Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.016G082100 Populus trichocarpa HOM05D005959 ORTHO05D007263 9.5e-145 516.9 280 100.0
Potri.006G215700 Populus trichocarpa HOM05D005959 ORTHO05D007263 2.2e-133 479.2 280 91.4
Sabra16G0089800 Salix brachista HOM05D005959 ORTHO05D007263 1.4e-127 459.9 280 90.7
Ciclev10012473m.g Citrus clementina HOM05D005959 ORTHO05D007263 3.5e-123 445.3 268 88.8
FAN02G2849 Fragaria x ananassa HOM05D005959 ORTHO05D007263 3.5e-123 445.3 268 86.2
FAN09G4388 Fragaria x ananassa HOM05D005959 ORTHO05D007263 3.5e-123 445.3 264 87.9
RcHm_v2.0_Chr3g0468051 Rosa chinensis HOM05D005959 ORTHO05D007263 4.6e-123 444.9 268 86.6
FAN05G1034 Fragaria x ananassa HOM05D005959 ORTHO05D007263 7.8e-123 444.1 264 87.5
Manes.08G000700 Manihot esculenta HOM05D005959 ORTHO05D007263 7.8e-123 444.1 262 90.8
FAN14G3394 Fragaria x ananassa HOM05D005959 ORTHO05D007263 1.0e-122 443.7 268 85.4
Cfa017467 Carpinus fangiana HOM05D005959 ORTHO05D007263 5.1e-122 441.4 264 90.2
MSTRG.26742 Avicennia marina HOM05D005959 ORTHO05D007263 5.6e-121 438.0 264 87.9
Thecc.05G049500 Theobroma cacao HOM05D005959 ORTHO05D007263 7.3e-121 437.6 264 87.9
Gohir.D04G117100 Gossypium hirsutum HOM05D005959 ORTHO05D007263 1.3e-120 436.8 266 86.8
Gorai.009G422000 Gossypium raimondii HOM05D005959 ORTHO05D007263 2.1e-120 436.0 266 86.8
QL07p045958 Quercus lobata HOM05D005959 ORTHO05D007263 6.2e-120 434.5 263 86.7
Duzib106G1538 Durio zibethinus HOM05D005959 ORTHO05D007263 1.1e-119 433.7 264 88.3
Prupe.6G245600 Prunus persica HOM05D005959 ORTHO05D007263 1.1e-119 433.7 268 85.4
TWI74G1319 Tripterygium wilfordii HOM05D005959 ORTHO05D007263 1.4e-119 433.3 264 89.4
Duzib128G1635 Durio zibethinus HOM05D005959 ORTHO05D007263 3.1e-119 432.2 266 86.8
FvH4_6g14820 Fragaria vesca HOM05D005959 ORTHO05D007263 3.1e-119 432.2 255 88.2
Haze_20691 Corylus avellana HOM05D005959 ORTHO05D007263 4.0e-119 431.8 282 84.4
Atru.chr8.2507 Acer truncatum HOM05D005959 ORTHO05D007263 5.3e-119 431.4 264 86.7
MD04G1110300 Malus domestica HOM05D005959 ORTHO05D007263 9.0e-119 430.6 268 84.7
Rhsim05G0184400 Rhododendron simsii HOM05D005959 ORTHO05D007263 9.0e-119 430.6 264 86.7
Duzib093G0581 Durio zibethinus HOM05D005959 ORTHO05D007263 1.5e-118 429.9 264 86.0
Glyma.10G047100 Glycine max HOM05D005959 ORTHO05D007263 2.0e-118 429.5 261 87.4
Peaxi162Scf00009g00079 Petunia axillaris HOM05D005959 ORTHO05D007263 5.8e-118 427.9 264 86.4
Cc06_g03270 Coffea canephora HOM05D005959 ORTHO05D007263 7.6e-118 427.6 264 85.2
Lj3A975G71 Lonicera japonica HOM05D005959 ORTHO05D007263 7.6e-118 427.6 264 86.0
Carub.0004s1924 Capsella rubella HOM05D005959 ORTHO05D007263 9.9e-118 427.2 280 80.4
Migut.L01643 Erythranthe guttata HOM05D005959 ORTHO05D007263 9.9e-118 427.2 263 85.9
Hma1.2p1_0111F.1_g053440 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 9.9e-118 427.2 261 85.1
Oeu026074.1 Olea europaea HOM05D005959 ORTHO05D007263 9.9e-118 427.2 264 86.0
