Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.016G049700 Populus trichocarpa HOM05D006205 ORTHO05D007703 2.1e-216 755.4 361 100.0
Sabra16G0053600 Salix brachista HOM05D006205 ORTHO05D007703 1.4e-212 742.7 361 97.2
Potri.006G058400 Populus trichocarpa HOM05D006205 ORTHO05D007703 1.6e-205 719.2 361 94.7
Sabra06G0041700 Salix brachista HOM05D006205 ORTHO05D007703 9.9e-203 709.9 361 93.4
Manes.09G031300 Manihot esculenta HOM05D006205 ORTHO05D007703 1.5e-198 696.0 361 90.6
Gorai.002G228500 Gossypium raimondii HOM05D006205 ORTHO05D007703 6.9e-196 687.2 357 89.6
Gohir.A01G194800 Gossypium hirsutum HOM05D006205 ORTHO05D007703 9.0e-196 686.8 357 89.6
CSS0013544 Camellia sinensis var. sinensis HOM05D006205 ORTHO05D007703 2.0e-195 685.6 357 89.1
Actinidia17259 Actinidia chinensis HOM05D006205 ORTHO05D007703 2.6e-195 685.3 361 87.8
Haze_19942 Corylus avellana HOM05D006205 ORTHO05D007703 4.4e-195 684.5 358 89.1
Duzib106G0917 Durio zibethinus HOM05D006205 ORTHO05D007703 5.8e-195 684.1 357 89.6
Prupe.7G072500 Prunus persica HOM05D006205 ORTHO05D007703 2.2e-194 682.2 361 88.4
Dinv24098 Davidia involucrata HOM05D006205 ORTHO05D007703 3.8e-194 681.4 361 87.0
Thecc.05G167100 Theobroma cacao HOM05D006205 ORTHO05D007703 3.8e-194 681.4 357 89.1
Ciclev10031918m.g Citrus clementina HOM05D006205 ORTHO05D007703 4.9e-194 681.0 359 89.1
Gohir.D01G185000 Gossypium hirsutum HOM05D006205 ORTHO05D007703 1.9e-193 679.1 357 88.8
Eucgr.K01821 Eucalyptus grandis HOM05D006205 ORTHO05D007703 1.2e-192 676.4 361 87.3
PGR142G1368 Punica granatum HOM05D006205 ORTHO05D007703 4.6e-192 674.5 361 86.1
Glyma.19G144900 Glycine max HOM05D006205 ORTHO05D007703 5.1e-191 671.0 357 87.7
CiPaw.09G032800 Carya illinoinensis HOM05D006205 ORTHO05D007703 6.6e-191 670.6 359 87.7
Hma1.2p1_1575F.1_g291620 Hydrangea macrophylla HOM05D006205 ORTHO05D007703 6.6e-191 670.6 359 85.8
MSTRG.26097 Avicennia marina HOM05D006205 ORTHO05D007703 8.7e-191 670.2 361 85.3
TAR623G1003 Trochodendron aralioides HOM05D006205 ORTHO05D007703 8.7e-191 670.2 361 86.4
THA.LOC104809921 Tarenaya hassleriana HOM05D006205 ORTHO05D007703 1.1e-190 669.8 357 87.4
Lju124A32T75 Lonicera japonica HOM05D006205 ORTHO05D007703 1.9e-190 669.1 361 85.9
arahy.Tifrunner.gnm1.ann1.ARGW3J Arachis hypogaea HOM05D006205 ORTHO05D007703 7.3e-190 667.2 356 87.1
Nitab4.5_0006846g0010 Nicotiana tabacum HOM05D006205 ORTHO05D007703 7.3e-190 667.2 361 84.2
Cpa.g.sc85.111 Carica papaya HOM05D006205 ORTHO05D007703 1.3e-189 666.4 361 87.8
arahy.Tifrunner.gnm1.ann1.68EW5P Arachis hypogaea HOM05D006205 ORTHO05D007703 1.6e-189 666.0 356 86.8
Duzib093G1988 Durio zibethinus HOM05D006205 ORTHO05D007703 1.6e-189 666.0 357 86.3
DCAR_013564 Daucus carota HOM05D006205 ORTHO05D007703 2.8e-189 665.2 357 86.3
Ca_08497_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 3.6e-189 664.8 361 85.3
