Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.016G063800 Populus trichocarpa HOM05D003229 ORTHO05D003835 5.3e-145 517.7 266 100.0
TWI74G0877 Tripterygium wilfordii HOM05D003229 ORTHO05D003835 5.1e-39 165.6 236 42.4
Dinv32144 Davidia involucrata HOM05D003229 ORTHO05D003835 1.1e-38 164.5 176 56.2
PSO384G4356 Papaver somniferum HOM05D003229 ORTHO05D003835 2.5e-38 163.3 226 44.7
Gorai.010G139700 Gossypium raimondii HOM05D003229 ORTHO05D003835 3.3e-38 162.9 157 57.3
GSVIVG01037516001 Vitis vinifera HOM05D003229 ORTHO05D003835 4.3e-38 162.5 234 45.7
PSO339G4047 Papaver somniferum HOM05D003229 ORTHO05D003835 7.4e-38 161.8 220 44.5
Gohir.A13G086615 Gossypium hirsutum HOM05D003229 ORTHO05D003835 9.7e-38 161.4 157 57.3
Gohir.D13G092701 Gossypium hirsutum HOM05D003229 ORTHO05D003835 9.7e-38 161.4 157 56.7
CiPaw.13G105300 Carya illinoinensis HOM05D003229 ORTHO05D003835 2.2e-37 160.2 210 47.6
Cfa010230 Carpinus fangiana HOM05D003229 ORTHO05D003835 2.8e-37 159.8 208 48.1
Duzib177G0022 Durio zibethinus HOM05D003229 ORTHO05D003835 3.7e-37 159.5 272 40.4
Peaxi162Scf01091g00018 Petunia axillaris HOM05D003229 ORTHO05D003835 4.8e-37 159.1 171 52.0
Hma1.2p1_0218F.1_g092270 Hydrangea macrophylla HOM05D003229 ORTHO05D003835 1.1e-36 157.9 202 46.5
TWI31G0893 Tripterygium wilfordii HOM05D003229 ORTHO05D003835 1.1e-36 157.9 210 46.7
Haze_23616 Corylus avellana HOM05D003229 ORTHO05D003835 3.1e-36 156.4 270 40.0
PGSC0003DMG400002995 Solanum tuberosum HOM05D003229 ORTHO05D003835 3.1e-36 156.4 195 45.6
Atru.chr3.3041 Acer truncatum HOM05D003229 ORTHO05D003835 5.3e-36 155.6 235 45.1
arahy.Tifrunner.gnm1.ann1.B3GIUW Arachis hypogaea HOM05D003229 ORTHO05D003835 1.2e-35 154.5 188 47.9
Ciclev10028298m.g Citrus clementina HOM05D003229 ORTHO05D003835 2.0e-35 153.7 243 37.4
THA.LOC104810972 Tarenaya hassleriana HOM05D003229 ORTHO05D003835 2.6e-35 153.3 208 45.2
Sopen11g029360 Solanum pennellii HOM05D003229 ORTHO05D003835 3.4e-35 152.9 195 48.2
Manes.04G063962 Manihot esculenta HOM05D003229 ORTHO05D003835 7.6e-35 151.8 216 39.8
ECA238G1805 Erigeron canadensis HOM05D000006 ORTHO05D000001 2.2e-34 150.2 138 63.0
HanXRQChr05g0137001 Helianthus annuus HOM05D003229 ORTHO05D003835 2.2e-34 150.2 156 57.1
SGA_v2.0_scaffold82G26251 Striga asiatica HOM05D003229 ORTHO05D003835 2.2e-34 150.2 189 46.6
COL.COLO4_29455 Corchorus olitorius HOM05D003229 ORTHO05D003835 2.9e-34 149.8 245 40.4
Oeu048813.5 Olea europaea HOM05D003229 ORTHO05D003835 2.9e-34 149.8 153 55.6
SGA_v2.0_scaffold16G07545 Striga asiatica HOM05D003229 ORTHO05D003835 2.9e-34 149.8 189 47.6