MD12G1131100 Malus domestica HOM05D005959 ORTHO05D007263 3.8e-117 425.2 268 82.5
PGR004G1166 Punica granatum HOM05D005959 ORTHO05D007263 4.9e-117 424.9 262 87.4
TAR623G1105 Trochodendron aralioides HOM05D005959 ORTHO05D007263 8.4e-117 424.1 264 87.1
Thhalv10017068m.g Eutrema salsugineum HOM05D005959 ORTHO05D007263 1.9e-116 422.9 262 84.4
PGSC0003DMG400017610 Solanum tuberosum HOM05D005959 ORTHO05D007263 1.9e-116 422.9 263 85.9
BraA04t18329Z Brassica rapa HOM05D005959 ORTHO05D007263 7.1e-116 421.0 262 83.2
DCAR_020866 Daucus carota HOM05D005959 ORTHO05D007263 9.3e-116 420.6 261 85.4
Nitab4.5_0000725g0200 Nicotiana tabacum HOM05D005959 ORTHO05D007263 9.3e-116 420.6 263 84.8
ATR0594G178 Amborella trichopoda HOM05D005959 ORTHO05D007263 1.2e-115 420.2 257 87.5
AT2G37330 Arabidopsis thaliana HOM05D005959 ORTHO05D007263 1.2e-115 420.2 264 82.6
A04p28510 Brassica napus HOM05D005959 ORTHO05D007263 1.2e-115 420.2 262 83.2
Solyc10g085950.2 Solanum lycopersicum HOM05D005959 ORTHO05D007263 1.2e-115 420.2 263 84.8
C04p65830 Brassica napus HOM05D005959 ORTHO05D007263 1.6e-115 419.9 262 83.2
CARHR132260 Cardamine hirsuta HOM05D005959 ORTHO05D007263 1.6e-115 419.9 280 79.6
Aqoxy2G00899 Aquilegia oxysepala HOM05D005959 ORTHO05D007263 1.0e-114 417.2 257 86.0
AL4G33710 Arabidopsis lyrata HOM05D005959 ORTHO05D007263 1.0e-114 417.2 264 81.4
BcaC02g07517 Brassica carinata HOM05D005959 ORTHO05D007263 1.0e-114 417.2 262 82.8
BolC4t28086H Brassica oleracea HOM05D005959 ORTHO05D007263 1.0e-114 417.2 262 82.8
Hund12071 Selenicereus undatus HOM05D005959 ORTHO05D007263 1.3e-114 416.8 266 83.1
SGA_v2.0_scaffold94G28648 Striga asiatica HOM05D005959 ORTHO05D007263 1.3e-114 416.8 264 83.0
Eucgr.K03183 Eucalyptus grandis HOM05D005959 ORTHO05D007263 3.0e-114 415.6 261 85.1
CSS0020892 Camellia sinensis var. sinensis HOM05D005959 ORTHO05D007263 3.9e-114 415.2 264 82.2
Lsat_1_v5_gn_6_33160 Lactuca sativa HOM05D005959 ORTHO05D007263 5.1e-114 414.8 263 82.5
Lalb_Chr25g0289351 Lupinus albus HOM05D005959 ORTHO05D007263 5.1e-114 414.8 265 82.3
Sp4g19650 Schrenkiella parvula HOM05D005959 ORTHO05D007263 5.1e-114 414.8 262 82.1
unitig_578.g16043 Utricularia gibba HOM05D005959 ORTHO05D007263 2.5e-113 412.5 261 84.3
Ca_08807_v3 Cicer arietinum L. HOM05D005959 ORTHO05D007263 3.3e-113 412.1 262 83.2
Glyma.03G175800 Glycine max HOM05D005959 ORTHO05D007263 4.3e-113 411.8 272 80.9
Lj1g0020453 Lotus japonicus HOM05D005959 ORTHO05D007263 4.3e-113 411.8 258 84.1
EL10Ac7g17275 Beta vulgaris HOM05D005959 ORTHO05D007263 7.4e-113 411.0 262 84.0
Medtr7g100160 Medicago truncatula HOM05D005959 ORTHO05D007263 7.4e-113 411.0 262 82.4
BcaC02g11852 Brassica carinata HOM05D005959 ORTHO05D007263 9.6e-113 410.6 262 81.7
BraA05t19827Z Brassica rapa HOM05D005959 ORTHO05D007263 1.3e-112 410.2 262 81.7
A05p08590 Brassica napus HOM05D005959 ORTHO05D007263 1.6e-112 409.8 262 81.3
