Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.016G072700 Populus trichocarpa HOM05D006689 ORTHO05D008349 4.7e-177 624.4 310 100.0
Sabra16G0075500 Salix brachista HOM05D006689 ORTHO05D008349 4.0e-128 461.8 354 72.6
FvH4_6g19910 Fragaria vesca HOM05D006689 ORTHO05D008349 2.8e-121 439.1 309 68.0
Psat3g030240 Pisum sativum HOM05D006689 ORTHO05D008349 6.9e-120 434.5 310 67.1
MD14G1035800 Malus domestica HOM05D006689 ORTHO05D008349 1.4e-117 426.8 300 70.3
TAR633G1471 Trochodendron aralioides HOM05D006689 ORTHO05D008349 4.2e-117 425.2 299 68.6
AL3G23170 Arabidopsis lyrata HOM05D006689 ORTHO05D008349 5.5e-117 424.9 309 66.7
Duzib106G1273 Durio zibethinus HOM05D006689 ORTHO05D008349 4.6e-116 421.8 304 67.4
GSVIVG01033928001 Vitis vinifera HOM05D006689 ORTHO05D008349 6.0e-116 421.4 304 67.4
PGR004G2039 Punica granatum HOM05D006689 ORTHO05D008349 1.0e-115 420.6 296 69.3
BcaB04g18654 Brassica carinata HOM05D006689 ORTHO05D008349 5.1e-115 418.3 307 66.4
Carub.0003s1094 Capsella rubella HOM05D006689 ORTHO05D008349 4.3e-114 415.2 309 64.7
A03p37220 Brassica napus HOM05D006689 ORTHO05D008349 5.6e-114 414.8 302 66.9
Atru.chr8.1397 Acer truncatum HOM05D006689 ORTHO05D008349 9.6e-114 414.1 302 67.5
CARHR086170 Cardamine hirsuta HOM05D006689 ORTHO05D008349 9.6e-114 414.1 309 65.7
Eucgr.A02606 Eucalyptus grandis HOM05D006689 ORTHO05D008349 9.6e-114 414.1 296 66.6
Thhalv10021180m.g Eutrema salsugineum HOM05D006689 ORTHO05D008349 9.6e-114 414.1 309 65.0
Sp3g09850 Schrenkiella parvula HOM05D006689 ORTHO05D008349 1.6e-113 413.3 303 66.3
TPR.G23318 Trifolium pratense HOM05D006689 ORTHO05D008349 1.6e-113 413.3 303 66.0
Aa31LG3G5030 Aethionema arabicum HOM05D006689 ORTHO05D008349 2.1e-113 412.9 305 65.2
TWI74G1155 Tripterygium wilfordii HOM05D006689 ORTHO05D008349 2.8e-113 412.5 298 66.1
BraA03t12881Z Brassica rapa HOM05D006689 ORTHO05D008349 4.8e-113 411.8 302 66.9
Prupe.7G098300 Prunus persica HOM05D006689 ORTHO05D008349 4.8e-113 411.8 300 68.3
Lj1g0003895 Lotus japonicus HOM05D006689 ORTHO05D008349 6.2e-113 411.4 307 65.8
CSS0035173 Camellia sinensis var. sinensis HOM05D006689 ORTHO05D008349 8.2e-113 411.0 305 64.9
C05p56320 Brassica napus HOM05D006689 ORTHO05D008349 1.4e-112 410.2 303 66.0
AT3G11620 Arabidopsis thaliana HOM05D006689 ORTHO05D008349 1.8e-112 409.8 283 69.3
CANSAT64G2446 Cannabis sativa HOM05D006689 ORTHO05D008349 2.4e-112 409.5 305 64.6
C03p45070 Brassica napus HOM05D006689 ORTHO05D008349 3.1e-112 409.1 309 64.7
FAN02G4476 Fragaria x ananassa HOM05D006689 ORTHO05D008349 5.3e-112 408.3 309 64.7
Lalb_Chr20g0111471 Lupinus albus HOM05D006689 ORTHO05D008349 5.3e-112 408.3 301 65.1
