Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.016G047500 Populus trichocarpa HOM05D044698 ORTHO05D050439 0.0e+00 1402.5 978 100.0
Sabra16G0050900 Salix brachista HOM05D044698 ORTHO05D050439 5.4e-195 685.6 1070 52.9
Sabra06G0146700 Salix brachista HOM05D005101 ORTHO05D001271 2.2e-132 477.6 620 55.8
Potri.006G191500 Populus trichocarpa HOM05D005101 ORTHO05D001271 1.2e-122 445.3 700 48.6
TWI56G0322 Tripterygium wilfordii HOM05D005101 ORTHO05D001271 6.7e-20 104.0 246 49.2
Atru.chr13.27 Acer truncatum HOM05D005101 ORTHO05D001271 7.4e-19 100.5 254 52.0
TWI36G1399 Tripterygium wilfordii HOM05D005101 ORTHO05D001271 2.2e-18 99.0 247 49.4
Duzib268G0010 Durio zibethinus HOM05D005101 ORTHO05D001271 2.4e-17 95.5 263 41.8
Haze_22881 Corylus avellana HOM05D005101 ORTHO05D001271 1.5e-14 86.3 232 50.9
Manes.05G129900 Manihot esculenta HOM05D005101 ORTHO05D001271 2.5e-14 85.5 350 32.0
QL02p016087 Quercus lobata HOM05D005101 ORTHO05D001271 5.5e-14 84.3 244 48.8
Prupe.5G002400 Prunus persica HOM05D005101 ORTHO05D001271 2.1e-13 82.4 239 47.3
Gohir.A01G080000 Gossypium hirsutum HOM05D005101 ORTHO05D001271 6.1e-13 80.9 233 47.2
VMungo1215G2445 Vigna mungo HOM05D005101 ORTHO05D001271 6.1e-13 80.9 277 41.9
CSS0024940 Camellia sinensis var. sinensis HOM05D005101 ORTHO05D001271 8.8e-12 77.0 236 44.1
Dinv23351 Davidia involucrata HOM05D005101 ORTHO05D001271 1.1e-11 76.6 231 44.2
CiPaw.07G130900 Carya illinoinensis HOM05D005101 ORTHO05D001271 4.4e-11 74.7 246 44.7
Glyma.07G159600 Glycine max HOM05D005101 ORTHO05D001271 4.4e-11 74.7 130 50.0
CiPaw.08G078400 Carya illinoinensis HOM05D005101 ORTHO05D001271 1.3e-10 73.2 259 38.6
Ca_25723_v3 Cicer arietinum L. HOM05D005101 ORTHO05D001271 2.8e-10 72.0 147 51.0
Gohir.D01G067200 Gossypium hirsutum HOM05D005101 ORTHO05D001271 6.3e-10 70.9 233 39.5
GSVIVG01013451001 Vitis vinifera HOM05D005101 ORTHO05D001271 1.4e-09 69.7 134 51.5
Nitab4.5_0000694g0200 Nicotiana tabacum HOM05D005101 ORTHO05D001271 1.8e-09 69.3 142 49.3
Lalb_Chr04g0258871 Lupinus albus HOM05D005101 ORTHO05D001271 4.1e-09 68.2 145 49.7
Gorai.002G089100 Gossypium raimondii HOM05D005101 ORTHO05D001271 9.1e-09 67.0 233 37.8
Lj2g0011718 Lotus japonicus HOM05D005101 ORTHO05D001271 9.1e-09 67.0 146 49.3
Phvul.003G008900 Phaseolus vulgaris HOM05D005101 ORTHO05D001271 9.1e-09 67.0 277 40.1
TPR.G22374 Trifolium pratense HOM05D005101 ORTHO05D001271 9.1e-09 67.0 137 48.9
Dinv05511 Davidia involucrata HOM05D005101 ORTHO05D001271 1.6e-08 66.2 135 51.9
SalBow7G2128 Salvia bowleyana HOM05D005101 ORTHO05D001271 1.6e-08 66.2 140 45.0
Nitab4.5_0002112g0140 Nicotiana tabacum HOM05D005101 ORTHO05D001271 2.0e-08 65.9 142 49.3
MD06G1001600 Malus domestica HOM05D005101 ORTHO05D001271 4.5e-08 64.7 278 33.1
Psat6g132160 Pisum sativum HOM05D005101 ORTHO05D001271 4.5e-08 64.7 141 46.8
CsaV3_4G037750 Cucumis sativus L. HOM05D005101 ORTHO05D001271 1.3e-07 63.2 232 46.1
Cc10_g00130 Coffea canephora HOM05D005101 ORTHO05D001271 1.7e-07 62.8 135 49.6
CAN.G610.9 Capsicum annuum HOM05D005101 ORTHO05D001271 2.9e-07 62.0 136 44.9
RcHm_v2.0_Chr7g0217401 Rosa chinensis HOM05D005101 ORTHO05D001271 2.9e-07 62.0 234 44.4
Medtr1g035040 Medicago truncatula HOM05D005101 ORTHO05D001271 5.0e-07 61.2 150 46.0
Nn5g31073 Nelumbo nucifera HOM05D005101 ORTHO05D001271 5.0e-07 61.2 231 48.5
Ciclev10000062m.g Citrus clementina HOM05D005101 ORTHO05D001271 6.5e-07 60.8 229 38.0
arahy.Tifrunner.gnm1.ann1.CZE161 Arachis hypogaea HOM05D005101 ORTHO05D001271 1.5e-06 59.7 139 47.5
Actinidia33602 Actinidia chinensis HOM05D005101 ORTHO05D001271 1.9e-06 59.3 133 45.1
arahy.Tifrunner.gnm1.ann1.DXQU4L Arachis hypogaea HOM05D005101 ORTHO05D001271 1.9e-06 59.3 128 49.2
Thecc.07G035700 Theobroma cacao HOM05D005101 ORTHO05D001271 1.9e-06 59.3 137 47.4
MELO3C017068.2 Cucumis melo HOM05D005101 ORTHO05D001271 2.5e-06 58.9 232 45.3
Rhsim07G0258200 Rhododendron simsii HOM05D005101 ORTHO05D001271 2.5e-06 58.9 235 45.1


User provided reference genes

Program Settings