CDE07G0433 Ceratophyllum demersum HOM05D005959 ORTHO05D007263 1.6e-112 409.8 266 80.8
Psat0s1952g0120 Pisum sativum HOM05D005959 ORTHO05D007263 1.6e-112 409.8 264 81.4
HanXRQChr13g0399331 Helianthus annuus HOM05D005959 ORTHO05D007263 2.1e-112 409.5 264 83.0
MBI14_g34528_MAGBIO Magnolia biondii HOM05D005959 ORTHO05D007263 2.1e-112 409.5 252 88.1
C04p10680 Brassica napus HOM05D005959 ORTHO05D007263 2.8e-112 409.1 260 81.9
BolC4t22661H Brassica oleracea HOM05D005959 ORTHO05D007263 2.8e-112 409.1 260 81.9
Phvul.001G172900 Phaseolus vulgaris HOM05D005959 ORTHO05D007263 3.7e-112 408.7 262 81.7
arahy.Tifrunner.gnm1.ann1.R87Y2D Arachis hypogaea HOM05D005959 ORTHO05D007263 8.1e-112 407.5 261 82.8
Sopen10g035320 Solanum pennellii HOM05D005959 ORTHO05D007263 8.1e-112 407.5 253 86.2
TPR.G21452 Trifolium pratense HOM05D005959 ORTHO05D007263 8.1e-112 407.5 262 81.7
Lj2A103T72 Lonicera japonica HOM05D005959 ORTHO05D007263 2.4e-111 406.0 259 83.0
arahy.Tifrunner.gnm1.ann1.T45XFJ Arachis hypogaea HOM05D005959 ORTHO05D007263 5.3e-111 404.8 258 83.3
CsaV3_3G035240 Cucumis sativus L. HOM05D005959 ORTHO05D007263 6.9e-111 404.4 261 82.0
PSO339G1263 Papaver somniferum HOM05D005959 ORTHO05D007263 6.9e-111 404.4 257 84.0
Sed0012545 Sechium edule HOM05D005959 ORTHO05D007263 6.9e-111 404.4 260 81.9
Sc01g0003780 Simmondsia chinensis HOM05D005959 ORTHO05D007263 6.9e-111 404.4 259 83.0
CANSAT80G1914 Cannabis sativa HOM05D005959 ORTHO05D007263 9.0e-111 404.1 253 83.4
MELO3C009294.2 Cucumis melo HOM05D005959 ORTHO05D007263 5.8e-110 401.4 261 81.2
Ah.15g091970 Amaranthus hybridus HOM05D005959 ORTHO05D007263 1.3e-109 400.2 262 81.3
PSO384G3658 Papaver somniferum HOM05D005959 ORTHO05D007263 1.7e-109 399.8 257 82.9
ECA233G2168 Erigeron canadensis HOM05D005959 ORTHO05D007263 2.2e-109 399.4 253 84.2
Aa31LG5G22650 Aethionema arabicum HOM05D005959 ORTHO05D007263 3.8e-109 398.7 262 80.5
CAN.G687.19 Capsicum annuum HOM05D005959 ORTHO05D007263 6.4e-109 397.9 241 88.4
BcaB02g09288 Brassica carinata HOM05D005959 ORTHO05D007263 8.4e-109 397.5 262 80.2
Lalb_Chr20g0113031 Lupinus albus HOM05D005959 ORTHO05D007263 2.5e-108 396.0 258 80.2
vmacro20093 Vaccinium macrocarpon HOM05D005959 ORTHO05D007263 1.2e-107 393.7 286 79.0
HPP92_021201 Vanilla planifolia HOM05D005959 ORTHO05D007263 1.2e-107 393.7 266 77.8
CiPaw.09G185300 Carya illinoinensis HOM05D005959 ORTHO05D007263 3.5e-107 392.1 225 92.9
Aa31LG5G22670 Aethionema arabicum HOM05D005959 ORTHO05D007263 4.6e-107 391.7 253 81.8
THA.LOC104823437 Tarenaya hassleriana HOM05D005959 ORTHO05D007263 4.6e-107 391.7 280 75.7
Gohir.A04G077900 Gossypium hirsutum HOM05D005959 ORTHO05D007263 7.9e-107 391.0 287 76.3
BcaB06g28984 Brassica carinata HOM05D005959 ORTHO05D007263 1.0e-106 390.6 251 82.1
GSVIVG01025576001 Vitis vinifera HOM05D005959 ORTHO05D007263 9.6e-105 384.0 225 91.1
Os05g0119000 Oryza sativa ssp. japonica HOM05D005959 ORTHO05D007263 6.2e-104 381.3 257 79.4