Gohir.A13G089500 Gossypium hirsutum HOM05D003229 ORTHO05D003835 5.0e-34 149.1 188 42.6
LjContig00564g0024504 Lotus japonicus HOM05D003229 ORTHO05D003835 6.5e-34 148.7 168 50.6
Migut.N02427 Erythranthe guttata HOM05D003229 ORTHO05D003835 8.5e-34 148.3 176 48.9
Lsat_1_v5_gn_0_39260 Lactuca sativa HOM05D003229 ORTHO05D003835 8.5e-34 148.3 200 46.5
Lj2C839T18 Lonicera japonica HOM05D003229 ORTHO05D003835 8.5e-34 148.3 165 52.7
QL01p018824 Quercus lobata HOM05D003229 ORTHO05D003835 1.1e-33 147.9 176 51.1
TWI79G1121 Tripterygium wilfordii HOM05D003229 ORTHO05D003835 1.1e-33 147.9 211 45.0
Oeu048812.1 Olea europaea HOM05D003229 ORTHO05D003835 1.9e-33 147.1 153 54.9
Solyc11g071690.3 Solanum lycopersicum HOM05D003229 ORTHO05D003835 3.2e-33 146.4 195 46.7
Cpa.g.sc103.35 Carica papaya HOM05D003229 ORTHO05D003835 5.5e-33 145.6 166 50.6
Cc01_g08150 Coffea canephora HOM05D003229 ORTHO05D003835 7.2e-33 145.2 176 49.4
Lalb_Chr17g0347381 Lupinus albus HOM05D003229 ORTHO05D003835 9.3e-33 144.8 148 57.4
Eucgr.J00598 Eucalyptus grandis HOM05D003229 ORTHO05D003835 1.2e-32 144.4 187 47.1
THA.LOC104799740 Tarenaya hassleriana HOM05D003229 ORTHO05D003835 1.6e-32 144.1 207 40.1
PGR119G2320 Punica granatum HOM05D003229 ORTHO05D003835 2.1e-32 143.7 153 52.9
Ciclev10011928m.g Citrus clementina HOM05D003229 ORTHO05D003835 4.6e-32 142.5 167 44.9
Sc21g0006640 Simmondsia chinensis HOM05D003229 ORTHO05D003835 4.6e-32 142.5 187 46.0
A06p22470 Brassica napus HOM05D003229 ORTHO05D003835 6.1e-32 142.1 204 42.6
A06p22530 Brassica napus HOM05D003229 ORTHO05D003835 6.1e-32 142.1 204 42.6
Gohir.D13G092751 Gossypium hirsutum HOM05D003229 ORTHO05D003835 6.1e-32 142.1 213 46.0
Gohir.D04G093700 Gossypium hirsutum HOM05D003229 ORTHO05D003835 7.9e-32 141.7 254 33.1
Nn2g14458 Nelumbo nucifera HOM05D003229 ORTHO05D003835 7.9e-32 141.7 277 38.3
Sed0019248 Sechium edule HOM05D003229 ORTHO05D003835 7.9e-32 141.7 203 46.8
BraA06t25329Z Brassica rapa HOM05D003229 ORTHO05D003835 1.0e-31 141.4 204 42.2
Thhalv10020505m.g Eutrema salsugineum HOM05D003229 ORTHO05D003835 1.4e-31 141.0 219 41.1
Carub.0005s0931 Capsella rubella HOM05D003229 ORTHO05D003835 1.8e-31 140.6 236 39.0
C03p68590 Brassica napus HOM05D003229 ORTHO05D003835 2.3e-31 140.2 216 39.8
BolC3t19117H Brassica oleracea HOM05D003229 ORTHO05D003835 2.3e-31 140.2 216 39.8
DCAR_012260 Daucus carota HOM05D003229 ORTHO05D003835 2.3e-31 140.2 209 44.0
Nitab4.5_0010116g0010 Nicotiana tabacum HOM05D003229 ORTHO05D003835 3.0e-31 139.8 221 38.0
Ah.08g222380 Amaranthus hybridus HOM05D003229 ORTHO05D003835 8.8e-31 138.3 182 48.9
AL5G21420 Arabidopsis lyrata HOM05D003229 ORTHO05D003835 8.8e-31 138.3 223 42.2