FAN14G3242 Fragaria x ananassa HOM05D006689 ORTHO05D008349 6.9e-112 407.9 309 64.7
Lalb_Chr01g0017911 Lupinus albus HOM05D006689 ORTHO05D008349 1.5e-111 406.8 300 66.7
BcaC01g04099 Brassica carinata HOM05D006689 ORTHO05D008349 2.0e-111 406.4 303 65.3
A05p37720 Brassica napus HOM05D006689 ORTHO05D008349 2.6e-111 406.0 303 65.3
BraA05t22567Z Brassica rapa HOM05D006689 ORTHO05D008349 4.5e-111 405.2 303 64.7
CiPaw.09G018700 Carya illinoinensis HOM05D006689 ORTHO05D008349 5.8e-111 404.8 308 64.9
Hma1.2p1_0064F.1_g034840 Hydrangea macrophylla HOM05D006689 ORTHO05D008349 5.8e-111 404.8 298 66.1
QL07p037513 Quercus lobata HOM05D006689 ORTHO05D008349 5.8e-111 404.8 300 66.0
Gorai.009G398000 Gossypium raimondii HOM05D006689 ORTHO05D008349 7.6e-111 404.4 301 66.1
FAN05G1672 Fragaria x ananassa HOM05D006689 ORTHO05D008349 5.5e-109 398.3 309 63.4
QL07p037495 Quercus lobata HOM05D006689 ORTHO05D008349 5.5e-109 398.3 300 65.7
Sc07g0005680 Simmondsia chinensis HOM05D006689 ORTHO05D008349 5.5e-109 398.3 298 64.1
BolC5t34296H Brassica oleracea HOM05D006689 ORTHO05D008349 9.3e-109 397.5 283 67.8
Cpa.g.sc104.62 Carica papaya HOM05D006689 ORTHO05D008349 9.3e-109 397.5 301 64.8
BcaB06g25602 Brassica carinata HOM05D006689 ORTHO05D008349 1.2e-108 397.1 307 64.2
Aqoxy4G02685 Aquilegia oxysepala HOM05D006689 ORTHO05D008349 6.0e-108 394.8 298 63.4
Actinidia32058 Actinidia chinensis HOM05D006689 ORTHO05D008349 1.8e-107 393.3 303 64.4
Nn6g34760 Nelumbo nucifera HOM05D006689 ORTHO05D008349 3.3e-106 389.0 302 62.3
MD12G1034600 Malus domestica HOM05D006689 ORTHO05D008349 4.3e-106 388.7 286 68.5
Cc06_g06350 Coffea canephora HOM05D006689 ORTHO05D008349 1.3e-105 387.1 305 61.0
Cfa016668 Carpinus fangiana HOM05D006689 ORTHO05D008349 4.8e-105 385.2 305 63.6
Solyc01g007790.4 Solanum lycopersicum HOM05D006689 ORTHO05D008349 1.1e-104 384.0 309 61.8
Sopen01g003330 Solanum pennellii HOM05D006689 ORTHO05D008349 1.8e-104 383.3 309 61.8
PSO384G4437 Papaver somniferum HOM05D006689 ORTHO05D008349 2.4e-104 382.9 302 59.9
PSO339G4581 Papaver somniferum HOM05D006689 ORTHO05D008349 3.1e-104 382.5 302 59.9
CsaV3_6G040970 Cucumis sativus L. HOM05D006689 ORTHO05D008349 6.9e-104 381.3 300 59.3
DCAR_013430 Daucus carota HOM05D006689 ORTHO05D008349 1.5e-103 380.2 308 63.3
BcaC05g29349 Brassica carinata HOM05D006689 ORTHO05D008349 1.7e-102 376.7 281 65.5
Oeu017715.1 Olea europaea HOM05D006689 ORTHO05D008349 1.1e-101 374.0 310 60.0
HPP92_023075 Vanilla planifolia HOM05D006689 ORTHO05D008349 6.1e-100 368.2 300 61.7
Zm00001eb362600 Zea mays HOM05D006689 ORTHO05D008349 6.1e-100 368.2 298 59.1
