Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.016G060000 Populus trichocarpa HOM05D007056 ORTHO05D008278 1.7e-148 529.3 261 100.0
Sabra16G0062800 Salix brachista HOM05D007056 ORTHO05D008278 4.7e-138 494.6 261 94.3
CiPaw.09G028900 Carya illinoinensis HOM05D007056 ORTHO05D008278 4.9e-111 404.8 263 76.4
Lalb_Chr18g0048001 Lupinus albus HOM05D007056 ORTHO05D008278 2.3e-108 396.0 261 73.9
Ciclev10012466m.g Citrus clementina HOM05D007056 ORTHO05D008278 1.5e-107 393.3 268 74.6
Nn2g15729 Nelumbo nucifera HOM05D007056 ORTHO05D008278 1.5e-107 393.3 262 74.8
Cfa020149 Carpinus fangiana HOM05D007056 ORTHO05D008278 2.5e-107 392.5 263 74.1
Prupe.7G080200 Prunus persica HOM05D007056 ORTHO05D008278 7.3e-107 391.0 268 73.5
Dinv16370 Davidia involucrata HOM05D007056 ORTHO05D008278 1.6e-106 389.8 261 73.2
QL07p024320 Quercus lobata HOM05D007056 ORTHO05D008278 2.1e-106 389.4 262 73.3
QL07p024358 Quercus lobata HOM05D007056 ORTHO05D008278 2.1e-106 389.4 262 73.3
MD14G1054600 Malus domestica HOM05D007056 ORTHO05D008278 3.6e-106 388.7 276 71.0
Actinidia38590 Actinidia chinensis HOM05D007056 ORTHO05D008278 6.2e-106 387.9 268 72.8
Thecc.05G174400 Theobroma cacao HOM05D007056 ORTHO05D008278 1.1e-105 387.1 271 72.3
Cpa.g.sc85.61 Carica papaya HOM05D007056 ORTHO05D008278 1.4e-105 386.7 263 74.9
TAR369G0080 Trochodendron aralioides HOM05D007056 ORTHO05D008278 1.4e-105 386.7 270 71.5
PGR142G3072 Punica granatum HOM05D007056 ORTHO05D008278 1.8e-105 386.3 264 72.0
CANSAT64G0992 Cannabis sativa HOM05D007056 ORTHO05D008278 9.0e-105 384.0 264 73.1
Ca_08534_v3 Cicer arietinum L. HOM05D007056 ORTHO05D008278 9.0e-105 384.0 261 73.6
Duzib093G0790 Durio zibethinus HOM05D007056 ORTHO05D008278 9.0e-105 384.0 273 72.2
CSS0008084 Camellia sinensis var. sinensis HOM05D007056 ORTHO05D008278 1.2e-104 383.6 263 71.9
Gorai.012G099400 Gossypium raimondii HOM05D007056 ORTHO05D008278 1.2e-104 383.6 263 73.0
Gohir.D04G089300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 2.6e-104 382.5 263 73.0
RcHm_v2.0_Chr3g0479281 Rosa chinensis HOM05D007056 ORTHO05D008278 4.5e-104 381.7 262 72.5
TWI77G0776 Tripterygium wilfordii HOM05D007056 ORTHO05D008278 4.9e-103 378.3 263 74.1
Lj1g0028043 Lotus japonicus HOM05D007056 ORTHO05D008278 6.4e-103 377.9 260 72.3
VMungo1383G1827 Vigna mungo HOM05D007056 ORTHO05D008278 6.4e-103 377.9 259 73.0
Glyma.19G149400 Glycine max HOM05D007056 ORTHO05D008278 8.4e-103 377.5 259 71.4
FAN09G4108 Fragaria x ananassa HOM05D007056 ORTHO05D008278 1.1e-102 377.1 263 73.0
Atru.chr8.1149 Acer truncatum HOM05D007056 ORTHO05D008278 5.5e-102 374.8 262 71.8
Aqoxy2G00097 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 9.3e-102 374.0 259 71.8
Eucgr.K01848 Eucalyptus grandis HOM05D007056 ORTHO05D008278 4.6e-101 371.7 207 81.6
arahy.Tifrunner.gnm1.ann1.DK1M71 Arachis hypogaea HOM05D007056 ORTHO05D008278 6.0e-101 371.3 261 72.0
Lj2A365G87 Lonicera japonica HOM05D007056 ORTHO05D008278 6.0e-101 371.3 201 85.1
EL10Ac3g06891 Beta vulgaris HOM05D007056 ORTHO05D008278 1.3e-100 370.2 260 68.8
FAN14G2508 Fragaria x ananassa HOM05D007056 ORTHO05D008278 1.3e-100 370.2 266 71.1
SGA_v2.0_scaffold69G23055 Striga asiatica HOM05D007056 ORTHO05D008278 1.8e-100 369.8 209 82.3
arahy.Tifrunner.gnm1.ann1.LTU6F0 Arachis hypogaea HOM05D007056 ORTHO05D008278 5.1e-100 368.2 259 70.7