Phvul.006G006900 Phaseolus vulgaris HOM05D003229 ORTHO05D003835 8.8e-31 138.3 232 40.9
CSS0043544 Camellia sinensis var. sinensis HOM05D003229 ORTHO05D003835 1.1e-30 137.9 143 54.5
GSVIVG01022494001 Vitis vinifera HOM05D003229 ORTHO05D003835 1.5e-30 137.5 178 42.1
arahy.Tifrunner.gnm1.ann1.M286MP Arachis hypogaea HOM05D003229 ORTHO05D003835 1.9e-30 137.1 192 43.8
Glyma.13G028000 Glycine max HOM05D003229 ORTHO05D003835 1.9e-30 137.1 168 51.8
Sed0028007 Sechium edule HOM05D003229 ORTHO05D003835 1.9e-30 137.1 192 45.8
TAR636G2352 Trochodendron aralioides HOM05D003229 ORTHO05D003835 1.9e-30 137.1 226 41.2
CARHR287360 Cardamine hirsuta HOM05D003229 ORTHO05D003835 2.5e-30 136.7 227 40.1
ECA240G3284 Erigeron canadensis HOM05D003229 ORTHO05D003835 2.5e-30 136.7 141 53.9
Duzib128G1455 Durio zibethinus HOM05D003229 ORTHO05D003835 7.4e-30 135.2 215 36.7
CANSAT54G2724 Cannabis sativa HOM05D003229 ORTHO05D003835 1.7e-29 134.0 189 44.4
VMungo0540G0117 Vigna mungo HOM05D003229 ORTHO05D003835 2.2e-29 133.7 193 46.1
Lj6g0007817 Lotus japonicus HOM05D003229 ORTHO05D003835 3.7e-29 132.9 207 43.5
Atru.chr8.1245 Acer truncatum HOM05D003229 ORTHO05D003835 4.8e-29 132.5 223 36.8
EL10Ac7g16254 Beta vulgaris HOM05D003229 ORTHO05D003835 4.8e-29 132.5 159 52.2
MSTRG.12405 Avicennia marina HOM05D003229 ORTHO05D003835 1.1e-28 131.3 181 44.8
MELO3C017380.2 Cucumis melo HOM05D003229 ORTHO05D003835 1.1e-28 131.3 216 38.0
Gorai.010G139800 Gossypium raimondii HOM05D003229 ORTHO05D003835 1.4e-28 131.0 210 44.8
AL5G21520 Arabidopsis lyrata HOM05D003229 ORTHO05D003835 1.8e-28 130.6 246 36.2
AT3G43590 Arabidopsis thaliana HOM05D003229 ORTHO05D003835 1.8e-28 130.6 273 34.8
Hund20968 Selenicereus undatus HOM05D003229 ORTHO05D003835 1.8e-28 130.6 186 44.6
Thecc.05G214900 Theobroma cacao HOM05D003229 ORTHO05D003835 1.8e-28 130.6 155 50.3
Ca_16267_v3 Cicer arietinum L. HOM05D003229 ORTHO05D009053 6.9e-28 128.6 202 44.1
Sp5g17570 Schrenkiella parvula HOM05D003229 ORTHO05D003835 6.9e-28 128.6 218 38.1
CDE05G3619 Ceratophyllum demersum HOM05D003229 ORTHO05D003835 1.2e-27 127.9 163 48.5
CARHR267130 Cardamine hirsuta HOM05D003229 ORTHO05D003835 1.5e-27 127.5 234 38.0
Thhalv10019590m.g Eutrema salsugineum HOM05D003229 ORTHO05D003835 1.5e-27 127.5 221 38.5
Aa31LG4G13390 Aethionema arabicum HOM05D003229 ORTHO05D003835 2.6e-27 126.7 260 34.6
Carub.0005s0918 Capsella rubella HOM05D003229 ORTHO05D003835 7.7e-27 125.2 215 40.0
Gorai.009G396300 Gossypium raimondii HOM05D003229 ORTHO05D003835 1.0e-26 124.8 225 33.3
Solyc06g073810.4 Solanum lycopersicum HOM05D003229 ORTHO05D003835 1.3e-26 124.4 225 41.8
