Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.016G076601 Populus trichocarpa HOM05D000972 ORTHO05D007713 9.0e-49 196.4 88 100.0
Potri.016G077066 Populus trichocarpa HOM05D000972 ORTHO05D007713 9.0e-49 196.4 88 100.0
Potri.016G076550 Populus trichocarpa HOM05D000972 ORTHO05D007713 1.8e-41 172.2 85 92.9
Sabra16G0079300 Salix brachista HOM05D000972 ORTHO05D007713 5.8e-40 167.2 85 89.4
Sabra16G0081900 Salix brachista HOM05D000972 ORTHO05D007713 7.6e-40 166.8 85 88.2
COL.COLO4_29684 Corchorus olitorius HOM05D002712 ORTHO05D007713 8.1e-34 146.7 87 72.4
Nn5g27883 Nelumbo nucifera HOM05D000972 ORTHO05D007713 9.0e-33 143.3 85 72.9
Manes.09G053300 Manihot esculenta HOM05D000972 ORTHO05D007713 1.2e-32 142.9 85 76.5
MBI15_g18499_MAGBIO Magnolia biondii HOM05D000972 ORTHO05D007713 1.5e-32 142.5 85 74.1
PGR142G0101 Punica granatum HOM05D000972 ORTHO05D007713 2.0e-32 142.1 85 70.6
TAR369G0498 Trochodendron aralioides HOM05D000972 ORTHO05D007713 9.9e-32 139.8 85 69.4
HPP92_025140 Vanilla planifolia HOM05D000972 ORTHO05D007713 9.9e-32 139.8 82 72.0
Cfa016634 Carpinus fangiana HOM05D000972 ORTHO05D007713 1.7e-31 139.0 85 71.8
Ciclev10012191m.g Citrus clementina HOM05D000972 ORTHO05D007713 1.7e-31 139.0 85 71.8
Manes.08G027500 Manihot esculenta HOM05D000972 ORTHO05D007713 3.8e-31 137.9 85 71.8
CiPaw.09G016400 Carya illinoinensis HOM05D000972 ORTHO05D007713 6.4e-31 137.1 85 68.2
Os01g0862000 Oryza sativa ssp. japonica HOM05D000972 ORTHO05D007713 6.4e-31 137.1 87 70.1
QL07p038365 Quercus lobata HOM05D000972 ORTHO05D007713 6.4e-31 137.1 84 73.8
Rhsim12G0054400 Rhododendron simsii HOM05D000972 ORTHO05D007713 6.4e-31 137.1 85 71.8
Haze_19642 Corylus avellana HOM05D007235 ORTHO05D008985 8.4e-31 136.7 81 72.8
PSO801G0646 Papaver somniferum HOM05D000972 ORTHO05D007713 8.4e-31 136.7 85 69.4
HPP92_026082 Vanilla planifolia HOM05D000972 ORTHO05D007713 8.4e-31 136.7 82 70.7
PSO339G0894 Papaver somniferum HOM05D000972 ORTHO05D007713 1.4e-30 136.0 85 69.4
Carub.0005s1899 Capsella rubella HOM05D000972 ORTHO05D007713 2.5e-30 135.2 85 67.1
Lj2A141T62 Lonicera japonica HOM05D000972 ORTHO05D007713 2.5e-30 135.2 77 75.3
CSS0004636 Camellia sinensis var. sinensis HOM05D000972 ORTHO05D007713 3.2e-30 134.8 85 69.4
CSS0013615 Camellia sinensis var. sinensis HOM05D000972 ORTHO05D007713 3.2e-30 134.8 85 69.4
Aqoxy2G01081 Aquilegia oxysepala HOM05D000972 ORTHO05D007713 4.2e-30 134.4 85 70.6
Thecc.05G093800 Theobroma cacao HOM05D000972 ORTHO05D007713 5.5e-30 134.0 85 68.2
Hma1.2p1_0820F.1_g223990 Hydrangea macrophylla HOM05D000972 ORTHO05D007713 7.1e-30 133.7 85 68.2