Carub.0003s1138 Capsella rubella HOM05D007056 ORTHO05D008278 5.1e-100 368.2 257 71.2
Medtr7g093540 Medicago truncatula HOM05D007056 ORTHO05D008278 8.7e-100 367.5 268 68.3
AT3G12040 Arabidopsis thaliana HOM05D007056 ORTHO05D008278 1.9e-99 366.3 231 75.8
CsaV3_3G038650 Cucumis sativus L. HOM05D007056 ORTHO05D008278 1.9e-99 366.3 265 67.9
A05p37300 Brassica napus HOM05D007056 ORTHO05D008278 2.5e-99 365.9 256 69.5
BraA05t22526Z Brassica rapa HOM05D007056 ORTHO05D008278 3.3e-99 365.5 260 68.5
BcaB06g25552 Brassica carinata HOM05D007056 ORTHO05D008278 4.3e-99 365.2 262 69.8
AL3G23650 Arabidopsis lyrata HOM05D007056 ORTHO05D008278 1.3e-98 363.6 231 74.9
MBI19_g17420_MAGBIO Magnolia biondii HOM05D007056 ORTHO05D008278 1.3e-98 363.6 262 69.8
COL.COLO4_05956 Corchorus olitorius HOM05D007056 ORTHO05D008278 2.1e-98 362.8 279 67.0
AUR62011999 Chenopodium quinoa HOM05D007056 ORTHO05D008278 3.7e-98 362.1 262 67.9
Ah.04g152820 Amaranthus hybridus HOM05D007056 ORTHO05D008278 4.8e-98 361.7 262 67.6
Cc06_g15700 Coffea canephora HOM05D007056 ORTHO05D008278 6.2e-98 361.3 263 68.4
HanXRQChr01g0010031 Helianthus annuus HOM05D007056 ORTHO05D008278 1.1e-97 360.5 261 68.2
CARHR086600 Cardamine hirsuta HOM05D007056 ORTHO05D008278 1.4e-97 360.1 240 72.1
Phvul.001G143900 Phaseolus vulgaris HOM05D007056 ORTHO05D008278 1.8e-97 359.8 258 69.8
Os02g0774500 Oryza sativa ssp. japonica HOM05D007056 ORTHO05D008278 2.4e-97 359.4 194 84.0
Sp3g10270 Schrenkiella parvula HOM05D007056 ORTHO05D008278 4.0e-97 358.6 256 69.9
ATR0598G297 Amborella trichopoda HOM05D007056 ORTHO05D008278 9.0e-97 357.5 197 83.2
BcaC05g29295 Brassica carinata HOM05D007056 ORTHO05D008278 1.2e-96 357.1 253 68.4
Thhalv10021378m.g Eutrema salsugineum HOM05D007056 ORTHO05D008278 1.2e-96 357.1 238 72.3
GSVIVG01033475001 Vitis vinifera HOM05D007056 ORTHO05D008278 1.2e-96 357.1 282 66.0
Zm00001eb256530 Zea mays HOM05D007056 ORTHO05D008278 2.0e-96 356.3 257 68.9
CAN.G128.50 Capsicum annuum HOM05D007056 ORTHO05D008278 1.3e-95 353.6 195 84.6
AUR62015338 Chenopodium quinoa HOM05D007056 ORTHO05D008278 1.3e-95 353.6 262 67.2
THA.LOC104809936 Tarenaya hassleriana HOM05D007056 ORTHO05D008278 1.3e-95 353.6 259 65.3
C05p55770 Brassica napus HOM05D007056 ORTHO05D008278 2.9e-95 352.4 254 68.1
BolC5t34244H Brassica oleracea HOM05D007056 ORTHO05D008278 2.9e-95 352.4 254 68.1
PGSC0003DMG400023706 Solanum tuberosum HOM05D007056 ORTHO05D008278 3.8e-95 352.1 264 68.2
Solyc10g080560.2 Solanum lycopersicum HOM05D007056 ORTHO05D008278 6.5e-95 351.3 264 68.2
Nitab4.5_0001079g0030 Nicotiana tabacum HOM05D007056 ORTHO05D008278 1.1e-94 350.5 222 76.1
Sopen10g031100 Solanum pennellii HOM05D007056 ORTHO05D008278 1.9e-94 349.7 264 67.8
Rhsim04G0094900 Rhododendron simsii HOM05D007056 ORTHO05D008278 5.5e-94 348.2 272 65.4
HPP92_004381 Vanilla planifolia HOM05D007056 ORTHO05D008278 1.8e-92 343.2 258 67.8
DCAR_019779 Daucus carota HOM05D007056 ORTHO05D008278 6.7e-92 341.3 236 69.9
TPR.G35780 Trifolium pratense HOM05D007056 ORTHO05D008278 6.7e-92 341.3 257 66.5
Lsat_1_v5_gn_5_165300 Lactuca sativa HOM05D007056 ORTHO05D008278 8.7e-92 340.9 270 65.6
CDE06G2434 Ceratophyllum demersum HOM05D007056 ORTHO05D008278 3.3e-91 339.0 261 64.8
Aa31sc80G100 Aethionema arabicum HOM05D007056 ORTHO05D008278 7.4e-91 337.8 211 75.4