Ca_29722_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 3.6e-189 664.8 361 85.3
QL07p022686 Quercus lobata HOM05D006205 ORTHO05D007703 8.1e-189 663.7 359 86.9
Phvul.001G139800 Phaseolus vulgaris HOM05D006205 ORTHO05D007703 3.1e-188 661.8 357 86.3
VMungo1383G0076 Vigna mungo HOM05D006205 ORTHO05D007703 3.1e-188 661.8 357 85.7
Hund19180 Selenicereus undatus HOM05D006205 ORTHO05D007703 6.9e-188 660.6 361 85.3
SGA_v2.0_scaffold94G28443 Striga asiatica HOM05D006205 ORTHO05D007703 6.9e-188 660.6 362 85.1
TPR.G4691 Trifolium pratense HOM05D006205 ORTHO05D007703 1.5e-187 659.4 361 84.5
Lsat_1_v5_gn_8_79241 Lactuca sativa HOM05D006205 ORTHO05D007703 4.5e-187 657.9 361 84.2
CAN.G85.9 Capsicum annuum HOM05D006205 ORTHO05D007703 2.9e-186 655.2 361 83.4
FvH4_6g22800 Fragaria vesca HOM05D006205 ORTHO05D007703 3.8e-186 654.8 360 85.6
FAN14G5729 Fragaria x ananassa HOM05D006205 ORTHO05D007703 3.8e-186 654.8 360 85.6
Psat3g069960 Pisum sativum HOM05D006205 ORTHO05D007703 3.8e-186 654.8 361 84.2
FAN02G0014 Fragaria x ananassa HOM05D006205 ORTHO05D007703 6.4e-186 654.1 360 85.3
Nn2g15532 Nelumbo nucifera HOM05D006205 ORTHO05D007703 1.1e-185 653.3 360 85.6
Sp3g10390 Schrenkiella parvula HOM05D006205 ORTHO05D007703 1.1e-185 653.3 358 84.6
MELO3C009648.2 Cucumis melo HOM05D006205 ORTHO05D007703 1.4e-185 652.9 387 80.1
Lalb_Chr18g0047621 Lupinus albus HOM05D006205 ORTHO05D007703 1.4e-185 652.9 361 84.8
PGSC0003DMG400012937 Solanum tuberosum HOM05D006205 ORTHO05D007703 1.4e-185 652.9 361 82.5
CANSAT64G2514 Cannabis sativa HOM05D006205 ORTHO05D007703 1.9e-185 652.5 357 85.2
FAN05G5560 Fragaria x ananassa HOM05D006205 ORTHO05D007703 1.9e-185 652.5 360 85.3
Thhalv10021002m.g Eutrema salsugineum HOM05D006205 ORTHO05D007703 4.2e-185 651.4 360 83.9
EL10Ac3g06974 Beta vulgaris HOM05D006205 ORTHO05D007703 5.4e-185 651.0 361 83.1
vmacro09103 Vaccinium macrocarpon HOM05D006205 ORTHO05D007703 7.1e-185 650.6 367 83.4
Sc25g0005160 Simmondsia chinensis HOM05D006205 ORTHO05D007703 1.2e-184 649.8 359 83.0
AL3G23830 Arabidopsis lyrata HOM05D006205 ORTHO05D007703 2.1e-184 649.0 358 83.5
Sed0025317 Sechium edule HOM05D006205 ORTHO05D007703 2.7e-184 648.7 357 84.6
AT3G12150 Arabidopsis thaliana HOM05D006205 ORTHO05D007703 3.5e-184 648.3 358 83.8
Medtr7g092680 Medicago truncatula HOM05D006205 ORTHO05D007703 4.6e-184 647.9 357 84.3
A05p37150 Brassica napus HOM05D006205 ORTHO05D007703 1.8e-183 646.0 358 83.5
C05p55580 Brassica napus HOM05D006205 ORTHO05D007703 1.8e-183 646.0 358 83.5
BolC5t34227H Brassica oleracea HOM05D006205 ORTHO05D007703 1.8e-183 646.0 358 83.5
BcaC05g29277 Brassica carinata HOM05D006205 ORTHO05D007703 2.3e-183 645.6 358 83.2
RcHm_v2.0_Chr3g0480421 Rosa chinensis HOM05D006205 ORTHO05D007703 2.3e-183 645.6 360 84.2