TAR623G0688 Trochodendron aralioides HOM05D007235 ORTHO05D008985 7.1e-30 133.7 85 68.2
GSVIVG01033878001 Vitis vinifera HOM05D000972 ORTHO05D007713 7.1e-30 133.7 77 72.7
ATR0832G001 Amborella trichopoda HOM05D000972 ORTHO05D007713 1.2e-29 132.9 85 67.1
Duzib093G1999 Durio zibethinus HOM05D000972 ORTHO05D007713 1.2e-29 132.9 85 67.1
MD12G1028900 Malus domestica HOM05D000972 ORTHO05D007713 1.2e-29 132.9 85 67.1
Aa31LG10G7590 Aethionema arabicum HOM05D000972 ORTHO05D007713 1.6e-29 132.5 85 65.9
A09p45670 Brassica napus HOM05D000972 ORTHO05D007713 1.6e-29 132.5 85 65.9
Nitab4.5_0001933g0110 Nicotiana tabacum HOM05D000972 ORTHO05D007713 1.6e-29 132.5 77 75.3
Oeu025666.1 Olea europaea HOM05D000972 ORTHO05D007713 1.6e-29 132.5 85 69.4
Nitab4.5_0008328g0010 Nicotiana tabacum HOM05D000972 ORTHO05D007713 2.1e-29 132.1 85 69.4
TWI74G1320 Tripterygium wilfordii HOM05D000972 ORTHO05D007713 2.1e-29 132.1 85 68.2
Migut.J01010 Erythranthe guttata HOM05D000972 ORTHO05D007713 2.7e-29 131.7 85 65.9
vmacro07445 Vaccinium macrocarpon HOM05D000972 ORTHO05D007713 2.7e-29 131.7 87 64.4
Dinv31711 Davidia involucrata HOM05D000972 ORTHO05D007713 3.5e-29 131.3 85 68.2
Thhalv10010527m.g Eutrema salsugineum HOM05D000972 ORTHO05D007713 3.5e-29 131.3 85 64.7
Prupe.7G102600 Prunus persica HOM05D000972 ORTHO05D007713 3.5e-29 131.3 85 67.1
THA.LOC104799755 Tarenaya hassleriana HOM05D000972 ORTHO05D007713 3.5e-29 131.3 85 65.9
Sp5g09730 Schrenkiella parvula HOM05D000972 ORTHO05D007713 4.6e-29 131.0 85 64.7
AT3G52570 Arabidopsis thaliana HOM05D000972 ORTHO05D007713 6.0e-29 130.6 85 64.7
MSTRG.5864 Avicennia marina HOM05D000972 ORTHO05D007713 6.0e-29 130.6 85 68.2
BraA09t40028Z Brassica rapa HOM05D000972 ORTHO05D007713 6.0e-29 130.6 77 70.1
Sopen10g032750 Solanum pennellii HOM05D000972 ORTHO05D007713 6.0e-29 130.6 85 69.4
CARHR162360 Cardamine hirsuta HOM05D000972 ORTHO05D007713 7.9e-29 130.2 85 63.5
Peaxi162Scf00096g00824 Petunia axillaris HOM05D000972 ORTHO05D007713 7.9e-29 130.2 85 70.6
PGSC0003DMG400028161 Solanum tuberosum HOM05D000972 ORTHO05D007713 7.9e-29 130.2 85 68.2
BcaB01g00356 Brassica carinata HOM05D000972 ORTHO05D007713 1.0e-28 129.8 85 64.7
CAN.G1069.8 Capsicum annuum HOM05D000972 ORTHO05D007713 1.0e-28 129.8 85 69.4
Atru.chr8.1460 Acer truncatum HOM05D000972 ORTHO05D007713 1.3e-28 129.4 85 65.9
AL5G33350 Arabidopsis lyrata HOM05D000972 ORTHO05D007713 1.3e-28 129.4 85 63.5
EL10Ac7g16887 Beta vulgaris HOM05D000972 ORTHO05D007713 1.3e-28 129.4 85 64.7
BcaC07g39626 Brassica carinata HOM05D000972 ORTHO05D007713 1.3e-28 129.4 85 63.5