SEGI_25756 Sequoiadendron giganteum HOM05D007056 ORTHO05D008278 1.5e-88 330.1 198 76.3
Peaxi162Scf00249g01221 Petunia axillaris HOM05D007056 ORTHO05D008278 3.4e-88 328.9 268 62.7
unitig_27.g25110 Utricularia gibba HOM05D007056 ORTHO05D008278 4.5e-88 328.6 251 64.5
AagrBONN_evm.TU.Sc2ySwM_344.2853 Anthoceros agrestis HOM05D007056 ORTHO05D008278 5.0e-87 325.1 194 74.7
Hund24814 Selenicereus undatus HOM05D007056 ORTHO05D008278 6.5e-87 324.7 269 63.9
PSO541G5037 Papaver somniferum HOM05D007056 ORTHO05D008278 6.1e-85 318.2 269 62.5
SMO146G0068 Selaginella moellendorffii HOM05D007056 ORTHO05D008278 1.8e-84 316.6 193 75.1
Aqoxy3G01855 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 8.7e-84 314.3 268 60.4
PSO675G9168 Papaver somniferum HOM05D007056 ORTHO05D008278 8.7e-84 314.3 269 59.9
Mapoly0003s0280 Marchantia polymorpha HOM05D007056 ORTHO05D008278 7.4e-83 311.2 240 62.5
Psat3g067120 Pisum sativum HOM05D007056 ORTHO05D008278 9.0e-81 304.3 167 82.0
BcaB06g25551 Brassica carinata HOM05D007056 ORTHO05D008278 8.5e-79 297.7 165 80.6
Oeu024494.3 Olea europaea HOM05D007056 ORTHO05D008278 1.9e-78 296.6 280 58.6
vmacro22110 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 1.9e-78 296.6 349 50.1
ECA248G2501 Erigeron canadensis HOM05D007056 ORTHO05D008278 3.2e-78 295.8 172 77.9
Pp3c1_41490 Physcomitrium patens HOM05D007056 ORTHO05D008278 6.1e-77 291.6 270 54.8
CBR_g48019 Chara braunii HOM05D000019 ORTHO05D000002 7.4e-75 284.6 227 59.9
FvH4_6g21980 Fragaria vesca HOM05D007056 ORTHO05D008278 1.3e-74 283.9 214 69.6
ECA248G2516 Erigeron canadensis HOM05D007056 ORTHO05D008278 1.4e-73 280.4 164 77.4
Sed0027134 Sechium edule HOM05D007056 ORTHO05D008278 1.4e-70 270.4 215 64.7
Gohir.A04G057300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 5.0e-63 245.4 190 67.9
Psat3g067080 Pisum sativum HOM05D007056 ORTHO05D008278 6.7e-60 235.0 188 66.0
Manes.08G042900 Manihot esculenta HOM05D007056 ORTHO05D008278 2.0e-59 233.4 181 68.5
Psat3g067040 Pisum sativum HOM05D007056 ORTHO05D008278 3.3e-59 232.6 248 54.8
Migut.J01851 Erythranthe guttata HOM05D007056 ORTHO05D008278 3.5e-56 222.6 122 83.6
ClCG10G017660 Citrullus lanatus HOM05D007056 ORTHO05D008278 1.6e-53 213.8 210 53.8
Haze_20013 Corylus avellana HOM05D007056 ORTHO05D008278 1.6e-53 213.8 485 34.8
ECA248G3402 Erigeron canadensis HOM05D000009 ORTHO05D000008 8.8e-52 208.0 121 77.7
MELO3C009610.2 Cucumis melo HOM05D007056 ORTHO05D008278 1.5e-51 207.2 262 48.1
FAN02G0430 Fragaria x ananassa HOM05D007056 ORTHO05D008278 3.1e-49 199.5 167 66.5
Sc13g0002370 Simmondsia chinensis HOM05D007056 ORTHO05D008278 1.7e-42 177.2 169 58.0
Nitab4.5_0001440g0050 Nicotiana tabacum HOM05D007056 ORTHO05D008278 1.1e-38 164.5 94 78.7
PRCOL_00003183 Prasinoderma coloniale HOM05D007056 ORTHO05D008278 1.3e-34 151.0 215 45.1
Hma1.2p1_0645F.1_g194860 Hydrangea macrophylla HOM05D007056 ORTHO05D008278 3.2e-33 146.4 73 89.0
ECA233G2032 Erigeron canadensis HOM05D007056 ORTHO05D008278 6.2e-29 132.1 76 75.0
SHI31778 Sapria himalayana HOM05D007056 ORTHO05D008278 1.4e-28 131.0 76 76.3
vmacro22990 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 1.4e-17 94.4 96 53.1
SHI31775 Sapria himalayana HOM05D000002 ORTHO05D000001 4.4e-11 72.8 69 60.9


User provided reference genes

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