Ciclev10011965m.g Citrus clementina HOM05D006689 ORTHO05D008349 1.0e-99 367.5 319 57.4
FAN09G0196 Fragaria x ananassa HOM05D006689 ORTHO05D008349 3.9e-99 365.5 401 49.6
HanXRQChr13g0398201 Helianthus annuus HOM05D006689 ORTHO05D008349 2.5e-98 362.8 301 57.8
SEGI_26711 Sequoiadendron giganteum HOM05D006689 ORTHO05D008349 5.7e-98 361.7 297 57.6
ECA233G1524 Erigeron canadensis HOM05D006689 ORTHO05D008349 3.8e-94 349.0 282 59.2
arahy.Tifrunner.gnm1.ann1.YAPI8V Arachis hypogaea HOM05D006689 ORTHO05D008349 5.0e-94 348.6 303 57.8
Phvul.001G194040 Phaseolus vulgaris HOM05D006689 ORTHO05D008349 7.9e-92 341.3 266 62.8
Sed0011891 Sechium edule HOM05D006689 ORTHO05D008349 3.9e-91 339.0 263 60.8
MBI17_g00993_MAGBIO Magnolia biondii HOM05D006689 ORTHO05D008349 8.8e-91 337.8 292 58.2
ClCG04G010350 Citrullus lanatus HOM05D006689 ORTHO05D008349 1.3e-89 334.0 306 53.9
Medtr7g105800 Medicago truncatula HOM05D006689 ORTHO05D008349 1.7e-89 333.6 242 66.1
Nitab4.5_0000665g0040 Nicotiana tabacum HOM05D006689 ORTHO05D008349 3.7e-89 332.4 309 55.3
FAN05G0890 Fragaria x ananassa HOM05D006689 ORTHO05D008349 1.8e-88 330.1 267 61.8
Peaxi162Scf00419g00069 Petunia axillaris HOM05D006689 ORTHO05D008349 3.1e-88 329.3 300 57.7
Rhsim03G0067100 Rhododendron simsii HOM05D006689 ORTHO05D008349 5.3e-88 328.6 442 42.1
Haze_19679 Corylus avellana HOM05D006689 ORTHO05D008349 1.2e-87 327.4 345 53.6
Manes.09G048600 Manihot esculenta HOM05D006689 ORTHO05D008349 2.6e-87 326.2 222 74.3
RcHm_v2.0_Chr3g0475311 Rosa chinensis HOM05D006689 ORTHO05D008349 4.5e-87 325.5 239 66.9
Gohir.D04G095300 Gossypium hirsutum HOM05D006689 ORTHO05D008349 5.0e-86 322.0 249 65.5
ATR0772G132 Amborella trichopoda HOM05D006689 ORTHO05D008349 6.5e-86 321.6 256 60.5
Lsat_1_v5_gn_6_35180 Lactuca sativa HOM05D006689 ORTHO05D008349 4.2e-85 318.9 282 55.3
arahy.Tifrunner.gnm1.ann1.ZIE5B9 Arachis hypogaea HOM05D006689 ORTHO05D008349 6.1e-84 315.1 303 54.5
Pp3c13_7330 Physcomitrium patens HOM05D006689 ORTHO05D008349 1.4e-83 313.9 294 50.3
Migut.L01819 Erythranthe guttata HOM05D006689 ORTHO05D008349 1.4e-75 287.3 232 58.6
SMO272G0021 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 2.2e-73 280.0 282 47.9
Nitab4.5_0000020g0370 Nicotiana tabacum HOM05D006689 ORTHO05D008349 1.6e-71 273.9 235 57.0
SMO165G0131 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 3.8e-70 269.2 308 44.2
Thecc.05G100700 Theobroma cacao HOM05D006689 ORTHO05D008349 9.4e-69 264.6 204 64.2
SalBow5G2063 Salvia bowleyana HOM05D006689 ORTHO05D008349 5.2e-67 258.8 300 48.0
Hma1.2p1_0064F.1_g034850 Hydrangea macrophylla HOM05D006689 ORTHO05D008349 2.6e-66 256.5 202 64.4
CAN.G574.36 Capsicum annuum HOM05D006689 ORTHO05D008349 1.8e-64 250.4 210 58.6