C08p27870 Brassica napus HOM05D000972 ORTHO05D007713 1.3e-28 129.4 85 63.5
BolC8t50402H Brassica oleracea HOM05D000972 ORTHO05D007713 1.3e-28 129.4 85 63.5
CANSAT64G1571 Cannabis sativa HOM05D000972 ORTHO05D007713 1.3e-28 129.4 84 63.1
Solyc10g083270.3 Solanum lycopersicum HOM05D000972 ORTHO05D007713 1.3e-28 129.4 85 69.4
CsaV3_3G037480 Cucumis sativus L. HOM05D000972 ORTHO05D007713 1.8e-28 129.0 85 64.7
Sed0000922 Sechium edule HOM05D000972 ORTHO05D007713 1.8e-28 129.0 85 64.7
MELO3C000513.2 Cucumis melo HOM05D000972 ORTHO05D007713 2.3e-28 128.6 78 67.9
Ah.15g090770 Amaranthus hybridus HOM05D000972 ORTHO05D007713 3.0e-28 128.3 85 64.7
Glyma.03G197700 Glycine max HOM05D000972 ORTHO05D007713 3.9e-28 127.9 84 69.0
RcHm_v2.0_Chr3g0474561 Rosa chinensis HOM05D000972 ORTHO05D007713 3.9e-28 127.9 85 64.7
Zm00001eb147060 Zea mays HOM05D000972 ORTHO05D007713 5.1e-28 127.5 85 65.9
ClCG10G018760 Citrullus lanatus HOM05D000972 ORTHO05D007713 6.7e-28 127.1 85 62.4
Cc00_g15510 Coffea canephora HOM05D000972 ORTHO05D007713 6.7e-28 127.1 85 64.7
Gohir.D04G097600 Gossypium hirsutum HOM05D000972 ORTHO05D007713 6.7e-28 127.1 85 65.9
Sc02g0000400 Simmondsia chinensis HOM05D000972 ORTHO05D007713 6.7e-28 127.1 85 65.9
SGA_v2.0_scaffold31G12896 Striga asiatica HOM05D000972 ORTHO05D007713 6.7e-28 127.1 77 68.8
Lsat_1_v5_gn_8_74921 Lactuca sativa HOM05D000972 ORTHO05D007713 8.7e-28 126.7 85 64.7
Eucgr.K02561 Eucalyptus grandis HOM05D000972 ORTHO05D007713 1.1e-27 126.3 76 68.4
Glyma.19G195600 Glycine max HOM05D000972 ORTHO05D007713 1.1e-27 126.3 84 66.7
HanXRQChr05g0133031 Helianthus annuus HOM05D000972 ORTHO05D007713 1.5e-27 125.9 85 64.7
FAN02G4086 Fragaria x ananassa HOM05D000972 ORTHO05D007713 1.9e-27 125.6 78 66.7
Gorai.009G400200 Gossypium raimondii HOM05D000972 ORTHO05D007713 1.9e-27 125.6 85 64.7
unitig_699.g19304 Utricularia gibba HOM05D000972 ORTHO05D007713 1.9e-27 125.6 85 62.4
ECA236G1463 Erigeron canadensis HOM05D000972 ORTHO05D007713 2.5e-27 125.2 85 64.7
SHI40524 Sapria himalayana HOM05D000972 ORTHO05D007713 3.3e-27 124.8 85 64.7
VMungo1383G1894 Vigna mungo HOM05D000972 ORTHO05D007713 3.3e-27 124.8 76 72.4
FvH4_6g19320 Fragaria vesca HOM05D000972 ORTHO05D007713 5.6e-27 124.0 85 62.4
FAN05G4422 Fragaria x ananassa HOM05D000972 ORTHO05D007713 5.6e-27 124.0 78 66.7
CSS0019016 Camellia sinensis var. sinensis HOM05D000972 ORTHO05D007713 7.4e-27 123.6 85 63.5
DCAR_007759 Daucus carota HOM05D000972 ORTHO05D007713 7.4e-27 123.6 85 64.7
HanXRQChr05g0133041 Helianthus annuus HOM05D000972 ORTHO05D007713 7.4e-27 123.6 77 68.8
FAN14G5518 Fragaria x ananassa HOM05D000972 ORTHO05D007713 9.6e-27 123.2 78 65.4