Lj1g0022121 Lotus japonicus HOM05D006205 ORTHO05D007703 3.0e-183 645.2 396 77.5
Carub.0003s1152 Capsella rubella HOM05D006205 ORTHO05D007703 3.9e-183 644.8 358 83.2
HanXRQChr05g0132791 Helianthus annuus HOM05D006205 ORTHO05D007703 6.7e-183 644.0 360 82.8
BraA05t22513Z Brassica rapa HOM05D006205 ORTHO05D007703 3.3e-182 641.7 358 82.7
Cc06_g16310 Coffea canephora HOM05D006205 ORTHO05D007703 4.3e-182 641.3 359 81.3
Migut.K00057 Erythranthe guttata HOM05D006205 ORTHO05D007703 9.6e-182 640.2 357 82.4
TWI74G1063 Tripterygium wilfordii HOM05D006205 ORTHO05D007703 2.1e-181 639.0 340 87.4
AUR62024356 Chenopodium quinoa HOM05D006205 ORTHO05D007703 4.8e-181 637.9 360 81.7
ClCG10G017350 Citrullus lanatus HOM05D006205 ORTHO05D007703 8.1e-181 637.1 424 73.3
QL93p2022_0017 Quercus lobata HOM05D006205 ORTHO05D007703 8.1e-181 637.1 417 74.8
SalBow1G2518 Salvia bowleyana HOM05D006205 ORTHO05D007703 1.8e-180 636.0 401 75.1
Solyc03g064030.3 Solanum lycopersicum HOM05D006205 ORTHO05D007703 9.0e-180 633.6 361 80.3
Sopen03g017680 Solanum pennellii HOM05D006205 ORTHO05D007703 9.0e-180 633.6 361 80.1
Aa31LG3G6360 Aethionema arabicum HOM05D006205 ORTHO05D007703 4.5e-179 631.3 386 76.9
ATR0605G163 Amborella trichopoda HOM05D006205 ORTHO05D007703 4.9e-178 627.9 358 81.8
BraA03t12906Z Brassica rapa HOM05D006205 ORTHO05D007703 4.2e-177 624.8 358 81.6
Aqoxy1G00212 Aquilegia oxysepala HOM05D006205 ORTHO05D007703 9.3e-177 623.6 361 78.9
A03p37470 Brassica napus HOM05D006205 ORTHO05D007703 1.6e-176 622.9 358 81.3
BcaC01g04062 Brassica carinata HOM05D006205 ORTHO05D007703 2.1e-176 622.5 358 81.3
AUR62025960 Chenopodium quinoa HOM05D006205 ORTHO05D007703 4.6e-176 621.3 360 80.6
C03p45470 Brassica napus HOM05D006205 ORTHO05D007703 1.0e-175 620.2 358 81.0
BolC3t16816H Brassica oleracea HOM05D006205 ORTHO05D007703 3.0e-175 618.6 358 80.7
PSO384G4504 Papaver somniferum HOM05D006205 ORTHO05D007703 3.3e-174 615.1 357 79.6
unitig_899.g15081 Utricularia gibba HOM05D006205 ORTHO05D007703 1.1e-172 610.1 357 80.4
CDE10G0043 Ceratophyllum demersum HOM05D006205 ORTHO05D007703 6.9e-172 607.4 357 78.7
PSO339G0108 Papaver somniferum HOM05D006205 ORTHO05D007703 6.9e-172 607.4 357 79.0
Os02g0195000 Oryza sativa ssp. japonica HOM05D006205 ORTHO05D007703 1.9e-169 599.4 366 73.8
Zm00001eb236370 Zea mays HOM05D006205 ORTHO05D007703 3.2e-169 598.6 366 74.0
GSVIVG01033369001 Vitis vinifera HOM05D006205 ORTHO05D007703 4.6e-168 594.7 314 89.5
SEGI_33856 Sequoiadendron giganteum HOM05D006205 ORTHO05D007703 7.4e-166 587.4 357 76.5
BcaB04g18694 Brassica carinata HOM05D006205 ORTHO05D007703 1.7e-162 576.2 335 80.0
Nitab4.5_0000016g0140 Nicotiana tabacum HOM05D006205 ORTHO05D007703 3.2e-161 572.0 361 74.8
Cfa016888 Carpinus fangiana HOM05D006205 ORTHO05D007703 3.0e-159 565.5 302 88.1