CSS0045009 Camellia sinensis var. sinensis HOM05D003229 ORTHO05D003835 6.5e-26 122.1 181 45.3
Ca_06127_v3 Cicer arietinum L. HOM05D003229 ORTHO05D003835 1.1e-25 121.3 152 44.7
Hma1.2p1_0127F.1_g059620 Hydrangea macrophylla HOM05D003229 ORTHO05D003835 1.4e-25 120.9 221 38.9
Oeu058180.2 Olea europaea HOM05D003229 ORTHO05D003835 1.2e-24 117.9 232 36.2
Psat2g023800 Pisum sativum HOM05D003229 ORTHO05D003835 2.1e-24 117.1 164 43.9
SEGI_34455 Sequoiadendron giganteum HOM05D003229 ORTHO05D003835 2.7e-24 116.7 209 38.3
MSTRG.26568 Avicennia marina HOM05D003229 ORTHO05D003835 3.6e-24 116.3 173 39.3
TPR.G15596 Trifolium pratense HOM05D003229 ORTHO05D003835 1.0e-23 114.8 161 47.8
PGSC0003DMG400005910 Solanum tuberosum HOM05D003229 ORTHO05D003835 1.4e-23 114.4 191 44.0
TPR.G13300 Trifolium pratense HOM05D003229 ORTHO05D003835 1.8e-23 114.0 151 45.7
Sabra09G0121900 Salix brachista HOM05D003229 ORTHO05D003835 2.3e-23 113.6 138 53.6
Lalb_Chr13g0294131 Lupinus albus HOM05D003229 ORTHO05D003835 3.9e-23 112.8 165 45.5
MD03G1161300 Malus domestica HOM05D003229 ORTHO05D003835 3.9e-23 112.8 200 40.5
HanXRQChr03g0089231 Helianthus annuus HOM05D003229 ORTHO05D003835 8.8e-23 111.7 245 31.0
Peaxi162Scf00355g00005 Petunia axillaris HOM05D003229 ORTHO05D003835 1.1e-22 111.3 163 50.3
Sopen06g030210 Solanum pennellii HOM05D003229 ORTHO05D003835 1.5e-22 110.9 191 44.0
EL10Ac5g11782 Beta vulgaris HOM05D003229 ORTHO05D003835 2.6e-22 110.2 184 34.8
Glyma.20G055200 Glycine max HOM05D003229 ORTHO05D003835 2.6e-22 110.2 169 45.0
Manes.11G104500 Manihot esculenta HOM05D003229 ORTHO05D003835 4.4e-22 109.4 155 43.2
RcHm_v2.0_Chr6g0255381 Rosa chinensis HOM05D003229 ORTHO05D003835 3.7e-21 106.3 176 44.3
BcaB01g02976 Brassica carinata HOM05D003229 ORTHO05D003835 1.1e-20 104.8 207 31.9
CDE01G0204 Ceratophyllum demersum HOM05D003229 ORTHO05D003835 1.4e-20 104.4 164 43.9
Nitab4.5_0013078g0010 Nicotiana tabacum HOM05D003229 ORTHO05D003835 3.1e-20 103.2 91 52.7
C03p32850 Brassica napus HOM05D003229 ORTHO05D003835 5.3e-20 102.4 177 32.8
Rhsim01G0198100 Rhododendron simsii HOM05D003229 ORTHO05D003835 5.3e-20 102.4 148 48.0
Duzib128G0535 Durio zibethinus HOM05D003229 ORTHO05D003835 6.9e-20 102.1 175 36.0
Potri.009G155500 Populus trichocarpa HOM05D003229 ORTHO05D003835 6.9e-20 102.1 148 48.0
BolC3t15620H Brassica oleracea HOM05D003229 ORTHO05D003835 1.2e-19 101.3 195 30.8
Nitab4.5_0000875g0020 Nicotiana tabacum HOM05D003229 ORTHO05D003835 1.5e-19 100.9 114 47.4
vmacro14302 Vaccinium macrocarpon HOM05D003229 ORTHO05D003835 1.5e-19 100.9 159 45.3
A03p27320 Brassica napus HOM05D003229 ORTHO05D003835 4.5e-19 99.4 214 32.2