Phvul.001G191800 Phaseolus vulgaris HOM05D000972 ORTHO05D007713 1.3e-26 122.9 84 65.5
Hund03934 Selenicereus undatus HOM05D000972 ORTHO05D007713 1.6e-26 122.5 84 61.9
Actinidia05408 Actinidia chinensis HOM05D000972 ORTHO05D007713 2.1e-26 122.1 86 61.6
AUR62037006 Chenopodium quinoa HOM05D000972 ORTHO05D007713 2.1e-26 122.1 77 64.9
AUR62006213 Chenopodium quinoa HOM05D000972 ORTHO05D007713 2.8e-26 121.7 77 66.2
Lj1g0015565 Lotus japonicus HOM05D000972 ORTHO05D007713 4.8e-26 120.9 85 63.5
arahy.Tifrunner.gnm1.ann1.G8BSRK Arachis hypogaea HOM05D001772 ORTHO05D005958 6.2e-26 120.6 84 65.5
Medtr7g105100 Medicago truncatula HOM05D000972 ORTHO05D007713 6.2e-26 120.6 84 65.5
Ca_09021_v3 Cicer arietinum L. HOM05D000972 ORTHO05D007713 1.1e-25 119.8 82 64.6
Lalb_Chr20g0111611 Lupinus albus HOM05D000972 ORTHO05D007713 1.4e-25 119.4 84 63.1
Psat3g031600 Pisum sativum HOM05D000972 ORTHO05D007713 1.4e-25 119.4 84 64.3
Cpa.g.sc104.103 Carica papaya HOM05D000972 ORTHO05D007713 1.8e-25 119.0 85 62.4
Lsat_1_v5_gn_8_74941 Lactuca sativa HOM05D000972 ORTHO05D007713 6.9e-25 117.1 77 67.5
arahy.Tifrunner.gnm1.ann1.ZF8MBG Arachis hypogaea HOM05D000972 ORTHO05D007713 1.2e-24 116.3 76 68.4
Eucgr.K02563 Eucalyptus grandis HOM05D000972 ORTHO05D007713 2.6e-24 115.2 68 70.6
CDE06G2732 Ceratophyllum demersum HOM05D000972 ORTHO05D007713 7.6e-24 113.6 85 58.8
SEGI_13028 Sequoiadendron giganteum HOM05D000972 ORTHO05D007713 1.7e-23 112.5 85 58.8
SEGI_24848 Sequoiadendron giganteum HOM05D000972 ORTHO05D007713 3.8e-23 111.3 77 62.3
Sed0023657 Sechium edule HOM05D000972 ORTHO05D007713 3.5e-21 104.8 77 58.4
AagrBONN_evm.TU.Sc2ySwM_368.1034 Anthoceros agrestis HOM05D000972 ORTHO05D007713 1.0e-20 103.2 85 50.6
Pp3c4_11150 Physcomitrium patens HOM05D000972 ORTHO05D007713 6.3e-18 94.0 85 51.8
Mapoly0062s0062 Marchantia polymorpha HOM05D000972 ORTHO05D007713 2.4e-17 92.0 85 52.9
SMO116G0199 Selaginella moellendorffii HOM05D000972 ORTHO05D007713 5.0e-15 84.3 85 48.2
CBR_g30729 Chara braunii HOM05D000972 ORTHO05D007713 8.8e-12 73.6 88 37.5
Cre06.g259700 Chlamydomonas reinhardtii HOM05D000972 ORTHO05D007713 6.3e-10 67.4 61 59.0
Glyma.11G014500 Glycine max HOM05D000972 ORTHO05D007902 2.5e-06 55.5 64 45.3
Glyma.01G231600 Glycine max HOM05D000972 ORTHO05D007902 4.2e-06 54.7 64 43.8
Lalb_Chr05g0211421 Lupinus albus HOM05D000972 ORTHO05D007902 7.2e-06 53.9 64 45.3
RcHm_v2.0_Chr7g0231591 Rosa chinensis HOM05D000972 ORTHO05D007902 7.2e-06 53.9 64 42.2
Hund02269 Selenicereus undatus HOM05D000972 ORTHO05D007902 9.4e-06 53.5 64 43.8


User provided reference genes

Program Settings