Aa31LG5G22660 Aethionema arabicum HOM05D005959 ORTHO05D007263 8.2e-104 380.9 264 75.0
SEGI_41460 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 8.2e-104 380.9 257 79.0
Cpa.g.sc114.24 Carica papaya HOM05D005959 ORTHO05D007263 1.7e-101 373.2 237 83.5
Hma1.2p1_0111F.1_g053390 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 3.8e-101 372.1 262 73.3
Eucgr.A01210 Eucalyptus grandis HOM05D005959 ORTHO05D007263 2.7e-99 365.9 260 77.3
Mapoly0099s0026 Marchantia polymorpha HOM05D005959 ORTHO05D007263 1.6e-96 356.7 262 71.8
Hma1.2p1_0111F.1_g053380 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 8.2e-96 354.4 262 69.8
Pp3c20_6820 Physcomitrium patens HOM05D005959 ORTHO05D007263 5.3e-95 351.7 254 72.0
AUR62041007 Chenopodium quinoa HOM05D005959 ORTHO05D007263 2.0e-94 349.7 261 74.3
COL.COLO4_10311 Corchorus olitorius HOM05D005959 ORTHO05D007263 9.4e-92 340.9 264 73.5
AagrBONN_evm.TU.Sc2ySwM_344.2577 Anthoceros agrestis HOM05D005959 ORTHO05D007263 2.7e-91 339.3 280 64.3
Dinv35677 Davidia involucrata HOM05D005959 ORTHO05D007263 1.1e-87 327.4 187 93.6
SMO271G0174 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 6.9e-87 324.7 253 68.4
SEGI_29713 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 4.5e-86 322.0 252 69.8
Actinidia05285 Actinidia chinensis HOM05D005959 ORTHO05D007263 4.2e-68 262.3 179 77.1
CBR_g49882 Chara braunii HOM05D000019 ORTHO05D000048 4.7e-67 258.8 255 53.7
ClCG10G020740 Citrullus lanatus HOM05D005959 ORTHO05D007263 6.3e-64 248.4 151 86.8
Nitab4.5_0002073g0040 Nicotiana tabacum HOM05D005959 ORTHO05D007263 6.3e-64 248.4 263 58.2
Nn2g12822 Nelumbo nucifera HOM05D005959 ORTHO05D007263 7.7e-62 241.5 160 81.2
Actinidia11237 Actinidia chinensis HOM05D005959 ORTHO05D007263 1.7e-61 240.4 154 84.4
Actinidia19734 Actinidia chinensis HOM05D005959 ORTHO05D007263 8.0e-51 204.9 264 51.1
SMO364G0860 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 5.2e-50 202.2 243 44.0
CBR_g3295 Chara braunii HOM05D005959 ORTHO05D007263 2.0e-46 190.3 250 42.4
AagrBONN_evm.TU.Sc2ySwM_344.2052 Anthoceros agrestis HOM05D005959 ORTHO05D007263 1.1e-39 167.9 234 40.2
CDE04G1398 Ceratophyllum demersum HOM05D004061 ORTHO05D004693 2.8e-35 153.3 98 78.6
Actinidia13264 Actinidia chinensis HOM05D005959 ORTHO05D007263 5.2e-34 149.1 96 84.4
AagrBONN_evm.TU.Sc2ySwM_344.389 Anthoceros agrestis HOM05D005959 ORTHO05D007263 1.3e-32 144.4 240 36.2
Nn5g28122 Nelumbo nucifera HOM05D005959 ORTHO05D007263 3.7e-32 142.9 77 96.1
Nn1g07598 Nelumbo nucifera HOM05D005959 ORTHO05D007263 1.3e-29 134.4 75 92.0
MD08G1090300 Malus domestica HOM05D005959 ORTHO05D007263 1.9e-28 130.6 117 61.5
Cre16.g673000 Chlamydomonas reinhardtii HOM05D005959 ORTHO05D007263 9.9e-25 118.2 233 35.6
TAR629G2669 Trochodendron aralioides HOM05D002023 ORTHO05D002049 1.9e-23 114.0 100 64.0
Oeu004323.1 Olea europaea HOM05D005959 ORTHO05D007263 9.6e-12 75.1 75 61.3


User provided reference genes

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