BraA03t11943Z Brassica rapa HOM05D003229 ORTHO05D003835 4.5e-19 99.4 214 32.2
A09p57240 Brassica napus HOM05D003229 ORTHO05D003835 7.7e-19 98.6 141 36.2
BraA09t41117Z Brassica rapa HOM05D003229 ORTHO05D003835 7.7e-19 98.6 154 35.1
Sabra04G0131600 Salix brachista HOM05D003229 ORTHO05D003835 7.7e-19 98.6 133 48.9
Nitab4.5_0002498g0020 Nicotiana tabacum HOM05D003229 ORTHO05D003835 1.7e-18 97.4 197 34.0
Actinidia12901 Actinidia chinensis HOM05D003229 ORTHO05D003835 2.2e-18 97.1 156 46.2
ATR0697G070 Amborella trichopoda HOM05D003229 ORTHO05D003835 2.2e-18 97.1 201 39.8
BcaC07g41025 Brassica carinata HOM05D003229 ORTHO05D003835 2.2e-18 97.1 151 35.1
C08p40280 Brassica napus HOM05D003229 ORTHO05D003835 2.2e-18 97.1 151 35.1
BolC8t51596H Brassica oleracea HOM05D003229 ORTHO05D003835 2.2e-18 97.1 151 35.1
CsaV3_1G004530 Cucumis sativus L. HOM05D003229 ORTHO05D003835 5.0e-18 95.9 138 48.6
CBR_g8477 Chara braunii HOM05D003229 ORTHO05D000407 4.2e-17 92.8 218 32.6
Nitab4.5_0002595g0030 Nicotiana tabacum HOM05D003229 ORTHO05D003835 9.4e-17 91.7 121 37.2
Thecc.05G181700 Theobroma cacao HOM05D003229 ORTHO05D003835 2.1e-16 90.5 223 32.3
AUR62036294 Chenopodium quinoa HOM05D003229 ORTHO05D003835 2.7e-16 90.1 172 30.2
Nitab4.5_0000117g0180 Nicotiana tabacum HOM05D003229 ORTHO05D003835 4.7e-16 89.4 121 34.7
AUR62020197 Chenopodium quinoa HOM05D003229 ORTHO05D003835 1.0e-15 88.2 210 29.0
FvH4_2g05241 Fragaria vesca HOM05D003229 ORTHO05D003835 1.0e-15 88.2 172 40.7
FAN27G0679 Fragaria x ananassa HOM05D003229 ORTHO05D003835 1.0e-15 88.2 172 40.7
MBI11_g25050_MAGBIO Magnolia biondii HOM05D003229 ORTHO05D003835 1.8e-15 87.4 255 28.2
FAN24G0320 Fragaria x ananassa HOM05D003229 ORTHO05D003835 2.3e-15 87.0 172 40.1
MBI05_g37661_MAGBIO Magnolia biondii HOM05D003229 ORTHO05D003835 2.3e-15 87.0 78 47.4
CAN.G481.58 Capsicum annuum HOM05D004333 ORTHO05D005363 3.0e-15 86.7 155 34.2
Sp4g01780 Schrenkiella parvula HOM05D003229 ORTHO05D003835 3.0e-15 86.7 92 43.5
AUR62001585 Chenopodium quinoa HOM05D003229 ORTHO05D003835 1.5e-14 84.3 245 26.1
ClCG06G014150 Citrullus lanatus HOM05D003229 ORTHO05D003835 3.3e-14 83.2 198 29.3
Thhalv10002168m.g Eutrema salsugineum HOM05D003229 ORTHO05D003835 3.3e-14 83.2 113 46.9
FAN15G3758 Fragaria x ananassa HOM05D003229 ORTHO05D003835 5.7e-14 82.4 98 46.9
FAN20G2341 Fragaria x ananassa HOM05D003229 ORTHO05D003835 5.7e-14 82.4 98 46.9
Thhalv10002930m.g Eutrema salsugineum HOM05D003229 ORTHO05D003835 9.7e-14 81.6 208 27.9
Os11g0575200 Oryza sativa ssp. japonica HOM05D003229 ORTHO05D003835 9.7e-14 81.6 148 45.3
