 38.8


User provided reference genes

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