ECA236G0538 Erigeron canadensis HOM05D006205 ORTHO05D007703 1.4e-156 556.6 314 84.1
MD12G1062300 Malus domestica HOM05D006205 ORTHO05D007703 4.2e-153 545.0 306 84.3
Rhsim04G0098500 Rhododendron simsii HOM05D006205 ORTHO05D007703 4.5e-147 525.0 403 65.3
Mapoly0096s0035 Marchantia polymorpha HOM05D006205 ORTHO05D007703 1.9e-145 519.6 358 67.6
Ah.13g076130 Amaranthus hybridus HOM05D006205 ORTHO05D007703 9.4e-145 517.3 352 71.9
SMO334G0020 Selaginella moellendorffii HOM05D006205 ORTHO05D007703 1.2e-144 516.9 357 68.3
Pp3c3_27370 Physcomitrium patens HOM05D006205 ORTHO05D007703 8.0e-144 514.2 357 67.5
AagrBONN_evm.TU.Sc2ySwM_228.3151 Anthoceros agrestis HOM05D006205 ORTHO05D007703 3.7e-141 505.4 358 67.3
CsaV3_3G039050 Cucumis sativus L. HOM05D006205 ORTHO05D007703 3.1e-132 475.7 252 88.9
CBR_g25855 Chara braunii HOM05D006205 ORTHO05D007703 4.5e-131 471.9 368 62.2
SalBow1G2557 Salvia bowleyana HOM05D006205 ORTHO05D007703 8.5e-130 467.6 365 63.8
Peaxi162Scf00285g00443 Petunia axillaris HOM05D006205 ORTHO05D007703 1.9e-129 466.5 361 64.5
COL.COLO4_36119 Corchorus olitorius HOM05D006205 ORTHO05D007703 6.1e-128 461.5 240 91.7
HPP92_023778 Vanilla planifolia HOM05D006205 ORTHO05D007703 1.2e-112 410.6 239 80.3
Dinv18116 Davidia involucrata HOM05D006205 ORTHO05D007703 1.4e-108 397.1 211 85.3
CARHR086730 Cardamine hirsuta HOM05D006205 ORTHO05D007703 9.5e-105 384.4 204 87.7
Glyma.02G176500 Glycine max HOM05D006205 ORTHO05D007703 7.6e-78 295.0 164 86.6
MBI04_g47239_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 2.4e-68 263.5 152 77.6
MBI04_g14269_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 5.8e-62 242.3 161 70.8
Actinidia33641 Actinidia chinensis HOM05D006205 ORTHO05D007703 3.5e-59 233.0 119 85.7
MD14G1062900 Malus domestica HOM05D006205 ORTHO05D007703 2.1e-56 223.8 126 81.0
MD14G1062700 Malus domestica HOM05D006205 ORTHO05D007703 1.8e-47 194.1 207 51.7
Cre02.g076150 Chlamydomonas reinhardtii HOM05D006205 ORTHO05D007703 9.1e-47 191.8 326 37.7
VMungo1080G0431 Vigna mungo HOM05D006205 ORTHO05D007703 4.5e-38 162.9 98 80.6
arahy.Tifrunner.gnm1.ann1.EV0IJD Arachis hypogaea HOM05D006205 ORTHO05D007703 4.4e-33 146.4 117 64.1
VMungo0331G0486 Vigna mungo HOM05D006205 ORTHO05D007703 3.0e-26 123.6 107 60.7
MD12G1062200 Malus domestica HOM05D006205 ORTHO05D007703 2.0e-25 120.9 59 89.8
Medtr0001s0010 Medicago truncatula HOM05D006205 ORTHO05D007703 2.3e-18 97.4 79 62.0
Glyma.02G176400 Glycine max HOM05D006205 ORTHO05D007703 6.3e-16 89.4 51 74.5
Rhsim04G0098400 Rhododendron simsii HOM05D000259 ORTHO05D000155 1.8e-15 87.8 39 94.9
BcaC01g04094 Brassica carinata HOM05D001227 ORTHO05D001082 9.1e-15 85.5 162 37.0
MCO07G325 Micromonas commoda HOM05D006205 ORTHO05D007703 8.0e-11 72.4 247 28.3


User provided reference genes

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