AUR62037035 Chenopodium quinoa HOM05D006689 ORTHO05D008349 4.3e-53 212.6 195 56.9
AUR62006266 Chenopodium quinoa HOM05D006689 ORTHO05D008349 2.1e-52 210.3 194 55.2
Glyma.03G200300 Glycine max HOM05D006689 ORTHO05D008349 2.1e-52 210.3 181 57.5
Hund19873 Selenicereus undatus HOM05D006689 ORTHO05D008349 3.6e-52 209.5 280 42.9
MELO3C024575.2 Cucumis melo HOM05D006689 ORTHO05D008349 8.9e-51 204.9 314 40.1
CDE02G4301 Ceratophyllum demersum HOM05D006689 ORTHO05D008349 2.0e-50 203.8 172 57.0
EL10Ac7g16816 Beta vulgaris HOM05D006689 ORTHO05D008349 2.6e-50 203.4 144 64.6
Glyma.19G197900 Glycine max HOM05D006689 ORTHO05D008349 4.4e-50 202.6 308 38.3
PGSC0003DMG400016416 Solanum tuberosum HOM05D006689 ORTHO05D008349 4.3e-45 186.0 149 58.4
BolC3t16769H Brassica oleracea HOM05D006689 ORTHO05D008349 7.3e-45 185.3 124 66.9
Gohir.A04G061300 Gossypium hirsutum HOM05D006689 ORTHO05D008349 1.8e-43 180.6 104 77.9
Gohir.A04G061585 Gossypium hirsutum HOM05D006689 ORTHO05D008349 4.4e-42 176.0 129 65.9
vmacro07460 Vaccinium macrocarpon HOM05D006689 ORTHO05D008349 7.0e-40 168.7 410 32.2
unitig_22.g6018 Utricularia gibba HOM05D006689 ORTHO05D008349 3.1e-35 153.3 178 40.4
COL.COLO4_29616 Corchorus olitorius HOM05D006689 ORTHO05D008349 7.5e-34 148.7 84 77.4
SGA_v2.0_scaffold184G40008 Striga asiatica HOM05D006689 ORTHO05D008349 4.1e-32 142.9 98 64.3
Aa31LG3G5020 Aethionema arabicum HOM05D006689 ORTHO05D008349 2.5e-29 133.7 79 73.4
CDE02G1185 Ceratophyllum demersum HOM05D006689 ORTHO05D008349 2.1e-28 130.6 95 61.1
Ah.08g210180 Amaranthus hybridus HOM05D006689 ORTHO05D008349 4.0e-27 126.3 76 71.1
MCO04G525 Micromonas commoda HOM05D006689 ORTHO05D008349 1.7e-25 120.9 291 29.6
Actinidia03903 Actinidia chinensis HOM05D006689 ORTHO05D008349 8.4e-25 118.6 145 51.7
Cre09.g388319 Chlamydomonas reinhardtii HOM05D006689 ORTHO05D008349 4.1e-24 116.3 338 27.2
PRCOL_00001274 Prasinoderma coloniale HOM05D006689 ORTHO05D008349 1.8e-19 100.9 295 28.5
RcHm_v2.0_Chr3g0475321 Rosa chinensis HOM05D006689 ORTHO05D008349 9.0e-19 98.6 61 72.1
Hma1.2p1_1624F.1_g294270 Hydrangea macrophylla HOM05D000554 ORTHO05D000860 1.7e-09 67.8 45 66.7
Sabra16G0075600 Salix brachista HOM05D006689 ORTHO05D008349 2.2e-09 67.4 43 72.1
Cfa021542 Carpinus fangiana HOM05D000750 ORTHO05D011662 3.8e-09 66.6 50 66.0
arahy.Tifrunner.gnm1.ann1.HW4B1R Arachis hypogaea HOM05D006689 ORTHO05D008349 1.0e-06 58.5 51 49.0
Ca_12392_v3 Cicer arietinum L. HOM05D000112 ORTHO05D023238 1.0e-06 58.5 49 61.2
Hund19874 Selenicereus undatus HOM05D006689 ORTHO05D008349 3.0e-06 57.0 40 62.5


User provided reference genes

Program Settings