Hund15039 Selenicereus undatus HOM05D003229 ORTHO05D003835 1.3e-13 81.3 199 28.1
DCAR_022907 Daucus carota HOM05D003633 ORTHO05D004245 2.8e-13 80.1 145 32.4
Solyc01g056760.3 Solanum lycopersicum HOM05D003229 ORTHO05D003835 3.7e-13 79.7 133 30.8
Lsat_1_v5_gn_3_111681 Lactuca sativa HOM05D003229 ORTHO05D003835 1.1e-12 78.2 183 35.5
Oeu047795.1 Olea europaea HOM05D003229 ORTHO05D003835 1.4e-12 77.8 60 53.3
Sopen01g025320 Solanum pennellii HOM05D000006 ORTHO05D000001 3.1e-12 76.6 139 40.3
CANSAT35G0213 Cannabis sativa HOM05D003229 ORTHO05D003835 9.1e-12 75.1 180 35.6
HPP92_026334 Vanilla planifolia HOM05D003229 ORTHO05D003835 9.1e-12 75.1 134 38.8
Ah.12g059520 Amaranthus hybridus HOM05D003229 ORTHO05D003835 1.2e-11 74.7 172 27.9
CSS0010675 Camellia sinensis var. sinensis HOM05D003229 ORTHO05D003835 1.2e-11 74.7 96 44.8
Haze_22516 Corylus avellana HOM05D003229 ORTHO05D017800 1.2e-11 74.7 168 33.9
Potri.004G193500 Populus trichocarpa HOM05D003229 ORTHO05D003835 1.2e-11 74.7 138 41.3
Rhsim13G0199400 Rhododendron simsii HOM05D003229 ORTHO05D003835 1.2e-11 74.7 74 47.3
AUR62038407 Chenopodium quinoa HOM05D003229 ORTHO05D003835 7.7e-11 72.0 153 28.8
AL7G45170 Arabidopsis lyrata HOM05D003229 ORTHO05D003835 1.0e-10 71.6 80 38.8
Thhalv10023543m.g Eutrema salsugineum HOM05D003229 ORTHO05D003835 1.1e-09 68.2 60 45.0
QL08p055973 Quercus lobata HOM05D006567 ORTHO05D015939 2.5e-09 67.0 69 49.3
Mapoly0019s0115 Marchantia polymorpha HOM05D003229 ORTHO05D003835 3.2e-09 66.6 152 36.2
vmacro04054 Vaccinium macrocarpon HOM05D003229 ORTHO05D003835 5.5e-09 65.9 85 40.0
Lj2C419T7 Lonicera japonica HOM05D003229 ORTHO05D003835 7.2e-09 65.5 91 35.2
Sabra04G0131800 Salix brachista HOM05D003229 ORTHO05D003835 9.4e-09 65.1 64 50.0
Prupe.6G179900 Prunus persica HOM05D003229 ORTHO05D003835 2.1e-08 63.9 62 46.8
Zm00001eb200300 Zea mays HOM05D003229 ORTHO05D003835 2.1e-08 63.9 137 38.0
AT5G36240 Arabidopsis thaliana HOM05D003229 ORTHO05D003835 2.7e-08 63.5 40 60.0
SGA_v2.0_scaffold392G50668 Striga asiatica HOM05D003229 ORTHO05D003835 1.0e-07 61.6 132 29.5
Psat5g107520 Pisum sativum HOM05D003229 ORTHO05D003835 1.8e-07 60.8 34 67.6
Gohir.A04G056400 Gossypium hirsutum HOM05D003229 ORTHO05D003835 2.3e-07 60.5 222 24.8
AT3G43490 Arabidopsis thaliana HOM05D003229 ORTHO05D003835 3.0e-07 60.1 141 32.6
Aqoxy1G00567 Aquilegia oxysepala HOM05D003229 ORTHO05D003835 6.7e-07 58.9 99 37.4
QL02p079790 Quercus lobata HOM05D003229 ORTHO05D003835 8.8e-07 58.5 151 33.8
Os11g0573200 Oryza sativa ssp. japonica HOM05D003229 ORTHO05D003835 2.0e-06 57.4 37 62.2


User provided reference genes

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